HHsearch 1.5 NAME c2v6xB_ FAM FILE c2v6xB_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2v6xB_.a3m DATE Wed Mar 10 20:28:00 2010 LENG 41 match states, 41 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.4996 3.5473 SEQ >ss_dssp CCCCCCCHHHHTTCCCGGGGSSSSCCCCHHHHHHHHHHHCC >sa_dssp EEEEEEDEEEDEEDEEEEEEEEEEEEEEEEEDDEDEEEEEE >ss_pred CCCHHCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCC >ss_conf 95000668653147177776410378827799999876409 >Consensus hxlqstpqnlvsnapvaetxvgiaeppddxlqarlntlkkq >c2v6xB_ HXLQSTPQNLVSNAPIAETAXGIAEPPDDDLQARLNTLKKQ >UniRef50_Q9HGF7(4-52:53) YKL002w protein (Fragment) n=2 Tax=Saccharomycetaceae RepID=Q9HGF7_SACBA E=9e-10 s/c=1.32 id=88% cov=98% --LQSTPQNLVSNAPVAETIVGIAEPigagsdshgnPDDELQARLNTLKKQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * H 1 * * * * * * 0 * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 X 2 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 2 * * * * * * * 1000 0 0 L 3 * * * * * * * * * 0 * * * * * * * * * * 3 0 * * * * * * 1055 0 0 Q 4 * * * * * * * * * * * * * 0 * * * * * * 4 0 * * * * * * 1055 0 0 S 5 * * * * * * * * * * * * * * * 0 * * * * 5 0 * * * * * * 1055 0 0 T 6 * * * * * * * * * * * * * * * * 0 * * * 6 0 * * * * * * 1055 0 0 P 7 * * * * * * * * * * * * 0 * * * * * * * 7 0 * * * * * * 1055 0 0 Q 8 * * * * * * * * * * * * * 0 * * * * * * 8 0 * * * * * * 1055 0 0 N 9 * * * * * * * * * * * 0 * * * * * * * * 9 0 * * * * * * 1055 0 0 L 10 * * * * * * * * * 0 * * * * * * * * * * 10 0 * * * * * * 1055 0 0 V 11 * * * * * * * * * * * * * * * * * 0 * * 11 0 * * * * * * 1055 0 0 S 12 * * * * * * * * * * * * * * * 0 * * * * 12 0 * * * * * * 1055 0 0 N 13 * * * * * * * * * * * 0 * * * * * * * * 13 0 * * * * * * 1055 0 0 A 14 0 * * * * * * * * * * * * * * * * * * * 14 0 * * * * * * 1055 0 0 P 15 * * * * * * * * * * * * 0 * * * * * * * 15 0 * * * * * * 1055 0 0 I 16 * * * * * * * 1037 * * * * * * * * * 963 * * 16 0 * * * * * * 1055 0 0 A 17 0 * * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 1055 0 0 E 18 * * * 0 * * * * * * * * * * * * * * * * 18 0 * * * * * * 1055 0 0 T 19 * * * * * * * * * * * * * * * * 0 * * * 19 0 * * * * * * 1055 0 0 A 20 1037 * * * * * * 963 * * * * * * * * * * * * 20 0 * * * * * * 1055 0 0 X 21 * * * * * * * * * * * * * * * * * 0 * * 21 0 * * * * * * 1000 0 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 1055 0 0 I 23 * * * * * * * 0 * * * * * * * * * * * * 23 0 * * * * * * 1055 0 0 A 24 0 * * * * * * * * * * * * * * * * * * * 24 0 * * * * * * 1055 0 0 E 25 * * * 0 * * * * * * * * * * * * * * * * 25 0 * * * * * * 1055 0 0 P 26 * * * * * * * * * * * * 0 * * * * * * * 26 1037 963 * 3322 152 * * 1055 1000 0 P 27 * * * * * * * * * * * * 0 * * * * * * * 27 0 * * * * * * 1055 0 0 D 28 * * 0 * * * * * * * * * * * * * * * * * 28 0 * * * * * * 1055 0 0 D 29 * * 0 * * * * * * * * * * * * * * * * * 29 0 * * * * * * 1055 0 0 D 30 * * 1037 963 * * * * * * * * * * * * * * * * 30 0 * * * * * * 1055 0 0 L 31 * * * * * * * * * 0 * * * * * * * * * * 31 0 * * * * * * 1055 0 0 Q 32 * * * * * * * * * * * * * 0 * * * * * * 32 0 * * * * * * 1055 0 0 A 33 0 * * * * * * * * * * * * * * * * * * * 33 0 * * * * * * 1055 0 0 R 34 * * * * * * * * * * * * * * 0 * * * * * 34 0 * * * * * * 1055 0 0 L 35 * * * * * * * * * 0 * * * * * * * * * * 35 0 * * * * * * 1055 0 0 N 36 * * * * * * * * * * * 0 * * * * * * * * 36 0 * * * * * * 1055 0 0 T 37 * * * * * * * * * * * * * * * * 0 * * * 37 0 * * * * * * 1055 0 0 L 38 * * * * * * * * * 0 * * * * * * * * * * 38 0 * * * * * * 1055 0 0 K 39 * * * * * * * * 0 * * * * * * * * * * * 39 0 * * * * * * 1055 0 0 K 40 * * * * * * * * 0 * * * * * * * * * * * 40 0 * * * * * * 1055 0 0 Q 41 * * * * * * * * * * * * * 0 * * * * * * 41 0 * * 0 * * * 1055 0 0 //