HHsearch 1.5 NAME c3bs5A_ FAM FILE c3bs5A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c3bs5A_.a3m DATE Tue Mar 9 13:30:53 2010 LENG 86 match states, 86 columns in multiple alignment FILT 101 out of 743 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.1 EVD 0.4364 0.3667 SEQ >ss_dssp CCCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >sa_dssp EDDACECDCECACEBADECADDCEEBBDCACEDEBCAECBDEBDDDBADEBDAEDEECBCBACECADDBCEDCEEDCEDDEDEEEE >ss_pred CCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >ss_conf 98844688999999999808998999999999339999999826999997589997899999999999964543122213553379 >Consensus pkpvxxWtxxxVxxWLxxxxxxxxxyxxxFxxxxIxGxxLxxlxxxdLxxlGIxxxxxrxxilxxIxxLkxxxxxxelxxxxxxxx >c3bs5A_ PKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRXGVTDNRDREAIWREIVKQRLKTDIXEIRDXERLNI >UniRef50_UPI000186EF16(891-963:968) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186EF16 E=9e-06 s/c=0.71 id=19% cov=84% ------WTVDDVVQFL--NVNDCSAYSENFINQGTDGKSLLSLTKDQIMDVIGFKIGPTLKIYHLIQQLKIKSQKANLK------- >UniRef50_A9V3M6(47-125:1284) Predicted protein n=2 Tax=cellular organisms RepID=A9V3M6_MONBE E=3e-07 s/c=0.71 id=14% cov=90% --PLGQWPTSRVVDWLA--MNGFDDFVDSFQMFHLNGDHLQNMKVNDFNRVGSQPMARRKQLVKAVARLvKQQNEIVKLTA------ >UniRef50_UPI00016E0F65(6-63:176) UPI00016E0F65 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E0F65 E=3e-05 s/c=0.86 id=21% cov=67% -----------ILEWLSKL--HLAQYVESFLDNGYDDLEVCkQIGEPDLDAIGVHIEYHRHRLLSAVQKLR---------------- >UniRef50_UPI000186DE7A(28-104:237) hypothetical protein Phum_PHUM504290 n=1 Tax=Pediculus humanus corporis RepID=UPI000186DE7A E=0.0007 s/c=0.59 id=19% cov=80% ------------------HGMNMGKYLNNFVNLNMSLTTFLNMTDDDLFNVGINDGNDRKVILDNLKVHKNYGENCHIPESHSQDL >UniRef50_P39969(260-345:1040) Protein BOI2 n=5 Tax=Saccharomyces cerevisiae RepID=BOI2_YEAST E=1e-06 s/c=0.63 id=19% cov=99% PVEAEFWSPEEITAYFIMEGYDVQS-ASRFQKHKISGKILLELELVHLKELDINSFGTRFEIFKEIEKIKeaIRTNGRSLNRASKTN- >UniRef50_A0C082(11-91:366) Chromosome undetermined scaffold_14, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C082_PARTE E=3e-06 s/c=0.65 id=20% cov=95% PKDPKKWKLDDVTIWLK--FIGLQDLDVNFRQNSVDGALLSTLDDNDLKEMGIAESSLKIKKLVQWIKIGFKEYSEFLKSLEK--- >UniRef50_B4J5Z3(355-410:981) GH21106 n=2 Tax=Drosophila RepID=B4J5Z3_DROGR E=8e-05 s/c=0.86 id=21% cov=50% ----------------------------LLEQNYKTVRDVTQVTWEDLEDIGIVKLGHQKKILLAIKRVK---------------- >UniRef50_Q4XW94(272-338:857) Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4XW94_PLACH E=0.0003 s/c=0.69 id=20% cov=77% -----LWNKEQVAHWL-SLCSVPMKWVVSVYKNNITGHKLNNINLHYIRnKLGILPYGQAIKLLQLIKNLRV--------------- >UniRef50_C4QB78(1657-1724:2086) Lar interacting protein (Lip)-related protein n=1 Tax=Schistosoma mansoni RepID=C4QB78_SCHMA E=8e-05 s/c=0.71 id=14% cov=41% -----------------------------------SGAIMASLSEQEIQrEIGISNPLHRLKLRLAIQEM----------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 4534 0 0 K 2 * * 3708 3181 * * * * 876 * * 4585 4647 * 2792 * * 4555 * * 2 0 * * * * * * 6034 0 0 A 3 3774 * 4442 4339 * 5294 5273 * 5113 * * 5199 707 5253 5566 5759 4454 * * * 3 0 * * * * * * 6727 0 0 V 4 3841 * * * 4134 * * 2820 * 2494 4597 * 4803 * * * * 1068 * * 4 0 * * * * * * 6451 0 0 Y 5 3356 5238 5627 3031 5396 4211 3557 * 2916 3412 * * * 4252 5604 2699 3936 * * 4273 5 34 * 5445 * * * * 6451 0 0 L 6 3958 * 3148 2592 4104 5253 5489 * 4634 3083 * 4322 * 2826 3100 3979 * * * 5583 6 0 * * * * 0 * 6707 0 1000 W 7 * * * * * * * * * 4645 * * * 4904 * * * * 110 * 7 0 * * * * * * 6799 0 0 T 8 6566 * 2904 * * 5070 * * 4332 * * 3877 5572 * 5790 1653 1509 * * * 8 0 * * * * * * 6791 0 0 V 9 3447 6268 * 3957 6429 5921 * 5971 3217 4097 * 5708 2797 * 6423 3534 3034 2072 * * 9 0 * * * * * * 6825 0 0 S 10 4369 * 2045 1850 5740 5542 4413 5307 4994 * * 4000 4017 5363 6088 3777 4791 * * 5975 10 0 * * * * * * 7115 0 0 D 11 5076 * 1447 2141 * * 3587 * 5598 * 5191 4431 * 2931 4670 * 5115 * * * 11 0 * * * * * * 7115 0 0 V 12 5146 6290 * * 4993 * * 3410 * 4600 * * * * * 5434 5143 433 * * 12 0 * * * * * * 7190 0 0 L 13 2390 3446 4666 5334 * 4558 4135 * 4311 3250 6456 * 5720 4688 4712 4037 4776 2865 * 4150 13 0 * * * * * * 7190 0 0 K 14 3139 6437 3574 3076 * 4942 4190 4982 4357 4726 * 3738 * 2461 4593 3472 5701 4433 * 6247 14 20 6147 * 0 * * * 7182 1000 0 W 15 * * * 5860 2880 * * * * * * * * 5436 * * * * 374 4263 15 0 * * * * * * 7182 0 0 Y 16 * * * * 4796 * * 2975 * 474 3953 * * * * * * 4669 * 6261 16 163 6287 3407 3700 115 * * 7182 1000 0 R 17 4333 * 3456 2375 * 5975 5074 4067 2848 4947 * 5369 * 3972 2495 3951 4060 * * * 17 255 * 2628 * * 1569 593 7201 0 3579 R 18 3317 * 3855 3502 * 3631 5821 5941 3450 5288 5889 5037 * 4884 3229 2113 4163 4812 * * 18 345 * 2233 * * 1286 761 6959 0 5223 H 19 5970 5484 * 3990 * 5873 3259 4776 4687 1253 5731 4676 5965 4902 6030 4287 4051 4941 * 6004 19 296 * 2430 * * 1416 678 6966 0 5649 C 20 3723 4149 2810 * 4078 1848 5491 5782 * 5581 5347 4361 5917 5765 3169 5836 4305 4659 * * 20 142 5476 3806 0 * 798 1235 6943 1000 5836 G 21 3414 * 4395 6564 3801 4573 * 2825 * 3732 4541 3919 3302 5680 * 3634 3849 4113 * 3639 21 29 5641 * 1585 585 397 2055 7018 1000 4946 E 22 6401 5464 2414 4294 * 1847 5065 * 3918 * * 3348 * 3913 4980 3511 * 4630 6228 6048 22 82 * 4182 * * 283 2491 7410 0 2545 Y 23 6086 3415 6222 6439 2258 * 5248 4628 5286 1886 2937 * 4648 * * 4773 * 4511 * 4517 23 21 6135 * 0 * 624 1509 7366 1000 2901 T 24 2802 * 3949 2650 * 2966 6584 5626 4432 4775 5918 6469 4068 3229 6880 2932 6225 5852 * 5228 24 42 5133 * 0 * 861 1154 7358 1705 1490 Q 25 4023 * 3915 3309 6143 6253 3459 6337 3010 5571 6490 4482 5008 2146 4047 3682 5732 5890 * 6835 25 28 * 5693 * * * 0 7578 0 1000 Y 26 6364 6495 * 6495 3825 * 3973 5223 * 3054 6519 * * 6360 * * * 3751 5949 809 26 0 * * * * 489 1799 7517 0 2087 E 27 2299 4213 5530 4129 5983 4537 6463 3995 5147 3862 7044 4795 * 4551 4409 3337 4516 2796 * 6135 27 17 6429 * 1000 1000 * 0 7512 1000 1000 Q 28 4124 * 2632 2077 * 4492 5339 * 3252 5717 * 4465 3114 4477 * 4032 5837 4692 * 5147 28 0 * * * * * 0 7512 0 1000 L 29 4148 6450 4843 4995 6203 5988 5654 3466 4174 3044 6828 2568 5190 5142 4709 2892 4385 3655 * 5952 29 0 * * * * 0 * 7514 0 1000 F 30 * 4870 * * 480 * * 4339 * 3333 3689 * * * * * * 5457 * * 30 16 6489 * 0 * * * 7535 1000 0 A 31 3537 * * 3257 6557 * 5542 3308 4065 2520 6571 6713 * 3725 2385 5406 4004 4487 * 5354 31 33 6846 6192 3000 193 * * 7535 1000 0 Q 32 4212 * 3079 2217 * 4997 6419 6707 3010 5558 5855 3773 * 3156 2995 4273 6290 * * 5501 32 33 * 5447 * * * 0 7515 0 1000 H 33 4592 * 4939 3670 4634 6512 2612 * 5026 5289 6155 1770 * 2959 4839 5283 6764 * 5417 4404 33 0 * * * * 585 1585 7480 0 2299 D 34 4636 * 2780 3082 6448 2607 4651 4664 4119 4762 6342 3080 * 3950 3171 5501 * * * 5766 34 0 * * * * * 0 7502 0 1000 I 35 * * 6477 * 4885 * * 1022 4315 4501 5265 * * * * * 5696 1834 * 4560 35 10 7127 * 0 * * 0 7502 1000 1000 T 36 6676 4882 1487 * * 6348 6689 * 4698 * * 2813 * * 5482 3316 1868 * * * 36 12 6942 * 0 * 0 * 7502 1000 1000 G 37 6650 * 6280 * 6306 422 * 6134 * 3823 5548 6713 5564 * * 6583 * 5049 5870 5411 37 15 6583 * 0 * * * 7535 1000 0 R 38 3300 * 2727 2824 5365 5456 5395 5134 3378 4882 * * 4814 3816 2380 4169 6380 6571 * * 38 0 * * * * * * 7535 0 0 A 39 3055 6784 3696 4021 * 5763 3742 5795 3847 3127 4619 5873 * 4639 4884 3768 3692 2852 * 5992 39 0 * * * * * * 7535 0 0 L 40 * * * * 3723 * * 4322 * 325 5411 * * * * * * 4257 * * 40 16 6488 * 1000 1000 * * 7535 1000 0 L 41 3988 4231 5498 4806 6418 * 6294 4506 5469 1552 3349 5999 4347 4413 * 4099 5562 3447 * 6306 41 46 4991 * 0 * * * 7535 2210 0 R 42 3305 6042 4049 3386 * 4486 4522 * * 3791 4660 2763 * 3481 3874 3813 3166 6604 6844 5575 42 29 5630 * 1168 850 * * 7537 1672 0 I 43 5502 6827 * * 5036 * * 2350 * 1047 2395 * * 6505 * * * 4856 5443 * 43 23 5983 * 1585 585 * * 7537 1000 0 T 44 7446 * 2244 3588 * 5109 6464 * 4137 * 6199 3282 * 5134 4168 3967 1563 * * * 44 22 6040 * 0 * * * 7537 1620 0 D 45 4578 * 2408 2733 5374 5588 4209 4679 3273 5122 4591 4650 4101 4471 4287 4100 5597 5312 6776 * 45 18 6364 * 0 * * * 7537 1000 0 S 46 4022 * 2657 2035 * 6493 4370 6533 3890 6558 * 3663 6298 2907 5807 3676 5205 5196 * 6364 46 0 * * * * * * 7537 0 0 S 47 5577 * 1208 3096 5388 5479 5248 5523 3883 5313 6255 * * 4166 4719 4594 3903 * * 5220 47 25 5876 * 520 1724 * * 7537 1734 0 L 48 * * * * 3617 * * 3139 * 437 5093 * * * * * * 6281 6634 6168 48 53 4798 * 0 * * * 7537 2294 0 Q 49 4682 * 4487 2332 6372 6162 6162 4069 1998 3874 5164 4458 5791 4981 3685 6509 3789 6555 * 7680 49 72 4351 * 0 * * * 7587 2947 0 R 50 3022 * 2728 1745 * 5665 6745 * 3036 * * 4200 * 4224 3422 5559 4536 * * 6489 50 192 3007 * 102 3878 * * 7575 4276 0 X 51 6832 6154 * * 4319 * * 2665 * 1060 2762 6557 * 6216 * 5389 * 3819 * 5416 51 0 * * * * * * 7423 0 0 G 52 6630 * 3813 6003 * 336 6292 5745 5615 * * 5476 * * * 5986 5566 * * * 52 0 * * * * * * 7416 0 0 V 53 * * * * * 4983 * 1108 * 3778 4632 * * * * 5874 * 1418 * * 53 0 * * * * * * 7416 0 0 T 54 4109 * 3887 3538 5716 3907 4156 6653 3743 5078 * 3890 * 4020 4236 3649 2238 4098 * * 54 16 * 6493 * * * * 7379 0 0 D 55 3929 * 3461 5224 6156 5634 * 5453 2485 5365 * 2359 4216 5570 4248 2627 4350 5398 * * 55 34 * 5424 * * 0 * 7366 0 1000 N 56 3696 * 5345 3607 4268 4010 6177 3893 3919 2671 5750 5801 4112 4945 5333 4195 4735 3065 * 4849 56 37 6177 6428 0 * 0 * 7358 1000 1551 R 57 4213 * 3628 3867 4667 1286 5430 4295 5442 3951 6175 4892 5124 6510 7114 4460 5766 6108 * 6289 57 0 * * * * 0 * 7373 0 1000 D 58 4910 * 2259 4233 * * 1550 6180 4991 5911 6658 6462 4252 3831 4177 5881 4400 4727 * * 58 0 * * * * * * 7379 0 0 R 59 4317 6293 * * * * 6348 5061 3277 5580 * * * 2638 882 6215 5716 4834 * * 59 0 * * * * * * 7379 0 0 E 60 3903 * 5806 3698 6101 6497 3747 3853 2539 2874 5320 4581 * 3554 3268 4469 5416 4791 * * 60 0 * * * * * * 7379 0 0 A 61 3394 * 5532 4144 * * 5994 4303 1559 4469 5863 * * 4682 2731 4052 4349 4065 * * 61 0 * * * * * * 7379 0 0 I 62 * 6317 * * 4674 * * 1230 5911 1491 5365 * * * * * 4992 3413 * * 62 16 * 6492 * * * * 7379 0 0 W 63 5524 * * 6652 3893 5355 * 4629 4168 986 4399 6789 * 6173 4533 6628 5736 4191 4075 5705 63 0 * * * * 0 * 7363 0 1000 R 64 4447 * 4018 4193 * 6715 4063 6668 2466 3872 5151 4016 * 3187 2544 3836 5054 4720 * * 64 0 * * * * * * 7437 0 0 E 65 1677 6346 6130 2798 * 4125 4461 5411 3883 3582 5762 4131 * 4502 5718 3939 * 6236 6376 6616 65 0 * * * * * * 7490 0 0 I 66 4798 6029 * * * * * 805 * 2413 * * * * * * * 2544 5859 * 66 32 5519 * 1523 617 * * 7490 1579 0 V 67 4335 6595 4050 2926 * 5574 5462 5051 2061 5411 * 4291 * 2688 3438 5152 5933 5291 * 4554 67 0 * * * * * * 7272 0 0 K 68 3921 * 4583 3047 6109 5148 4292 * 2836 4493 * 3461 * 2704 2907 5432 5104 4534 * 5635 68 40 6267 6094 0 * * * 7243 1000 0 Q 69 6012 6429 * 4748 * * 5899 3354 * 638 3741 6266 * 4964 * * 5624 4705 * * 69 85 4130 * 1058 945 * 0 7107 2353 1000 R 70 * 6074 6206 6089 * 5575 * 6260 1410 5102 * 4912 * 3261 1462 5881 * * * * 70 115 3711 * 2003 414 0 * 7081 2868 1000 L 71 4291 * * 4652 4598 5703 4855 3881 4334 3091 4482 3540 5640 4151 4031 3449 4804 2591 5820 * 71 0 * * * * * * 7166 0 0 K 72 3730 * * 4937 5831 * * * 2021 5847 * 5661 3999 2755 2563 3194 * * * 3296 72 37 5317 * 0 * * * 7065 1000 0 T 73 3551 * 3981 2814 * 5460 3047 5805 5835 5857 * 3961 4441 5364 * 2262 3170 4731 * 5575 73 29 5661 * 0 * * * 6961 1000 0 D 74 5505 * 1849 1485 * 5990 * 5645 3941 * * 3511 5336 4434 5859 * 5557 5894 * 5147 74 0 * * * * * * 6886 0 0 I 75 * * 3396 * 4224 3968 * 3035 3167 4114 4463 4059 5267 * 4260 4208 3709 2640 * 5504 75 147 4264 4477 1541 608 * * 6908 1627 0 X 76 4142 4973 2708 3603 5244 5207 5210 5133 3510 3644 * 3790 4153 4123 4312 4188 5346 4225 * 5044 76 0 * * * * 0 * 6789 0 1477 E 77 5058 * 4213 1048 5011 * 5072 * 3766 5331 4971 3853 * 5235 5232 4471 4362 5298 * * 77 35 * 5364 * * * * 6903 0 0 I 78 * * 5322 * 4800 * * 2427 5520 1018 5127 * * 4079 5408 3315 * 5275 * * 78 39 * 5222 * * 0 * 6836 0 1000 R 79 * * * 3533 * 4898 * 4909 3445 5105 * 4150 3603 2498 2053 2916 4759 * * * 79 0 * * * * 0 * 6750 0 1000 D 80 3181 * 1599 3056 * * 5005 * 4490 * * 2859 * * 3172 3652 4818 * * * 80 0 * * * * * * 6393 0 0 X 81 3198 * 4068 4211 * * * 4180 4153 3273 4222 4109 4326 4360 4463 3928 2369 * * 4387 81 0 * * * * * * 5831 0 0 E 82 * * * 1359 * * 3982 * 3407 * * 4210 * 2729 * 3335 2749 * * * 82 0 * * * * * * 5952 0 0 R 83 * * 3225 * * * * * 1332 3163 * * * * 2714 2109 * * * * 83 0 * * * * * * 5814 0 0 L 84 4176 * * 3746 * * * * * 1368 2960 * * 2256 * 3727 3847 * * * 84 0 * * * * * * 5393 0 0 N 85 * * 1382 3460 * * * * 3648 * * 1495 3456 * * * * * * * 85 0 * * * * * * 4736 0 0 I 86 * * * * * * * 516 * 2721 * * * * * * * 2745 * * 86 0 * * 0 * * * 3735 0 0 //