HHsearch 1.5 NAME c2yupA_ FAM FILE c2yupA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2yupA_.a3m DATE Fri Mar 12 05:18:12 2010 LENG 90 match states, 90 columns in multiple alignment FILT 110 out of 3639 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.9 EVD 0.4406 -0.0215 SEQ >ss_dssp CCSSCCCSCSCCCGGGSEEEEECSCCCCCSSSBCCCCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEECCCCCCCCCSSCCCC >sa_dssp EEEEEEEEEEEEEDECDBDACADEEBEBEEEECABAEEDDDACACECEDEEDBCADAEEEDDDBCACBEDBEDDDEBEEEEEEEEEEEEE >ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCEEEECCCCCEEEEECCEEEECCCCCCCCCCCCCCCCC >ss_conf 988889887875668842799960317898876567179889998953789637998389949999724389916854335677897999 >Consensus xSxxxxxxpxxxxxxxxxxxxalydfxxxxxxeLsxxxGdxixvixxxxxxwwxxxxxxxgxxGxvPxxyvxxxxxxxxxxxxxxxpxsg >c2yupA_ GSSGSSGKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRLRLCDDSGPSSG >UniRef50_UPI0000D8703F(2-90:893) hypothetical protein CIMG_04531 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D8703F E=1e-08 s/c=0.69 id=20% cov=94% ----SQSAQPPRGVQPGDILLVVHNFDSRGADELTLRRGDKVELLELDDgfgDGWFLGRHVTNNETGLFPGVYTTTAPNIGVKTQSKPAPP-- >UniRef50_A1Z9K8(529-603:1871) LD13733p n=12 Tax=Diptera RepID=A1Z9K8_DROME E=4e-06 s/c=0.70 id=21% cov=84% ---------------PSTTVVCMEPYAGNTVGHIRLQPGDVIEVVGSTDCGLLEGYVRGTNQSGFFPADCVQEVSLRQKHITNVMTASTG >UniRef50_A9JR87(38-90:264) Zgc:171590 protein n=4 Tax=Clupeocephala RepID=A9JR87_DANRE E=0.0001 s/c=0.90 id=19% cov=60% --------------------VSLYDYPSRGPGDCAIRVGERLNILS-DEGEWFKVSSSATGNESYIPSNYTAKL---------------- >UniRef50_D1MYR7(25-112:573) Polarity protein BemA n=2 Tax=Sordariomycetes RepID=D1MYR7_9HYPO E=6e-10 s/c=0.74 id=21% cov=93% -------KSAVAIIPPKKVIRALYDYEAQSSQELSFSKGDFFHVIGRENDEDWYEACNPAlpDARGLVPVSFFQALgrTERDSAQSDGGRPPTA >UniRef50_A7T1V2(154-224:282) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7T1V2_NEMVE E=7e-07 s/c=0.78 id=18% cov=80% -------------KKNFGEYVALWDFNATAEDDITASKGDVVTVLNKDDPD-WYWVVKRSGDEGFIPKEFIIPADQLSVKFHDET----- >UniRef50_B0V162(1013-1098:1665) Novel protein similar to vertebrate intersectin 2 (ITSN2) n=6 Tax=Clupeocephala RepID=B0V162_DANRE E=7e-06 s/c=0.60 id=17% cov=93% --PDTASSAVPSKKPEIAQVTTVSP--ATTPEQLSLTPGQLIVVLHKNSNSWWLGELQARGkkrKKGWFQSSNVRLLEANSGKITPAPQP--- >UniRef50_C0NFZ4(64-140:1165) Cytoskeleton assembly control protein SLA1p n=11 Tax=Leotiomyceta RepID=C0NFZ4_AJECG E=2e-05 s/c=0.65 id=19% cov=81% ---------------PISKAKALYDYTRQTDEEVSFAEQVELVVYDTSDPDWTLVGVNND--FGFAPANYIEITEEFLAKEAASAPPHS- >UniRef50_UPI00005A2D73(104-191:681) PREDICTED: similar to CD2-associated protein n=5 Tax=Canis lupus familiaris RepID=UPI00005A2D73 E=0.0001 s/c=0.54 id=22% cov=97% -SRPSAGRPAKPRGPQ-RWCKVSFSYSPEQADELQLQAGEIVEVIKEI--EDGWWLGKKNGQLGAFPSNFVELLDsgPPSLGSPDMPAVSPG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 3035 0 0 S 2 2509 * * * * * * * * * * 4456 4607 * * 439 * * * * 2 0 * * * * * * 5925 0 0 S 3 4153 * * * 4735 5021 * * * * 5404 * 1355 * 5153 1786 2809 * * * 3 0 * * * * * * 6508 0 0 G 4 3274 * 5064 * * 1504 4826 * * 4175 * 5048 3596 6072 4953 2918 3876 5064 * 4906 4 0 * * * * * * 6556 0 0 S 5 2370 * 5705 3787 * 4661 * * * 3249 * 4458 4528 * 5484 1842 2842 4619 * * 5 0 * * * * * * 6910 0 0 S 6 3528 * 4118 4494 * * 5906 * 5856 4605 5678 * 2030 3490 4701 2237 3644 4944 * 5664 6 0 * * * * * * 7035 0 0 G 7 2437 * 5478 6124 5720 2894 5014 * 5821 5887 5742 5808 3008 5754 5037 1851 4575 5032 * * 7 0 * * * * * * 7110 0 0 K 8 4458 * 5342 3763 * 5715 * 5006 3092 4120 * 5934 3687 2689 2743 2845 4390 6438 * 4861 8 0 * * * * * * 7103 0 0 P 9 3302 * 6344 6438 * 6289 * 6180 4537 5108 5029 * 1073 5428 6170 2288 5150 * * * 9 18 * 6316 * * * * 7134 0 0 P 10 3250 * 4457 4525 * 4817 6382 3574 3900 6274 * * 1576 6451 4967 3190 4073 4422 * * 10 34 5409 * 0 * * 0 7146 1637 1000 T 11 5746 * 5339 4719 6479 6307 * 4492 4668 4200 5122 * 1776 4577 4512 2940 2674 3985 * * 11 22 6058 * 3322 152 * 0 7138 1000 1000 Y 12 3763 * 5128 4981 6354 4804 5688 4250 5802 5287 5394 3002 2644 5145 4888 2803 3980 4024 * 3970 12 0 * * * * 0 * 7201 0 1000 Q 13 4166 * 4380 2531 * 5446 * 3715 3518 * 6351 5177 4710 2821 4413 2596 4643 3946 * * 13 17 6441 * 1000 1000 * * 7231 1000 0 V 14 4007 * * 4329 6790 3944 6321 3950 2769 3630 5421 3610 3833 5121 5558 3123 4688 3078 6389 * 14 0 * * * * * * 7229 0 0 L 15 3335 6376 5337 4719 * 4122 6876 5970 5564 3659 5264 * 1878 3976 6115 2856 4257 4350 6436 5895 15 0 * * * * * * 7227 0 0 E 16 5628 * 4724 2462 4804 4624 6767 6418 3690 5677 * 4620 1848 4698 5907 3319 3633 6405 * * 16 98 4505 5514 1916 444 * * 7211 2868 0 Y 17 4354 4434 6648 5392 3572 3133 * 3345 4583 3216 5629 5213 3920 5210 5399 2980 4525 4719 * 4235 17 0 * * * * 0 * 7192 0 1764 G 18 3137 5715 4561 4822 4880 2171 4670 6189 4457 6629 * 5447 3390 4980 4998 4060 4122 3779 * 4227 18 89 4304 6798 1251 786 * * 7200 2971 0 E 19 5127 * * 3602 4485 * 4995 4356 3113 4291 6543 * * 2656 2924 5709 3548 4362 6717 2903 19 39 5671 7082 1962 428 * 0 7024 1630 1000 A 20 1406 3801 7158 * 4148 4035 * 5411 * 4709 6059 6750 * * 6708 * 6509 2128 * 3457 20 39 5221 * 2504 280 982 1018 7069 2268 1601 V 21 * * * 4273 5963 * * 2414 3171 3744 * 6681 * 3953 2229 * 4341 2421 * 4825 21 30 5594 * 2109 381 0 * 7069 1688 1000 A 22 762 6411 * * * 5288 * 6878 5680 * 6822 * * * * 4564 5105 1973 * 6610 22 35 * 5369 * * * * 7058 0 0 Q 23 4184 * * 5375 * * 5547 2861 3647 1270 4668 6243 * 5691 4540 4334 6585 3436 * * 23 0 * * * * * 0 7042 0 1755 Y 24 4982 5256 * 6401 2458 * 3320 6429 5842 5539 6038 6588 * * * 4861 4993 6401 5740 1072 24 18 6338 * 2000 415 0 * 7065 1000 1755 T 25 3438 * 1326 3766 * 6433 5916 * 6031 * * 2979 3189 * 6454 3299 5160 * * 6108 25 58 5110 6538 1225 806 * * 7089 1800 0 F 26 6635 6488 * * 919 * 5074 * * 5103 * * * * * * * * 5223 1457 26 0 * * * * * 0 7086 0 1000 K 27 3713 6133 3199 3034 6057 * * 7183 2990 5014 5900 4798 5184 3400 4723 3452 3573 3321 6437 * 27 0 * * * * 0 * 7086 0 1000 G 28 1484 * * * * 2730 * * 5355 * * 5766 2203 6055 4559 2922 5733 6732 * 6131 28 21 6125 * 1892 453 * * 7089 1616 0 D 29 4726 * 3444 4089 * 4720 5189 * 3848 5947 4763 4196 5678 2670 3578 2703 2943 5308 * * 29 57 4700 * 821 1204 * * 7089 1811 0 L 30 4333 * 2829 2931 * 2882 5748 4564 4657 6943 5083 3187 5514 4404 5567 3570 3713 5055 6131 * 30 20 6193 * 2375 309 * * 7089 1615 0 E 31 3373 * 2848 2356 * 4953 5683 6668 3639 * * 4539 2252 4592 * 3446 5076 6433 * * 31 20 6203 * 2322 322 * * 7089 1000 0 V 32 5018 * 1508 4174 5777 2873 4336 * 5484 * * 2697 5755 4298 6419 4285 5023 5788 * * 32 21 6131 * 1000 1000 * * 7089 1000 0 E 33 5707 5662 2985 857 * 5065 4195 * 5687 5777 * 6871 5709 3730 * 5165 5069 * * * 33 42 5712 6669 2425 297 * * 7089 1591 0 L 34 6357 6522 * * * * * 2942 * 471 4021 * * * * * * 3976 * * 34 0 * * * * 0 * 7032 0 1000 S 35 3823 * 4378 3843 * 4605 6757 * 4613 * * 4513 4177 5054 4146 1399 2686 * * * 35 0 * * * * * * 7100 0 0 F 36 5352 6290 * * 1576 * * 3749 * 1450 4268 * * * * * * 2887 * * 36 0 * * * * * * 7100 0 0 R 37 * 6098 6833 3510 5130 * 4738 6903 2233 4115 5844 4417 6757 3034 2766 3790 3317 5114 * * 37 12 6947 * 4087 87 * * 7100 1000 0 K 38 2773 * * 2059 * 6558 * 4906 1972 * * * 3543 4794 3724 6427 6668 3382 * * 38 18 6337 * 0 * * * 7100 1000 0 G 39 6141 * 3196 * * 297 * * * * * 3996 * * * * * * * * 39 43 6115 6053 1585 585 * * 7100 1000 0 E 40 5914 * 829 2093 * * * 6810 * 6573 6178 6380 * 3078 * * * 6686 * 6289 40 0 * * * * 0 * 7011 0 1000 H 41 4672 * 6853 4907 4907 6707 6948 2329 3241 3833 6537 7299 5199 4165 4375 4684 4380 2219 7315 4769 41 0 * * * * * * 7100 0 0 I 42 5700 6537 * * 4097 * * 1507 6053 2099 5176 * * * * * * 1870 * 6613 42 0 * * * * * * 7100 0 0 C 43 5024 5838 4500 2380 6032 * 5731 4234 4534 3610 7132 5591 * 4007 4336 4742 2995 3704 6948 3109 43 17 6432 * 2000 415 * * 7100 1000 0 L 44 5857 * * 6017 5159 * * 1787 * 2348 6947 6606 * 6565 6053 6432 * 1376 * 6337 44 17 * 6427 * * * * 7100 0 0 I 45 * 6616 6785 5754 5962 * 6826 1673 * 1579 6012 * * 4862 * 4636 3882 3350 * 4919 45 90 4691 5530 770 1274 * 0 7022 2793 1000 R 46 5183 * 2769 1920 * 3656 4782 * 3600 6412 * 4012 * 4865 3189 3369 6562 * * 4708 46 37 * 5311 * * 552 1654 7005 0 2302 K 47 5146 * 3389 4158 * 5656 5913 5589 1736 5382 4209 5531 5005 3866 3062 4055 5028 4914 5668 * 47 58 6557 5110 3700 115 1047 955 7018 1000 2532 V 48 3777 5815 3005 3547 * 4514 4806 4805 5388 5117 5869 4549 3670 4374 5996 3016 3945 3087 6353 6581 48 106 5143 4565 418 1990 531 1700 7045 2272 2908 N 49 5907 6054 2068 3146 * 3159 6689 * 4589 6478 6879 2615 3686 4953 6293 3861 5684 4931 * 5215 49 55 4748 * 1175 844 756 1294 7023 2640 3447 E 50 3906 4900 2440 3287 * 3040 6417 * 3630 5606 6471 3285 4093 3990 6121 3575 * 4994 * 6213 50 50 5830 5898 1595 580 594 1568 7037 1652 2227 N 51 6082 * 1988 3332 * 1768 4966 6376 6292 5414 5718 4297 6166 5944 6626 3849 6556 * 4932 4754 51 68 5641 5267 0 * 0 * 7042 1751 2267 W 52 6357 * 3913 4880 5244 4140 6914 * * 5762 5741 5067 4730 6578 * 5263 5022 * 732 5492 52 10 7172 * 2322 322 562 1632 7024 1000 2185 Y 53 5621 5640 5121 6129 4566 3809 * 5164 * 3746 4408 6400 * 6022 * 6082 5543 5897 1013 3682 53 40 6359 6018 0 * 0 * 7042 1000 1000 E 54 * * 6899 3011 4076 5012 6651 6516 3964 3123 4778 7222 * 4543 5733 * 4225 3907 2083 3100 54 15 * 6560 * * * 0 7013 0 1760 G 55 2694 4767 * 5669 6061 1672 * 6542 4128 5972 5257 6428 * 4157 5819 6878 * 2701 3644 5475 55 47 6034 5881 2108 381 571 1613 7004 1737 2297 R 56 4119 6075 * 2616 6155 4797 5446 4583 2585 3873 6373 * * 4560 2874 5645 4234 3485 * 4021 56 81 5723 4804 0 * 596 1564 7008 1697 2219 I 57 * 4385 5330 5123 * 3653 5781 2973 4257 3081 * 3158 6506 * 2865 4772 4866 2637 * 6492 57 114 * 3715 * * 282 2491 7011 0 2993 T 58 5180 5124 3879 3591 * 5588 5163 3727 4663 3648 5676 2413 3667 3667 3980 4323 4767 6660 6178 6523 58 77 * 4266 * * 3119 176 7045 0 3753 G 59 3529 4817 3508 4253 4916 3046 6216 4716 3759 4932 * 3899 6645 6875 2805 3415 5073 4079 * 6171 59 82 6678 4456 0 * 575 1604 7035 1000 4349 T 60 4663 * 3451 3271 6276 2900 * * 4692 * * 3059 6404 5033 3272 3831 2036 * * * 60 54 5166 6789 906 1100 258 2611 6986 2273 3401 G 61 5417 * 3894 4433 4650 1026 6612 6390 4415 5065 * 4008 6387 4460 4992 4559 6510 5800 * 6516 61 88 4233 7363 1669 545 755 1295 7005 3318 1815 R 62 4497 4641 5899 2647 * 6551 7167 * 2482 4965 6576 6036 5471 2205 2850 4795 4341 6521 * 6573 62 14 6682 * 1000 1000 1000 1000 7031 1000 1695 Q 63 5370 * * 2146 4920 7081 6916 4567 3769 6040 6599 5659 6553 4700 2969 2973 3479 2987 6607 6632 63 30 6423 6831 1000 1000 0 * 7028 1000 1000 G 64 6169 * * * 6117 62 * * * * * * * * 6195 * * * * * 64 20 6195 * 3322 152 0 * 7083 1000 1000 I 65 5844 * * * 3122 * * 3019 6627 2051 5777 * * * 6427 5680 6459 4415 2225 2545 65 0 * * * * * * 7021 0 0 F 66 4299 4498 * * 1464 * * 2773 * 4963 * * * * * * * 1499 * 6589 66 0 * * * * * * 7039 0 0 P 67 6105 * * * * 6252 * * 4996 * * * 105 6472 * * * * * * 67 0 * * * * * * 7039 0 0 A 68 1894 * 7180 4490 4996 5437 5692 4396 3550 4769 5754 6700 * 5948 3487 2312 4457 4351 * 7221 68 0 * * * * * * 7039 0 0 S 69 3561 5451 4484 4348 6438 5815 * 5578 5717 6561 * 1713 * 4676 5326 2105 3809 5008 6078 * 69 0 * * * * * * 7039 0 0 Y 70 * 4481 * * 2111 * 4284 * * 5701 6364 5372 * * * * * 5129 6800 788 70 35 5372 * 1072 932 * * 7039 1750 0 V 71 6594 * * * 4531 * * 2556 * 1988 * * * * * 6757 3588 1211 * * 71 33 7301 5967 1000 1000 * * 7039 1000 0 Q 72 4737 * 3531 1459 * 6490 5056 5036 4085 6301 6123 * * 2603 3063 4990 4681 * * * 72 48 6685 5462 0 * 936 1067 7014 1000 1707 V 73 4782 * * 3397 4740 * * 2974 3218 2480 4928 6360 2969 * 4270 6577 6469 2547 * * 73 12 6861 * 1585 585 550 1657 6941 1000 2352 S 74 3982 6470 * 6345 4961 6403 6265 2136 5993 1901 5235 6566 6251 * 4764 4560 4490 3181 * 4032 74 114 4435 5058 1531 613 * 0 6958 2486 1000 R 75 4041 * 3544 3567 6247 5500 5962 6426 2767 5481 * 4876 3209 5638 3645 2533 3699 4475 * * 75 66 5751 5240 1000 1000 585 1585 6909 1647 2287 E 76 3431 5626 2644 2278 6390 3865 * 5701 3826 4674 5250 3772 5315 4088 5042 4253 4466 * * * 76 13 * 6759 * * 1517 620 6921 0 2208 P 77 3812 * 4794 2686 5679 4636 * 5425 4824 5490 * 4473 1579 4357 3755 4541 6216 5870 5597 * 77 37 5307 * 0 * 1478 642 6905 1691 2175 R 78 5871 * 3319 2178 6294 5172 6106 6584 3883 4439 5425 4359 4914 3913 2722 3208 4725 * 6225 * 78 19 * 6223 * * 929 1075 6970 0 1647 L 79 5810 5920 * 5597 3437 4343 5720 4572 3940 3417 * 4925 5190 6196 4721 3200 2256 3342 * 4185 79 20 6202 * 0 * 1093 913 6924 1000 1709 R 80 3844 * 4281 4225 * 3659 4254 * 1947 6376 * * 3497 3790 3627 3354 4782 * 4427 * 80 0 * * * * * 0 6893 0 1000 L 81 4291 * 4056 4872 3608 4813 4515 4253 6045 2916 * 3808 4097 4239 * 2797 3512 4226 5293 * 81 0 * * * * 0 * 7011 0 1000 C 82 3386 4347 * 4644 5586 5770 4674 5487 4181 5183 * 5856 4262 3990 4837 1648 3092 5144 * * 82 0 * * * * * * 7022 0 0 D 83 * * 1675 4734 * * 3759 * 4588 5710 5561 3309 3276 3991 * 2666 4670 5082 * * 83 0 * * * * * * 6960 0 0 D 84 2667 5134 2886 4104 5499 3496 * 4655 3725 6055 4278 4744 5235 5699 3778 4006 4651 4426 * 5413 84 37 5308 * 1000 1000 * * 6920 1000 0 S 85 2293 * 5727 4973 * 3972 * * 4588 * 5083 4080 2496 * 4608 2118 4680 5619 * 4530 85 0 * * * * * * 6816 0 0 G 86 2189 * * * * 2887 * 5675 3880 4023 * * 4388 3577 3155 2947 3305 5518 * * 86 0 * * * * * * 6714 0 0 P 87 2674 * * 5630 * * * * * 4265 5619 * 753 5071 * 4676 3903 5533 * * 87 0 * * * * * * 6659 0 0 S 88 4072 * 5161 * 5247 4755 * * * 4592 * * 1233 * * 1911 3103 * * * 88 0 * * * * * * 6311 0 0 S 89 3592 * 2920 * * 3408 * * * * * 4629 4616 * * 1047 2993 * * * 89 0 * * * * * * 5830 0 0 G 90 2294 * * * * 329 * * * * * * * * * * * * * * 90 0 * * 0 * * * 4943 0 0 //