HHsearch 1.5 NAME c3ce8A_ FAM FILE c3ce8A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c3ce8A_.a3m DATE Fri Mar 12 12:55:33 2010 LENG 90 match states, 90 columns in multiple alignment FILT 21 out of 25 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.4427 1.5193 SEQ >ss_dssp CCSEEEEEEEEEGGGHHHHHHHHTTCTTCCCCEEEEEEEEECCEEEEEEEEEEEEEGGGHHHHHHHHHHHTTTSCCEEEEEECSCCCCCC >sa_dssp ECECCCAABCACDEBCEDACDCAEECECBEDDDDDECDBEDEEDEDDBADACACACDEDDEDACECBEECCEECECEDDCDECEEDEEEE >ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCC >ss_conf 986328989728889999999986086889812230013362190102456884383559999999998427898279971456445249 >Consensus xxxxxlLtLvxpxxlexxlvDxLlxxxxxsGFtxxxxxGhgxxGxxxxvxxxvxxxxxxxxxLlxaLrxxxxxxxixYWixPVxexGxlx >c3ce8A_ XSTEQLLVLIAQNDIKDDIVDTLIELEFLSGFSLGNICGFSREGYREFCKFEIXHPAAQQAALLTALALVCKHNPCRYWIXPIYQNGTLS >UniRef50_A3UEK2(8-102:103) Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEK2_9RHOB E=6e-18 s/c=0.97 id=26% cov=93% ------LSLVCPRDIKTALADILDDLtDAVPGYTMLPCEGRGAdmhlasagervRGAMQAVQFLMILPRGDVETILDTVAARCPRRQIAYWIEPVEEFGR L- >UniRef50_Q47C99(3-100:100) Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C99_DECAR E=1e-07 s/c=0.59 id=22% cov=92% ---DVLLTLIMPDDIAQHVEDLLLSRpDLVPGFTVSAAEGHGSvvplvedtelvAGHAPRTVIRTVGPETAKREVLALIKREMPNANVFYWLIPIIE--- -- >UniRef50_C5V795(5-103:103) Putative uncharacterized protein n=2 Tax=Gallionellaceae RepID=C5V795_9PROT E=3e-18 s/c=0.93 id=25% cov=94% ------LTLVCHKSQEERLVDHLLEHpDWVRGFSLTRIEGGSQkeklpsmleqvRGRSQRVQIVSVMNCDDAHELIAHLKRHEANPEIAYWMTPVIEFGR LA >UniRef50_B9MHZ2(9-109:112) Putative uncharacterized protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MHZ2_DIAST E=2e-16 s/c=0.86 id=24% cov=98% ---DCLLTLAVPAALEEDVLDLLRTLPHMaPGFTLVPAQGMGAhihlassmeqvQGRARRVLVQLAIVQTQVEPLIDALRKALPTPQIAYWAAPLLAFGR LG >UniRef50_Q0F3G7(2-102:102) Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G7_9PROT E=3e-15 s/c=0.82 id=24% cov=96% ----KMLNLVTHANMQHQLSDTLRDIEQVSGFTFTPVQGHGSHvdtdpflssrdrvvGYTPRIKVEVLLADDDVEPVLAHLREamINERNQGVYWVCRVD SSGRL- >UniRef50_D0KWR9(4-95:101) Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWR9_HALNC E=0.0002 s/c=0.51 id=23% cov=88% -----MLSLIARQSLEGELVDQLSELADYPLFLVSNVRGHNDthhglsvaeqvEGTAPLIRLSLFTDEPTANRIIDHLRANFRNAGIRWWRIPL------ - >UniRef50_Q2IS30(4-101:101) Putative uncharacterized protein n=5 Tax=Rhodopseudomonas palustris RepID=Q2IS30_RHOP2 E=4e-11 s/c=0.71 id=24% cov=94% -----MLTLVAPMALKEDLVAAMLAHgpTAQAGFVAREVEGCGDrvaydssiervRGHRLAVEIVVTAPEHDIRSLLDALRAGMAGRDVTWRIAAVTAAG TL- >UniRef50_C7RW58(2-100:100) Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RW58_9PROT E=1e-09 s/c=0.65 id=24% cov=99% --SELCLTLVCPPEVEEKLLDLLLLWPGATIFTSTATAAHGLAhesldqteqvlGRARATEVQVICAAAGQAALLAALRQQFSGVGLRYWVTPVVEAGEI A # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * X 1 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 1 * * * * * * * 0 0 0 S 2 * * * * * * * * * * * * * * * 0 * * * * 2 0 * * * * * * 1573 0 0 T 3 * * * * * * * * * * * 2755 * * * 721 2028 * * * 3 0 * * * * * * 2914 0 0 E 4 * * 898 2015 * * * * 3540 * * 2944 * * * * * * * * 4 0 * * * * * * 3490 0 0 Q 5 * 2893 * * * * * * 2397 3542 * * * 2300 * 3620 2766 2659 * * 5 0 * * * * * * 3768 0 0 L 6 * 4048 * * * * * 3826 * 777 2130 * * * * * * 4133 * * 6 0 * * * * * * 4376 0 0 L 7 * * * * 4095 * * * * 87 * * * * * * * * * * 7 0 * * * * * * 4663 0 0 V 8 * * * * * * * 4440 4100 * * 3268 * * * 2657 1221 2646 * 4493 8 0 * * * * * * 4663 0 0 L 9 * * * * * * * * * 0 * * * * * * * * * * 9 0 * * * * * * 4663 0 0 I 10 3799 * * * 4309 * * 1888 * * 3414 4095 * * * * * 1333 * 4100 10 0 * * * * * * 4663 0 0 A 11 1596 2772 * * 3218 * * 3398 * 4462 4274 * * * * * 3424 2939 * * 11 0 * * * * * * 4663 0 0 Q 12 4462 * 4309 * * * 3311 * * * * * 712 3766 4030 4100 * * * * 12 0 * * * * * * 4663 0 0 N 13 2502 * 4274 * * * * * 3373 * 3932 3766 2471 4030 2395 * 4095 4440 * * 13 0 * * * * * * 4663 0 0 D 14 2522 * 2085 2354 * * * * 4462 * * 4193 * * 3440 2705 4347 * * * 14 0 * * * * * * 4663 0 0 I 15 4493 * * * * * * 2497 * 1080 3250 * * 3260 4389 * * 4373 * * 15 0 * * * * * * 4663 0 0 K 16 4274 * * 1021 * * * * 1700 * * * * 4193 3425 * * * * * 16 0 * * * * * * 4663 0 0 D 17 3201 * 1690 1467 * 4030 4193 * * * * * * 4274 * * 4265 * * * 17 0 * * * * * * 4663 0 0 D 18 2764 * 1353 2826 * * 4274 * 3557 4493 * * 4699 4193 4440 * * * * * 18 0 * * * * * * 4663 0 0 I 19 * * * * * * * 2683 * 744 * * * * * * * 2016 * * 19 0 * * * * * * 4663 0 0 V 20 4265 * * 4274 * * * 4699 * 2595 * * * * * 4193 3418 878 * * 20 0 * * * * * * 4663 0 0 D 21 3932 * 168 4493 * * * * * * * * * * * * * * * * 21 0 * * * * * * 4663 0 0 T 22 2745 3201 * * 4462 * 4440 4265 4095 2183 * * * 4030 * * 2964 4389 3592 * 22 0 * * * * * * 4663 0 0 L 23 * * * * * * * * * 98 3932 * * * * * * * * * 23 0 * * * * * * 4663 0 0 I 24 * * 4265 * * * * 2054 * 1280 3368 * * * 3441 3230 * * * * 24 0 * * * * * * 4663 0 0 E 25 2428 * 3229 1694 * * * * * 3381 * * * 2691 * 4274 3382 * * * 25 0 * * * * * * 4663 0 0 L 26 * * 4347 * 3198 * 3164 4193 4440 1317 * * * 4462 2893 * * * 4373 * 26 350 2216 * 380 2110 * * 4663 2429 0 E 27 4030 * 1395 2449 * * * * * * * * 1992 * * 4095 3932 * * * 27 0 * * * * * * 4663 0 0 F 28 3089 * 3243 3635 3766 2189 4740 * * 4274 * * * 4193 * 3235 * 4347 4440 4100 28 67 4462 * 0 * * * 4663 1000 0 L 29 4373 * * * * * * 2390 * 2215 3754 * * 3932 * * 4462 1740 * 4030 29 166 3203 * 0 * * * 4663 1510 0 S 30 3932 * * * * * * * * * * * 1598 * 4440 1148 3227 * * * 30 0 * * * * * * 4663 0 0 G 31 * * * * * 167 * 4373 * 4030 * * * * * * * * * * 31 0 * * * * * * 4663 0 0 F 32 * * * * 77 * * * * * * * * * * * * * * 4265 32 0 * * * * * * 4663 0 0 S 33 * * * * * * * * * 4030 * 4095 * * * 2148 763 3932 * * 33 0 * * * * * * 4663 0 0 L 34 3932 * * * 4193 4699 * * * 1631 4265 * * * * 2849 4768 1781 * * 34 0 * * * * * * 4663 0 0 G 35 * * * * * 3766 4768 * 4095 2442 * * * * 3932 1973 2346 3799 * 4100 35 0 * * * * * * 4663 0 0 N 36 3322 * 2724 3932 * * 4347 * * * * 2892 1746 * 4440 4440 3198 * * * 36 0 * * * * * * 4663 0 0 I 37 1706 3287 * * * 4859 * 2081 * * * * * * * * 4373 1879 * * 37 0 * * * * * * 4663 0 0 C 38 2823 3766 4100 1919 4309 * * * * * * 4440 * 2982 4030 2840 * * * 4699 38 0 * * * * * * 4663 0 0 G 39 4373 * * * * 71 * * * * * * * * * * * * * * 39 0 * * * * * * 4663 0 0 F 40 * 3932 * * 2120 4440 1071 4859 * * 4740 * * * 4265 * * * * 4095 40 0 * * * * * * 4663 0 0 S 41 * * * * * 953 * * * * * 4030 * * * 1423 4347 * * * 41 0 * * * * * * 4663 0 0 R 42 3483 * 2980 * * 4347 * * 4095 4373 * * * 4440 1374 2350 * * * * 42 1685 537 * 3459 138 * * 4663 4307 0 E 43 2792 * * 1649 * * 4193 * 4462 * * * * 2594 1883 * * * * * 43 463 1864 * 3530 131 * * 4663 2825 0 G 44 * * * * * 0 * * * * * * * * * * * * * * 44 0 * * * * * * 4663 0 0 Y 45 3180 * * * 4389 4309 2621 * * * * * * * 1392 * 4030 * * 2421 45 0 * * * * * * 4663 0 0 R 46 1845 * * * * 3566 * * * * 4265 * * 3564 1707 3466 4193 4347 * * 46 0 * * * * * * 4663 0 0 E 47 3393 * 2814 3766 * * 4309 * * 3932 * * 2577 3350 1702 * * * * * 47 0 * * * * * * 4663 0 0 F 48 2592 * * * 2921 * * * * 4030 3201 * * 4462 1187 * * * * 4389 48 0 * * * * * * 4663 0 0 C 49 4699 3766 * 4389 * * * 3109 * 4309 4100 * * * 4347 * 3322 1293 * 4095 49 0 * * * * * * 4663 0 0 K 50 * 4768 * 3135 * * 4462 4699 2485 3104 4100 * * 2303 3198 * * 3310 * * 50 0 * * * * * * 4663 0 0 F 51 4100 * * * 1726 * * 1884 * 3163 * * * * * * * 1961 * * 51 0 * * * * * * 4663 0 0 E 52 * * * 1543 * * * * * 3466 3466 * * 2595 3500 4030 * 3164 4347 * 52 0 * * * * * * 4663 0 0 I 53 * * * * * * * 3073 * 2476 3350 * * * * 4440 4274 984 * * 53 0 * * * * * * 4663 0 0 X 54 3173 * * * 4012 * 3418 2215 * 2211 4308 * * 4660 * * 3915 2777 * * 54 0 * * * * * * 4649 0 0 H 55 3164 2696 * * * 4274 3012 2785 * 2101 3635 * * * * * 3326 * * * 55 0 * * * * * * 4663 0 0 P 56 2633 * 3198 3512 * * * * * * * 3373 1355 3813 * 4440 * 4740 * * 56 0 * * * * * * 4663 0 0 A 57 2126 4440 4193 2487 4440 4462 4859 * * 3280 * * * 4740 4265 3008 * * * 4347 57 0 * * * * * * 4663 0 0 A 58 2016 * 2653 2856 * 4265 3932 * * * * * 4030 * * 2951 2760 * * * 58 0 * * * * * * 4663 0 0 Q 59 3500 * 1394 * * 3406 * * * * * * * 2362 * 3536 4030 4493 * 4309 59 0 * * * * * * 4663 0 0 Q 60 1806 * * * * * * 3011 4274 2922 * * * 2561 * * * 2078 * * 60 0 * * * * * * 4663 0 0 A 61 3563 * * 2073 * * 4440 * 3235 * * 4030 * 2287 2314 * 4100 * * * 61 0 * * * * * * 4663 0 0 A 62 2225 * 4440 3355 * 4309 * * * * * * 2615 3216 2600 3265 4265 * * * 62 0 * * * * * * 4663 0 0 L 63 * * * * * * * 2543 * 684 4309 * * * * * * 2685 * * 63 0 * * * * * * 4663 0 0 L 64 * * * * * * * 2140 4095 824 * * * * 4100 * * 3451 * * 64 0 * * * * * * 4663 0 0 T 65 1359 * 1580 4100 * 4768 * * * * * * * 3348 * * 3601 * * * 65 0 * * * * * * 4663 0 0 A 66 1228 * * 3595 * * 2244 * * 4274 * * * 4462 * 4095 3532 4750 * * 66 0 * * * * * * 4663 0 0 L 67 * * * * * * * 4274 * 218 * * * * * * * 3495 * * 67 0 * * * * * * 4663 0 0 A 68 2557 * * * * 4389 4699 * 2364 * * 4095 * * 1208 4100 * * * * 68 0 * * * * * * 4663 0 0 L 69 1735 * * 2768 * 4440 4462 * 4740 4783 * * 4095 2683 2890 * 4699 * * * 69 81 4193 * 1000 1000 * * 4663 1000 0 V 70 3203 * * 2893 * 3932 4440 3143 4440 3201 4389 4030 * 4373 3305 4462 * 3766 * * 70 0 * * * * * * 4663 0 0 C 71 * 2442 * 4440 2027 * * 4347 * 3203 2683 2613 * * * * * 4389 * * 71 0 * * * * * * 4663 0 0 K 72 2279 * * 4193 4100 3348 * * 4783 * * * 2236 3386 3243 2912 * * * * 72 0 * * * * * * 4663 0 0 H 73 * * 3595 * * 2046 3766 * 4100 * * 2653 4095 * 2287 3581 4740 * * * 73 0 * * * * * * 4663 0 0 N 74 2020 4462 4389 4100 * 4493 * * * * * 2485 3084 * 3089 4347 4440 4373 * * 74 0 * * * * * * 4663 0 0 P 75 4309 * 2652 4440 * 2365 4389 * 4095 * * 2902 2923 2486 * * * * * * 75 0 * * * * * * 4663 0 0 C 76 * 3766 * * 4389 4193 * 1457 * 2089 * * * * * * * 2154 * * 76 0 * * * * * * 4663 0 0 R 77 2557 * * * 3500 * 2955 * 4095 * * * * * 1364 * 3932 3321 * * 77 0 * * * * * * 4663 0 0 Y 78 * * * * * * * * * * * * * * * * * * 2507 279 78 0 * * * * * * 4663 0 0 W 79 * * * * * * * 4440 * * * * * * 3932 * 4309 4100 359 * 79 0 * * * * * * 4663 0 0 I 80 4740 * * * * * * 1802 * 2317 3260 * * * 4030 * * 1692 * * 80 0 * * * * * * 4663 0 0 X 81 2729 4157 * 3281 * * * 3126 * 3352 3473 * * 4055 * * 2019 3629 * * 81 0 * * * * * * 4649 0 0 P 82 3932 * * * * * * * * * * * 373 * 4193 3218 * * * * 82 0 * * * * * * 4663 0 0 I 83 * * * * * * * 2546 * 2263 * * * * * 4493 * 796 * * 83 0 * * * * * * 4663 0 0 Y 84 3273 * 4131 3113 4211 * * 2288 * 1912 * * * 4674 * * 3834 4270 * 4708 84 0 * * * * * * 4460 0 0 Q 85 2625 * 2703 1102 * * * * 4396 * * * * 3691 * 4131 4781 * * * 85 0 * * * * * * 4460 0 0 N 86 2089 4506 * 4160 2036 * * * * * * 4644 * 4245 * 2155 4592 3997 * * 86 0 * * * * * * 4377 0 0 G 87 * * * * * 88 * * * * * * * 4072 * * * * * * 87 0 * * * * * * 4271 0 0 T 88 * * * 3956 * * 3799 * * 3954 * * * * 1032 3909 2038 * * * 88 0 * * * * * * 4125 0 0 L 89 * * * * * * * 1603 * 704 * * * * * * * 4137 * * 89 0 * * * * * * 4125 0 0 S 90 1193 * * * * 1844 * * * * * * * * * 1816 * * * * 90 0 * * 0 * * * 3058 0 0 //