HHsearch 1.5 NAME c3bb5B_ FAM FILE c3bb5B_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c3bb5B_.a3m DATE Wed Mar 10 23:28:17 2010 LENG 103 match states, 103 columns in multiple alignment FILT 105 out of 264 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.1 EVD 0.4310 -0.0154 SEQ >ss_dssp CCEEEEEEECBCSTTHHHHHHHHHHHHHHHGGGCTTEEEEEEEECCCTTSSCTTCCEEEEEEESSHHHHHHHHHCHHHHHHHHHHHHHBTTGGGGEEEEE EEC >sa_dssp EDBDBCBCABCEEECBDEDADDAAECBDDBBEEBECBEDBECCDCEBEEEECEECDBBBCABADDEEBBDDBCECEDCDEACDCBDEBBDECEEACDDDD EEE >ss_pred CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE EEC >ss_conf 9559999999869999999999999999886408640023203678821033780089999988989999871798999999999997310028378988 739 >Consensus gxIxHiVlfkxkxxxxxexxxxxxxxlxxLxxxiPxixxxxxGxxxxxxxxxxxxxxxlxxxFxxxxxlxxYxxhPxHxxxxxxlvxxxxxxxxxvxvxD xev >c3bb5B_ GXLYHLVXLEPEGEGAXDRIXEAXAILDGLAPELPGLTEFRHGPNRDFEQKSERYPYGFLCTFTDKAALDAYAVHPTHQRAGGXLVASCRNGADGILVVD LEV >UniRef50_Q4P3Q8(3-107:107) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P3Q8_USTMA E=7e-10 s/c=0.62 id=16% cov=95% --VIHVVSFKYKESVSSQERLELYSQFGTFKTQClytdnqPYILGLKSSTeNTSPENAGKGFHHIFITTFPSQDHVKYYLDkDPVHLAF----VDKVKAA LDDVFIYDFDV >UniRef50_UPI000161F499(146-241:252) predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI000161F499 E=1e-09 s/c=0.66 id=15% cov=77% --IEHVVLIKVREGAILDGTEGMIEAFNALPQQIGPSVIVQLTAGTNLSDRNKGYTHGVLVRVPSEEALTTFSKHPAYVR-------------------- --- >UniRef50_UPI00017462C1(35-134:137) hypothetical protein VspiD_01730 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017462C1 E=6e-12 s/c=0.72 id=18% cov=81% GKIHHTGYIWLKEPGNKEHQQRIIDAAHRFAAQIPEVKGLSVGKSVPKGSplMDTTFDVSLTMHFDDQAAMERYNKHPVHEKAA---------------- ----- >UniRef50_Q0K4G8(100-176:219) Putative uncharacterized protein h16_B0306 n=5 Tax=Burkholderiaceae RepID=Q0K4G8_RALEH E=1e-06 s/c=0.70 id=13% cov=29% --------FRVRPEAPDRQVRALEQDLLRMPGYMPGI--------------------------------------------------------------- --- >UniRef50_A1T9D7(2-88:97) Stress responsive alpha-beta barrel domain protein n=2 Tax=Mycobacterium RepID=A1T9D7_MYCVP E=2e-08 s/c=0.69 id=15% cov=78% --IRHVVLAKFKTGYDAAEVRRLQDGFRAL--NCPGTVRYTVGSDAGL--REGNWDFAIVADFEDADAFRGYDEDAAHGELRSRL--------------- --- >UniRef50_Q97LN9(2-93:94) Uncharacterized conserved protein n=1 Tax=Clostridium acetobutylicum RepID=Q97LN9_CLOAB E=6e-08 s/c=0.64 id=17% cov=90% --LTHIVFFKLHDK---KDVGKVKQILESIEGNVEFARKVKVGIDVVHSKRA--YDIALIVKFDSLKDMETYQVHPYHVDV---VIKNTKDLIQSSVSVD FE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4159 0 0 X 2 2968 * * * * 3024 * * 2576 3187 * * 2117 2984 * * 3122 * * * 2 0 * * * * * * 3862 0 0 L 3 * * * * * * * 832 * 2103 6119 * * * * * * 2546 * 5668 3 0 * * * * * * 6976 0 0 Y 4 4608 5403 6211 4242 * * 4083 4478 3475 * 5099 6424 * 3721 1687 * 4736 2864 * 3773 4 0 * * * * * * 7034 0 0 H 5 * * * * * * 47 * * * * * * * 4959 * * * * * 5 0 * * * * * * 7292 0 0 L 6 5979 4607 * * 5053 6187 6016 1516 * 4840 4650 * * 6384 * 4910 3629 1584 * * 6 11 7049 * 2322 322 * * 7360 1000 0 V 7 3741 6022 * * 5724 6434 * 4790 * 4058 * * * * * * * 353 * * 7 0 * * * * * * 7356 0 0 X 8 4626 4599 * * 2696 * 6250 4112 * 1396 3128 * * 7157 5223 4466 4247 6632 * 4142 8 0 * * * * * * 7341 0 0 L 9 5316 6640 * * 823 * * 3146 * 3596 5085 * * * * * * 3601 3700 6032 9 0 * * * * * * 7365 0 0 E 10 4646 * * 4443 * * * * 1262 * * 5136 7020 5099 2706 3468 3289 * 3540 * 10 27 * 5750 * * * * 7365 0 0 P 11 4259 * * * 1396 * * 4657 * 1625 5551 * 6347 * * * 5803 3814 4250 5121 11 10 7251 * 1000 1000 963 1038 7348 1000 1636 E 12 4530 * 4498 4463 * 5378 5527 * 837 * * 4333 4991 5518 3413 7320 4365 6660 * * 12 41 5170 * 1700 531 * 0 7366 2289 1000 G 13 3423 * 1971 2157 * 5346 5659 * 5602 6375 * 4643 2224 5650 6184 4736 5316 * * * 13 0 * * * * 0 * 7366 0 1000 E 14 4935 * 2309 2856 6157 2209 6782 6815 4415 6835 * 3949 3333 6852 5900 3674 4167 * * * 14 61 6164 5198 0 * * * 7365 1000 0 G 15 2641 6880 5968 5389 5093 3955 5712 3447 4936 2804 6405 * * * * * 2365 2347 * 6878 15 46 5579 6590 1585 585 531 1699 7347 1669 2121 A 16 4710 * 3344 5707 5873 3579 4880 6083 5310 * 5993 5000 3179 7211 6824 1794 2264 * * * 16 9 * 7278 * * * 0 7352 0 1607 X 17 2500 * 3020 2864 6347 4912 * 4988 4096 5012 6268 4674 3124 3921 5710 4885 3758 6253 5423 * 17 0 * * * * 640 1481 7342 0 1925 D 18 2548 * 2832 1509 * 5058 * * 5636 * * 4091 6354 3314 6161 3677 5410 * * * 18 37 5934 6811 1314 742 0 * 7358 1689 1000 R 19 3743 * 3235 2183 6404 6079 4192 * 3753 6278 * 4537 * 2083 4135 4696 4163 * * * 19 15 6618 * 1000 1000 * 0 7368 1000 1000 I 20 5455 7021 7247 4319 4587 6349 5847 1986 3217 2923 * * * 4906 3615 7282 4530 2536 * 6304 20 76 4289 * 1533 612 * 0 7368 2494 1000 X 21 2931 6435 3070 2597 * 4303 * 5718 3318 3337 6417 4171 * 3311 3861 5592 6181 4933 * * 21 0 * * * * 0 * 7355 0 1000 E 22 2330 * 3434 2129 * 5319 6247 6842 3680 5375 * 5585 7074 3504 3774 3523 4196 * * * 22 34 6391 6463 1411 681 * * 7373 1574 0 A 23 3955 * * * 2570 6250 4634 2425 5035 2447 3253 * * * 5535 * 6289 2892 5840 5496 23 62 * 4566 * * * 0 7358 0 1000 X 24 3785 4899 6348 4059 5778 5434 5812 2754 3823 2545 4160 * * 3844 3992 6580 4046 3429 * 5651 24 0 * * * * * 0 7287 0 2818 A 25 2243 * 2936 2144 * 5816 6067 5310 2921 * * 5030 * 3733 3826 4653 6006 6582 * * 25 0 * * * * * 0 7302 0 2818 I 26 1991 5437 3220 3473 6585 3060 6466 5047 4824 4260 5774 5291 6781 4169 4613 4744 4216 * * 5152 26 0 * * * * 0 * 7302 0 2818 L 27 3618 5133 * * 2713 3754 6295 3056 6320 1388 3959 * * * 6394 6784 * 5538 * 5100 27 0 * * * * * * 7373 0 0 D 28 3568 * 5308 2906 5584 4180 5464 5157 2742 3592 4610 3571 * 3745 3225 4156 * 5644 * 6051 28 15 6612 * 1000 1000 * * 7373 1000 0 G 29 1899 * 4267 3549 * 4998 6202 * 4441 * * 4791 * 4736 2677 3047 2838 * * 6295 29 26 5808 * 2000 415 * * 7373 1528 0 L 30 4943 * * * 4956 * * 4396 * 696 3113 * * 7005 * 6126 5146 3998 * 4574 30 123 4744 4488 1556 600 * * 7373 2507 0 A 31 3005 6531 6199 5888 * 5604 * 6882 1901 3410 5315 6796 2827 3586 3339 5462 * 4600 * 5499 31 89 * 4069 * * 275 2529 7350 0 3003 P 32 2630 * 3435 3302 6284 2557 5258 6308 4063 * * 3989 6317 5339 4272 3995 3394 6207 * 4644 32 88 * 4079 * * 0 * 7343 0 3467 E 33 3209 * 5062 2348 * 5662 4540 5793 3395 4107 * 3781 6364 3372 4222 4654 3633 3786 * 8067 33 36 6470 6221 2322 322 312 2363 7336 1000 3105 L 34 6810 3532 * * * * 4922 1393 5475 2872 5189 6592 * * * 5272 5417 2110 * 6256 34 90 4050 * 2592 262 0 * 7346 3093 1820 P 35 5108 * 3957 3610 * 6121 * * 5892 * * 6532 540 6359 6053 4453 5515 * * * 35 17 6415 * 3000 193 * * 7377 1000 0 G 36 4636 * 5892 2648 5744 1363 5016 6735 5384 5132 5855 5487 4844 4814 7375 4474 * 4302 * 3807 36 46 4984 * 426 1968 * * 7377 2267 0 L 37 4654 * * * 5861 6415 * 1816 * 2207 4433 * 6885 * 6353 4820 5797 1688 * * 37 0 * * * * * * 7377 0 0 T 38 5975 * 5554 6351 6891 6681 * 3735 2166 1922 * * * 6556 3119 5382 4125 2612 * * 38 14 * 6688 * * * * 7376 0 0 E 39 3366 * 3703 2383 4357 4141 4326 6112 4741 5434 * 4095 5531 5039 5818 2393 5055 6443 * 4508 39 12 6936 * 0 * 0 * 7372 1000 1000 F 40 4888 * * 6710 2162 6560 * 2912 * 2118 5013 * * * * 6530 * 2635 4315 3233 40 14 6710 * 1000 1000 * * 7381 1000 0 R 41 5055 * 4316 2462 6405 6208 3377 5568 4318 * 6942 4957 * 3918 2934 2669 3223 6267 * 5024 41 0 * * * * * * 7381 0 0 H 42 2794 4228 6295 * 3407 4489 4922 3856 6328 3834 5387 * * * * 4327 4994 2079 3885 4137 42 24 * 5906 * * * * 7380 0 0 G 43 5118 * * 6682 6561 351 4107 6615 * * 5324 * 6392 * 6434 5282 6109 6670 * * 43 69 4991 6032 1251 786 * 0 7380 2163 1559 P 44 3814 * 5725 4470 * 4710 5204 4137 3272 5209 6105 * 2579 5320 2273 5354 3302 4373 6598 6179 44 96 4474 5691 1726 519 1977 423 7379 2771 2437 N 45 4584 * 2514 6278 * 5280 5697 4687 5788 6156 6447 1601 3139 4366 6158 4572 4837 4053 * * 45 75 * 4301 * * 1370 706 7375 0 2962 R 46 3046 6099 4916 4271 3501 6597 * 3620 6429 2707 6686 3430 * 5189 4887 4809 4916 2412 * 6129 46 139 4472 4424 1807 485 842 1177 7271 2566 4162 D 47 4547 * 2909 6596 6312 3147 5561 5494 4466 4595 * 4941 4538 * 4899 1539 4285 4586 * 6373 47 192 6598 3126 2322 322 1215 813 7492 1000 3698 F 48 6535 * 5154 5371 3693 5451 6631 3729 5262 2968 6709 5245 2293 6482 4767 3359 2773 4726 * 5166 48 116 5605 4148 2349 315 1600 577 7272 1814 5011 E 49 4607 6193 2719 1958 5460 5419 6249 7047 5142 4895 6657 5084 4937 4846 6502 2764 4816 3227 * * 49 12 6867 * 0 * 588 1580 7250 1000 5051 Q 50 2985 * 2526 4805 6889 2691 6209 * 3412 6105 * 3671 4217 3343 3850 4427 5581 6446 * * 50 62 5572 5588 1000 1000 773 1270 7335 1610 2954 K 51 3371 5976 4947 6822 5251 5300 6495 6599 4528 3368 5713 3649 4363 4958 1667 4131 4605 5064 * 6579 51 166 3445 5870 1193 830 984 1016 7541 3719 2576 S 52 2627 5986 2550 3815 * 4089 4922 5945 6281 * * 3438 6228 3751 5571 2524 4644 4479 * * 52 69 5604 5240 1418 677 1979 422 7539 1657 2724 E 53 5114 6568 3725 3098 * 2734 4943 6562 2673 6669 6605 4357 5566 3376 3737 3302 5663 5338 * 6535 53 12 * 6858 * * 1002 998 7560 0 3502 R 54 4637 * 2545 4353 * 1471 6653 5492 4541 * * 3859 5577 * 5071 2903 4312 * * * 54 14 6736 * 0 * 1013 987 7577 1000 2543 Y 55 6329 * * * 1781 * 5051 5516 * 4638 4597 6371 * * * 5256 6533 3970 3886 1386 55 29 6515 6824 2322 322 0 * 7390 1000 1674 P 56 5320 6319 1440 4638 * 5784 4970 * 6570 4999 * 5013 6406 3993 6860 4536 1757 6848 * * 56 27 * 5734 * * * 0 7380 0 1000 Y 57 6332 * 6600 5773 3019 5682 1765 4412 * 4430 4305 6781 * 6882 6495 * * 2472 5607 2751 57 0 * * * * 1642 557 7370 0 2037 G 58 1545 4067 * * 6287 1881 * 3788 6701 * 4307 6622 * * * 3791 * 3344 * * 58 19 6292 * 0 * 0 * 7376 1000 1656 F 59 4902 * * 6018 2143 * 5197 3209 * 1327 * 6557 * * * * 6408 3233 5464 4671 59 0 * * * * * * 7385 0 0 L 60 5579 5273 6637 4301 5374 * 5099 2399 * 3376 6647 5798 * 6387 5412 4136 3506 2148 * 3068 60 0 * * * * * * 7385 0 0 C 61 2456 4892 * * 6529 4058 * 4803 * 3444 3168 * * * * 2340 3890 2256 * * 61 18 6324 * 1000 1000 * * 7385 1000 0 T 62 4725 6981 2568 3216 5674 6251 5504 5096 4676 4299 5555 * * 5811 2932 6213 2335 3298 * 5598 62 0 * * * * * * 7385 0 0 F 63 * * * * 429 * 4074 6251 * 3334 * * * * * * * 4140 * 5125 63 0 * * * * * * 7385 0 0 T 64 2675 * 2039 2391 * * 5264 * 3404 * 6360 6139 4411 4428 4020 4899 6410 4261 * 6656 64 0 * * * * * * 7385 0 0 D 65 5593 * 1442 * * 5075 6534 * 5225 * * 3585 * * 6035 1574 3347 * * 6464 65 0 * * * * * * 7385 0 0 K 66 3007 * 5910 2443 * 6353 6516 4568 2401 3509 5648 6784 4736 4468 4233 4773 7425 3702 4767 6409 66 0 * * * * * * 7390 0 0 A 67 1852 * 2978 1727 * 6420 * * 4201 * * 5662 6983 3353 * 4544 5053 5416 * 7341 67 0 * * * * * * 7381 0 0 A 68 1420 * 1642 5317 * 3954 4660 * * * * 5396 * 6295 * 4065 5386 5523 * 4845 68 0 * * * * * * 7381 0 0 L 69 5888 * * * 3949 * 3830 3742 * 1193 5015 * * 5034 2848 * * 4279 * 3574 69 0 * * * * * * 7381 0 0 D 70 3567 * 1968 2735 * 5303 * * 4300 7191 * 3656 6624 2670 3377 4124 6123 6356 * * 70 0 * * * * * * 7381 0 0 A 71 1754 * 4775 3274 6661 4770 6844 4275 5223 5452 6352 5248 * 5521 3761 4584 3281 4152 * 3790 71 0 * * * * * * 7381 0 0 Y 72 * 6027 * * 3460 * * * * * 5343 * * * * * * * 6278 224 72 0 * * * * * * 7381 0 0 A 73 2794 6663 3875 5255 6440 4860 * 4304 4571 2739 4670 4193 * 2477 5828 3912 5223 4189 6841 6037 73 30 5607 * 0 * * * 7381 1548 0 V 74 3449 * 3457 3299 * 6389 6187 5687 4286 4907 * 3207 4318 3863 6343 4749 2791 2600 * * 74 70 4391 * 1708 527 * * 7568 2678 0 H 75 4584 5403 2216 * * * 858 * * * * 3600 * * * 3549 * * * * 75 0 * * * * * * 7564 0 0 P 76 3533 * 5659 4455 * * 6127 * * * * * 315 6045 * 6071 * * * * 76 0 * * * * * * 7564 0 0 T 77 1892 * 3693 3043 4612 4474 5401 4022 5024 3593 * 6731 * 4847 5465 4621 4897 3746 * 4982 77 0 * * * * * * 7528 0 0 H 78 * * * * * * 203 * * 6074 * * * 5014 5176 * * * * 4112 78 41 * 5169 * * * * 7528 0 0 Q 79 5044 * 4107 3957 * 6664 5657 4160 3300 3058 4707 6091 * 2202 3815 * 5975 2452 * * 79 0 * * * * * 0 7441 0 2175 R 80 2222 * 4707 2061 * * * * 3121 * * 3893 * 3377 2534 4596 6055 * * * 80 20 * 6193 * * * 0 7433 0 2175 A 81 2710 6232 * * 1308 * * 3297 * 3585 5609 * * * * * 6232 2428 * 5311 81 264 * 2580 * * 412 2010 7062 0 2566 G 82 1534 * * * * 2598 4329 3619 3096 * 5396 6090 * * 5632 4257 5197 3276 * * 82 119 5954 3988 0 * 3055 185 6676 1000 4319 G 83 1855 * 4034 2653 * 3157 5009 * 3304 5554 * 3413 * 5581 5202 4161 4640 * * * 83 117 6066 3994 0 * * 0 6702 1000 4649 X 84 4239 * 4035 3739 3175 * 4620 3495 3287 2711 * 4862 5378 * 3399 * 3563 5459 * 4175 84 0 * * * * 2364 312 6524 0 4872 L 85 * * * * 2678 * 5304 2721 * 932 * * * * * * * 3175 * 4970 85 110 5224 4416 1000 1000 544 1671 6423 1000 4566 V 86 4794 * * 5564 4126 5191 * 1974 4247 3186 4254 * * 4965 4750 * * 1647 * * 86 101 * 3883 * * 959 1042 6636 0 3138 A 87 2291 * 3678 2822 * 5428 * * 2553 3541 * 5111 2907 * 4547 4425 5492 5461 * * 87 77 * 4260 * * 2530 274 6663 0 2996 S 88 2819 * 5474 5178 4383 * * 5588 4448 2962 5442 4498 4156 5028 4971 1894 5632 4087 * 4994 88 90 * 4042 * * 2706 240 6515 0 3307 C 89 3111 2728 * * 4996 * 4894 3621 5540 2295 5579 3828 * * 4253 4091 5234 3307 * 4978 89 0 * * * * 2107 381 6307 0 3451 R 90 4961 * * 1807 * 3478 * 4953 2003 5024 * 5604 * 4890 2675 5377 * 4473 * * 90 0 * * * * 586 1583 6258 0 3166 N 91 3756 * 2830 4317 * 2424 4477 * 4294 * * 4538 2188 * 4918 3239 5249 * * 5313 91 34 * 5423 * * * 0 6347 0 1632 G 92 3816 * * * * 2056 * 3714 4041 3324 * 3222 4840 4769 5624 4066 5336 2877 * 4958 92 44 * 5050 * * 614 1529 6313 0 2024 A 93 2602 4420 * 5115 * * 5016 3011 * 3115 * * * * 3504 * 3359 2718 3054 4992 93 82 * 4183 * * * 0 6126 0 1598 D 94 2925 * 1417 2130 * * * * 5115 * * 3582 * 3172 * 4575 * * * * 94 82 * 4177 * * 1005 995 6031 0 2603 G 95 * * 1889 4130 * 2019 * * 2526 * * 5317 4999 * 4287 3104 * * * 5129 95 0 * * * * * 0 6022 0 2497 I 96 5295 * * * * * * 1954 * 2645 * * 5339 * 5026 4113 5243 1262 * * 96 32 * 5511 * * 1873 460 6022 0 2497 L 97 * * * * 5219 * * 2699 * 1408 3684 * * 4296 3535 5355 4825 2576 * * 97 0 * * * * 814 1214 6105 0 2067 V 98 2368 4186 * * * * * 3704 * * 3892 * * * * 5194 * 786 * * 98 0 * * * * 1000 1000 6066 0 1144 V 99 4023 * * * 2053 * * 4330 * 2674 * * * * * * * 1701 * 2446 99 0 * * * * 0 * 6068 0 1000 D 100 * * 93 * * * * * * * * 5017 * * * * * * * 4995 100 0 * * * * * * 6063 0 0 L 101 * * * * 1180 * * 2817 * 3019 * * * * * * * * 4665 1977 101 0 * * * * * * 5683 0 0 E 102 * * 2843 635 * * * * 3788 * * 4840 * 3803 * * * 4722 * * 102 0 * * * * * * 5629 0 0 V 103 * * * * * * * 2696 * 2453 4389 * * * * * 3909 866 * * 103 0 * * 0 * * * 4956 0 0 //