HHsearch 1.5 NAME c2yttA_ FAM FILE c2yttA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2yttA_.a3m DATE Thu Mar 11 01:14:52 2010 LENG 46 match states, 46 columns in multiple alignment FILT 124 out of 12500 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.0 EVD 0.5228 2.5493 SEQ >ss_dssp CCCSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC >sa_dssp EEEEEEDEEEDEDDBEEECEDCEDDEECEECDEDCEEEEEEEEEEE >ss_pred CCCCCCCCCCCCEECCCCCCEECCHHHCEEEEEHHCCCCCCCCCCC >ss_conf 9576788788968835275842154441010341078713021787 >Consensus gxxxxshtgekpxxCxxCgkxFxxxsxlxxHxxxHtxekpyxCxqg >c2yttA_ GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG >UniRef50_B3MWG0(289-330:460) GF22455 n=1 Tax=Drosophila ananassae RepID=B3MWG0_DROAN E=4e-05 s/c=1.17 id=26% cov=93% -GHATLHDPNNPNTCPTCGKVYRQASSLRTHLLTHSGIKPFEC--- >UniRef50_A9JRB0(221-265:428) Si:dkey-253d23.9 protein n=5 Tax=Danio rerio RepID=A9JRB0_DANRE E=3e-09 s/c=1.40 id=30% cov=100% GIHSTIHTGEKPFTCDHCEASFARKDSLANHMKLHTGENMHKCDQ- >UniRef50_Q5TTA9(292-334:469) AGAP004259-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q5TTA9_ANOGA E=3e-05 s/c=1.15 id=30% cov=96% GHTNSAHTRDRKYVCDVCQKGFYTSSTMLSHRQIH-GEKKYQCS-- >UniRef50_UPI000186F007(185-223:1336) zinc finger protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F007 E=7e-05 s/c=1.24 id=22% cov=87% -ANGTPNS---PYRCNICTYNSLDKATLVRHMRSHNGDRPYEC--- >UniRef50_UPI00006A1D19(39-80:474) Zinc finger protein 236. n=4 Tax=Euteleostomi RepID=UPI00006A1D19 E=0.0004 s/c=1.09 id=30% cov=93% -GSVREESGIRWHICTYCNKEFKKPSDLVRHIRIHTHEKPFKC--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 2295 * * * * 329 * * * * * * * * * * * * * * 1 0 * * * * * * 4597 0 0 S 2 3143 * * * * 1714 5147 5110 5314 * * * 4102 5264 4904 1884 4029 4325 * * 2 0 * * * * * * 5141 0 0 S 3 5487 * 5366 * * 5283 1343 * 4296 * * 2976 4418 4520 4617 2471 4504 * * * 3 0 * * * * * * 5193 0 0 G 4 2515 * * 5206 * 2133 * 5968 2865 3822 5962 4618 4413 * 3826 3860 * 3280 * * 4 0 * * * * * * 5319 0 0 S 5 3025 * * 5912 * * * 6011 3635 5749 5879 4691 4270 6109 3349 1835 2115 6104 * * 5 0 * * * * * * 5513 0 0 S 6 4546 5987 6207 * 5751 * * 6043 4240 5117 4849 * 3709 4885 5992 1121 2549 5572 * * 6 0 * * * * * * 5612 0 0 G 7 5651 4849 5310 4831 * 4102 848 * 6183 * * 4051 4274 4799 4769 4511 5992 6207 * * 7 0 * * * * * * 5612 0 0 E 8 5249 * 5120 3088 * 5372 * * 6013 * * 5202 6573 6108 6215 2084 1040 * * * 8 11 * 7045 * * * * 6096 0 0 G 9 4082 6516 3597 5262 * 982 6761 * 3748 * 5400 4143 5767 4186 4874 5501 5530 * * * 9 9 7321 * 1585 585 * 0 6149 1000 1000 E 10 4608 * 3555 1054 6026 5760 * 4661 3686 4829 * 5554 5768 5268 4908 5587 5067 4144 * * 10 0 * * * * * 0 6142 0 1000 K 11 6635 * * 4465 6742 7453 * 6813 975 7019 6506 4600 7338 5778 1969 5221 4825 * * 6643 11 0 * * * * 0 * 6211 0 1000 P 12 4473 * 6828 5539 * * 5289 5531 4397 4351 * 4340 921 5339 4160 3737 4830 6284 * * 12 9 7356 * 0 * * * 6212 1000 0 Y 13 * 6383 * * 1681 * 2672 * * 5606 * 6796 * * 4810 5380 * * 5197 1312 13 9 7350 * 3000 193 * * 6212 1000 0 Q 14 4589 6458 5940 2965 * 4711 6313 5636 2060 6087 5856 6621 4594 3030 3550 4924 4043 3224 * * 14 0 * * * * * * 6212 0 0 C 15 * 184 * * 5481 5379 6635 * * * * * * * 6581 6789 * * 6203 5040 15 18 6306 * 1000 1000 * * 6212 1573 0 S 16 6639 * 2940 3013 * 4388 5063 6844 3197 6997 * 3082 3110 4374 5308 2705 4125 6101 * * 16 0 * * * * * * 6212 0 0 E 17 * 6348 4386 2224 4707 5637 3321 3350 4531 4198 5724 * * 3024 * 7254 4496 3006 * 4200 17 32 5527 * 1000 1000 * * 6212 1842 0 C 18 * 134 * * * * 5380 * * * * * * * 6291 * * * 6055 4753 18 0 * * * * * * 6212 0 0 G 19 4685 * 3645 4003 * 1103 6048 * 4825 4849 * 4064 3685 6020 5394 4403 4995 6291 * * 19 0 * * * * * * 6212 0 0 K 20 4630 * 6788 4501 6213 6160 * 6768 742 5421 5245 * * 5402 2966 * * 6258 * 4120 20 0 * * * * * * 6212 0 0 S 21 2337 5758 6253 6055 * 4623 * 6644 4196 5723 6650 5737 6203 4677 3369 2429 2362 3931 7073 * 21 0 * * * * * * 6212 0 0 F 22 * 5465 * * 401 * * 6734 * 4582 6348 * * * * 6261 4521 6406 * 3499 22 0 * * * * * * 6212 0 0 S 23 3724 5453 7074 6769 * * 5278 5165 3233 4132 4932 4172 5129 4810 3169 2341 2924 4476 * 5055 23 0 * * * * * * 6212 0 0 G 24 5482 5648 3455 6177 6131 5795 4177 6866 4646 4686 5541 5390 * 2688 2539 3129 3346 6291 5180 4261 24 0 * * * * * * 6212 0 0 S 25 4018 * 7015 3896 5888 * 4975 5684 2680 4036 4611 5217 4283 3531 2983 2613 5025 5782 6099 5708 25 0 * * * * * * 6212 0 0 Y 26 3715 5415 4613 5789 6951 4380 4398 * 4076 * * 4096 * 6174 5383 1455 3408 5525 7101 3408 26 0 * * * * * * 6212 0 0 R 27 4217 6802 3388 5160 6383 6138 2668 5899 4900 4256 5792 2903 7088 4910 5320 2706 4043 4300 * 4452 27 0 * * * * * * 6212 0 0 L 28 * * * * 3527 * 6171 5156 6723 750 3693 * 6026 6078 4743 * * 4401 5809 4130 28 0 * * * * * * 6212 0 0 T 29 5204 * 4599 5316 6026 * 5646 3710 2486 4595 6866 3634 * 3709 3020 4159 3079 3756 5993 5505 29 0 * * * * * * 6212 0 0 Q 30 3747 * 6514 4012 6966 5997 * 4124 3074 4603 * 5125 * 2886 2067 3535 4138 4270 * 6137 30 0 * * * * * * 6212 0 0 H 31 * 5380 * * * * 69 * * * * * * * * * * * * 5481 31 0 * * * * * * 6212 0 0 W 32 6259 6878 * 3729 4867 7090 * 3496 3138 3304 2481 6851 * 2691 3625 5654 5822 3801 5795 7153 32 11 7101 * 0 * * * 6212 1000 0 I 33 * * 6937 5050 5644 6662 6202 4088 2380 3617 4186 5140 6827 4960 1497 4928 5625 4206 * * 33 68 4434 * 1300 752 * * 6212 2728 0 T 34 6382 * * 6242 5896 5515 6612 2208 5258 3887 5521 5626 6201 * 3564 3315 1996 3126 6671 * 34 34 5405 * 0 * * * 6215 2470 0 H 35 * 6023 6405 * * * 192 * * 5480 * 6170 * 6254 6848 * * * * 4672 35 43 5991 6208 1301 751 * * 6217 1567 0 T 36 3042 * 5930 5476 5609 5398 6246 6910 6517 5013 5262 4291 * 5866 3691 2548 1445 5506 * * 36 11 7052 * 1000 1000 0 * 6208 1000 1521 R 37 4544 * 3887 3677 * 1324 7063 * 3904 5712 * 3980 5536 5746 3286 4428 4852 4995 * * 37 9 7327 * 0 * * * 6217 1000 0 E 38 4389 * 3133 1248 * 4175 4846 5184 3925 4934 6349 4653 5948 5279 6102 5611 5415 4362 * * 38 0 * * * * * * 6217 0 0 K 39 * 6343 5712 5511 5847 5585 7060 * 939 5446 * 5755 * 6074 2015 6048 4666 * * 5569 39 10 7109 * 0 * * * 6217 1000 0 P 40 5090 6599 5013 6985 * 7278 5532 5709 4902 5223 5730 5210 764 5062 4759 3646 6157 6781 * 6707 40 11 7028 * 1585 585 * * 6193 1000 0 S 41 6347 * * * 1616 * 2671 * * * * * * * * 4445 * * * 1125 41 0 * * * * * * 6193 0 0 G 42 3600 * 6686 2977 6587 4237 5542 4394 2129 5664 5548 5857 5195 3014 3886 5119 5462 3454 * * 42 0 * * * * * * 6192 0 0 P 43 5703 55 * * * * * * * * * * 5782 * * * * * * * 43 0 * * * * * * 6192 0 0 S 44 5577 * 3470 3803 6000 5724 6689 * 6466 * * 1825 5294 4830 * 1783 2964 * * * 44 0 * * * * * * 5993 0 0 S 45 4994 4582 * 1336 5371 * * * 4134 * * * * 1374 * 3971 * * * * 45 0 * * * * * * 5425 0 0 G 46 * * * * * 0 * * * * * * * * * * * * * * 46 0 * * 0 * * * 3077 0 0 //