HHsearch 1.5 NAME c2vxaL_ FAM FILE c2vxaL_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2vxaL_.a3m DATE Thu Mar 11 11:37:32 2010 LENG 66 match states, 66 columns in multiple alignment FILT 38 out of 42 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.3836 -1.1568 SEQ >ss_dssp CCEEEEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEC >sa_dssp EEEDDECEDEBDBEEBDEDABEDBCDEADEDCEDCEDDEDDDDEDDEEEEEDCDDCABADBABBDE >ss_pred CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEEEEEEEEEEEEEC >ss_conf 907999999971874678899999999875540834899999999984790889999999999969 >Consensus xxvxKviEivgxSxxSxedAvxxAvxxAxkTlxxixxxeVxexxxxvxxgxixxyrVxlkvxFxle >c2vxaL_ DHVYKIVELTGSSPNGIEEAVNNAIARAGETLRHLRWFEVVDTRGHIEGGRVNHWQVTVKVGFTLE >UniRef50_B8IBC4(3-66:71) Putative uncharacterized protein n=3 Tax=Methylobacterium RepID=B8IBC4_METNO E=1e-13 s/c=1.21 id=34% cov=98% --VVKFIELSAQSPQSYEDAIKQAVETASNTLRNIQSVWVKEFEAVVENDKVTQYRVNVKLSFLLE >UniRef50_D2RT73(7-67:69) Putative uncharacterized protein n=2 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RT73_9EURY E=0.0004 s/c=0.75 id=35% cov=94% -----IVELVGNSTESWEDAVQNAMDAADETIDHVSGVEIESERIDREGRETERYVVTLEASIVPE >UniRef50_A4CG68(3-66:66) Putative uncharacterized protein n=7 Tax=Flavobacteria RepID=A4CG68_9FLAO E=6e-12 s/c=1.12 id=23% cov=98% --VLKVIEVLANSDKSWEDAAEKALAQASKSVDHIRSIYINEQSCTVKDGKIASYRVNTKITFEVK >UniRef50_D2S5H8(12-76:77) Putative uncharacterized protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5H8_9ACTO E=4e-11 s/c=1.06 id=37% cov=98% --VVRISEIVGSSPNSFSDAVRNAVQAAAQTVRGIRGVEVIGSNADVdENGNLSLYKVHCKIAFVVE >UniRef50_C7R5Z8(3-66:67) Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=C7R5Z8_KANKD E=1e-10 s/c=1.05 id=32% cov=98% --VAKVTEIIADSSESFEDAVKRGIRRANKTLDQVKSAWVKEQQVVIQDGEVEKFRVVMKVTFLLK >UniRef50_Q89JD1(181-245:247) Bll5352 protein n=14 Tax=Bacteria RepID=Q89JD1_BRAJA E=2e-10 s/c=1.03 id=37% cov=98% --VYKVIELIGTSNDSWEKAAANAVEQAAKSLRDLRVAEVVKLDIQLDaKGKVEAYRAKLNVSFKFE >UniRef50_D2RSH5(2-65:66) Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RSH5_9EURY E=2e-10 s/c=1.05 id=35% cov=98% --VFKKITLIGTSTESFDDAADNAIDRAEDTLQNLYWIEVDELGVELASVEDRQYQAEVTVAFELE >UniRef50_C8XID8(3-63:69) Putative uncharacterized protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XID8_NAKMY E=2e-08 s/c=0.99 id=40% cov=94% --VQKAIDLSG-SGETIQDAVSEALDRARETLEGITRFEVKDITGIV-DGPHTAYQVEIRVWFTV- >UniRef50_D1R9J1(3-65:66) Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9J1_9CHLA E=7e-07 s/c=0.88 id=25% cov=97% --IVKVIEVI-SEGKSIDDAVKSAVAEAAKTVEDIKQVNVQHIEGIVKDNKVVNFRVNAKISFVVQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 707 * * * * * * * * 1368 * * * * * * * * 1 0 * * * * * * 2115 0 0 H 2 * * * * * * 396 * * * * * * * 2059 * * * * * 2 0 * * * * * * 2293 0 0 V 3 * * * * * * * 2906 * * * * * * * * 2524 530 * * 3 0 * * * * * * 3823 0 0 Y 4 2968 * * 4901 4451 * * * * 4817 * * * 4555 * * * 2030 * 1089 4 0 * * * * * * 3844 0 0 K 5 * * * * * * * * 222 * * * * * 3066 5441 * * * * 5 0 * * * * * * 3962 0 0 I 6 4629 * * * 4301 * * 2401 2401 5102 * * * * * * * 997 * * 6 0 * * * * * * 4049 0 0 V 7 * * * * * * * 939 * 2926 * * * * * 3636 3244 2636 * * 7 0 * * * * * * 4145 0 0 E 8 * * 3069 302 * * * * * * * 5118 * * * * 4609 * * * 8 0 * * * * * * 4145 0 0 L 9 4221 * * * * * * 1380 * 1422 5579 * * * * * * 2573 * * 9 0 * * * * * * 4141 0 0 T 10 * * * * * * * 1865 * 3650 * 4978 * * * 3600 3721 1134 * * 10 48 * 4939 * * * * 4141 0 0 G 11 1910 * * * * 541 * * * * * * * * 5978 5031 * * * * 11 56 * 4711 * * 0 * 4125 0 1000 S 12 * * 4197 2981 * * * 3866 * 5033 * 3761 * 4233 * 1957 1708 5104 * * 12 0 * * * * 0 * 4092 0 1000 S 13 * * * 4939 * * * * * * * * * * * 48 * * * * 13 0 * * * * * * 4141 0 0 P 14 5596 * 3051 3744 * 3878 * * 4204 * * 5324 1576 5068 5128 3934 2493 * * * 14 0 * * * * * * 4141 0 0 N 15 * * 3436 1996 * * * 5520 1905 * * 3803 * 3823 5150 * 2795 4223 * * 15 0 * * * * * * 4141 0 0 G 16 * * * * * 2423 * * * * * * * * * 362 4820 * * * 16 0 * * * * * * 4141 0 0 I 17 * * * * 2359 * * 2127 * 4341 * * * * * 4311 * 3805 1392 5385 17 0 * * * * * * 4141 0 0 E 18 5414 * 2103 670 * * * * 5028 * * * * 4150 * 5153 * * * * 18 0 * * * * * * 4141 0 0 E 19 5150 * 682 2690 * 5028 * * 5324 * * * * 2859 * * * * * * 19 0 * * * * * * 4141 0 0 A 20 0 * * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 4141 0 0 V 21 1894 * * * * * * 1822 * * * * * * * * 4301 1332 * * 21 0 * * * * * * 4141 0 0 N 22 3250 * 4699 5264 * * 5128 * 2237 * * 4713 * 2167 1923 4820 5068 * * * 22 0 * * * * * * 4141 0 0 N 23 5150 * * 2532 * * 4221 * 4195 * 5414 1264 * 4564 5347 3396 4487 4496 * * 23 0 * * * * * * 4141 0 0 A 24 442 * * * * 2431 * * * * * * * * * * 4221 5326 * * 24 0 * * * * * * 4141 0 0 I 25 * * * * * * * 1566 * 2714 4439 * * * 4221 * * 1285 * * 25 0 * * * * * * 4141 0 0 A 26 2186 * 2856 2448 * * 3444 * 3493 * * * * 3425 3678 4368 4707 * 5638 * 26 0 * * * * * * 4141 0 0 R 27 3753 * * 2283 * * 4221 * 2939 * * * 6013 3748 1434 * 4355 5185 * * 27 0 * * * * * * 4141 0 0 A 28 170 5261 * * * 4221 * * * * * * * * * * * 4978 * * 28 0 * * * * * * 4141 0 0 G 29 1906 * 4439 4699 * 4704 5150 * * * * 4431 * * 2676 1489 5434 * * * 29 0 * * * * * * 4141 0 0 E 30 5784 * 3438 2776 * 4978 * * 924 * * 5385 * 3488 4498 * 5185 * * * 30 0 * * * * * * 4141 0 0 T 31 * * * * * * * 4708 * * * * * * * 1887 532 * * * 31 0 * * * * * * 4141 0 0 L 32 * * * * * * * 2171 * 1223 3605 * * * * * * 1903 * * 32 0 * * * * * * 4141 0 0 R 33 * * 2323 3878 * * 4221 * 3479 5520 * 5261 * 4699 1256 5068 * * * 4218 33 0 * * * * * * 4141 0 0 H 34 * * 2764 5655 * 2691 2481 * 5150 * * 1234 * 5347 * 5560 * * * * 34 0 * * * * * * 4141 0 0 L 35 * * * * * * * 1038 * 1412 4529 * * * * * * 3414 * * 35 0 * * * * * * 4141 0 0 R 36 5414 * 2858 4161 * * 5128 * 2663 * * * * 4167 1930 2940 3669 5028 * 4699 36 0 * * * * * * 4141 0 0 W 37 5019 * * * * 2415 * * * * * * * 4930 4796 2134 * 3072 1450 * 37 0 * * * * * * 4137 0 0 F 38 2116 * * * 1548 * * 2355 * * * * * * * * * 2109 * * 38 0 * * * * * * 4137 0 0 E 39 * * * 772 * * * * * * * 4930 * 5506 3874 5152 * * 2690 3207 39 0 * * * * * * 4137 0 0 V 40 * * * * * * * 2392 * * * * * * * * * 305 * * 40 0 * * * * * * 4137 0 0 V 41 * * 4678 4432 * * * 3074 1678 4597 * 3649 * 3644 * * 2882 2770 * * 41 0 * * * * * * 4137 0 0 D 42 * * 2708 866 * 5130 4930 * 5294 * * 3210 * 4128 * 4432 * * * * 42 0 * * * * * * 4137 0 0 T 43 * * * 4432 3227 * * 2107 * 3204 3705 * * 2296 * 5130 2847 4095 * * 43 0 * * * * * * 4137 0 0 R 44 * * 3072 2843 * 4678 * * 4065 * * 3583 * 4519 1421 5237 3109 * * * 44 0 * * * * * * 4137 0 0 G 45 1935 4394 * * * 1416 * 3800 * * 3874 * * * * * * 2506 * * 45 0 * * * * * * 4137 0 0 H 46 3442 * 3394 3999 * * 2111 3513 * * * 4067 * 3410 5310 3102 4194 3622 * * 46 0 * * * * * * 4137 0 0 I 47 4207 * * * * * * 1823 * 2520 * * * * 4432 * 4962 1284 * * 47 141 4134 4796 0 * * * 4137 1655 0 E 48 4630 * 2423 1500 * * * * 2232 * * 4196 * 4208 5565 5151 5494 5229 * * 48 88 4084 * 0 * 0 * 4087 1659 1000 G 49 * * 1536 3638 * 2752 * * 4302 * * 2222 * 4207 * 3221 * * * * 49 0 * * * * * * 4137 0 0 G 50 4625 * 3631 * * 649 * * * * * 3224 * 5570 4432 5174 * 4678 * * 50 0 * * * * * * 4137 0 0 R 51 4390 * 5766 2347 * 4625 * * 1489 5506 5137 3819 4796 5121 4369 * 5771 4425 * 4600 51 31 * 5565 * * * * 4137 0 0 V 52 * * 4590 * 5602 * 4649 1495 5171 4068 * 4637 * * * * 4446 1435 * * 52 0 * * * * 0 * 4141 0 1000 N 53 2675 * * 3121 5625 5254 * 3367 * * * 4088 5565 * 4081 4255 2300 2391 * * 53 0 * * * * * * 4137 0 0 H 54 3205 * 4586 2564 * 4187 2555 * 3662 5130 * 4930 * 3980 4432 3727 3505 5565 * 5570 54 0 * * * * * * 4137 0 0 W 55 * * * * 2198 * * * * * * * * * * * * * 2830 641 55 0 * * * * * * 4137 0 0 Q 56 5176 * * * * * * * 3204 * * * * 1314 1267 * * 4432 * * 56 0 * * * * * * 4137 0 0 V 57 2572 * * * * * * 3874 * * * * * * * 4207 * 495 * * 57 0 * * * * * * 4137 0 0 T 58 * 5254 * 3378 * 4170 3596 5176 3072 * * 1893 * * 5152 * 2170 3774 * * 58 0 * * * * * * 4137 0 0 V 59 3119 3870 * * * * * 2768 * 1291 3648 * * * * * 4206 2974 * * 59 0 * * * * * * 4137 0 0 K 60 * * * 2781 * * * * 959 5548 * 4136 * 3480 2910 * 4678 * * * 60 0 * * * * * * 4137 0 0 V 61 4432 * * * * * * 1923 * 3245 * 4207 * * * 4625 * 1030 * * 61 0 * * * * * * 4137 0 0 G 62 2507 * * * * 1743 * * * * * * * * * 1687 2854 4625 4796 * 62 0 * * * * * * 4137 0 0 F 63 * * * * 209 * 5019 4432 * 5121 * * * * * * * * * 5116 63 0 * * * * * * 4137 0 0 T 64 4959 * * 2908 * * * * 2688 3054 * * * * 2054 * 2678 2626 * * 64 0 * * * * * * 4049 0 0 L 65 4708 * * * 5088 * * 3180 * 1169 4292 * 4267 * * * * 2034 * 5059 65 0 * * * * * * 3931 0 0 E 66 * * 2316 634 * * * * 3216 * * * * 4411 * * * * * * 66 0 * * 0 * * * 3754 0 0 //