HHsearch 1.5 NAME c2uwqA_ FAM FILE c2uwqA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2uwqA_.a3m DATE Thu Mar 11 19:13:26 2010 LENG 86 match states, 86 columns in multiple alignment FILT 54 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.8 EVD 0.4383 1.0585 SEQ >ss_dssp CCCCSSEEEEEECSSCSSCEEEEEECTTCBSHHHHHHSCSSCSSSCEEEEEETTEEEEECTTCBHHHHHHHHCSCGGGCEEEEECC >sa_dssp EEEEECDDACACCDEEEEDCBDCEBEEEDCAEBABDEBCEEDEEEBCABACCEEDEEEADCECDACDABEDBCEEDEDBEABCECE >ss_pred CCCEEEEEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHCCCCCCEEEEEECC >ss_conf 97230189999981786357312268753489999999626988769987408875131765675899997477512718996139 >Consensus xxxmxpmxlxVxvxxxerxvsgVpiTxxTTCxDVIxxxxxxGxxxxxLxExWRxxERxLxxxexilxxlxxWGxxxxeVxFxLRhx >c2uwqA_ GGSMMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEPGESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHE >UniRef50_UPI000186D520(1-79:98) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186D520 E=3e-27 s/c=1.54 id=40% cov=93% ---MVPIIVRVIC---EDVITDVPITPETTCYDVVECCRDPGDDLCNLVQIWRNYERILRSEDKPLEILQEWGPQQDEVKFVLRY- >UniRef50_C3Y562(21-102:457) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y562_BRAFL E=1e-16 s/c=1.06 id=31% cov=91% ----MPT-LRVWVDGEERTVSG--ISKRTTCGDVVkAMMTEYGLVEnghsYMLFERWRDCERTLPVDCRIMRVWKAWGPEQENVKFSLR-- >UniRef50_Q7QKM3(99-184:633) AGAP011031-PA n=3 Tax=Culicidae RepID=Q7QKM3_ANOGA E=6e-12 s/c=0.84 id=22% cov=67% ---------------------------DTTCGDLIEVLVQQEQGagaataspdvkDYCITERWRQVEQVLDNGTKIWQIWTAWGKAQPEVKFILR-- >UniRef50_A8PUT5(1-79:343) Putative uncharacterized protein n=1 Tax=Brugia malayi RepID=A8PUT5_BRUMA E=7e-12 s/c=0.91 id=26% cov=91% ------MEIRVIVDGIERSVSG--ITNSTTCAQIIyALAHATGqKGRFVLIEKFRDTERSLAPLDRPLEMLKKRGTHSRYVTFLLKH- >UniRef50_Q4SCC4(5-83:86) Chromosome undetermined SCAF14659, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4SCC4_TETNG E=7e-17 s/c=1.12 id=34% cov=71% -------------------------TEETTCQDvVIALAQALGQPGRYtLRETFKDFERCMSPGERLLETLEKYGEQAKEVQLKLHH- >UniRef50_Q5C2Z7(1-75:120) SJCHGC09473 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5C2Z7_SCHJA E=8e-09 s/c=0.82 id=18% cov=40% ---------------------------------------------------YRDEEVTLSPEERIISFIKGTKENPSNICFILR-- >UniRef50_Q02833(8-85:373) Ras association domain-containing protein 7 n=13 Tax=Eutheria RepID=RASF7_HUMAN E=2e-17 s/c=1.15 id=23% cov=90% ------MELKVWVDGIQRVVCGV--SEQTTCQEvVIALAQAIGQTGRFvLVQRLREKERQLLPQECPVGAQATCGQFASDVQFVLR-- >UniRef50_UPI000180C0C9(4-109:1419) PREDICTED: similar to ras-association domain family 10 n=1 Tax=Ciona intestinalis RepID=UPI000180C0C9 E=9e-14 s/c=0.74 id=27% cov=87% --------ITVRVGREEKEISG--LTRKTTCSEVLQALLKDKQTewnaarqnaeasttdelefnfsankslkeiaqGFVIVENWRGCEKPLPPRTRIFAV WQAWGKEQCHVKFSLK-- >UniRef50_B4J1V5(103-208:491) GH14363 n=1 Tax=Drosophila grimshawi RepID=B4J1V5_DROGR E=1e-13 s/c=0.73 id=29% cov=88% --------LPIWLNNNElRYVSGV--TYKTTCNDIIKALIDDQFGisnahnsninkklpndineklaaelrdynHYVITERWRGIERGYDGNMAILPVWR AWSRVHNELRLSLKH- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 G 2 * * * * * 0 * * * * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 S 3 * * * * * * * * * * * * * * * 0 * * * * 3 0 * * * * * * 1000 0 0 M 4 * * * * * * * * * * 0 * * * * * * * * * 4 0 * * * * * * 1966 0 0 M 5 * * * * * * * 2639 * * 570 * * * * * * 2591 * * 5 0 * * * * * * 2290 0 0 P 6 * * * * * * * * * * * * 0 * * * * * * * 6 0 * * * * * * 2290 0 0 M 7 * * * * * * * 4254 * * 462 * * * * * 2868 3567 * * 7 99 * 3921 * * * * 3250 0 0 F 8 * * * 1219 2358 * * 1630 * * * * * * * * * 4258 * * 8 0 * * * * 0 * 3130 0 1000 L 9 * * * * * * * 2650 * 634 5184 * * * * * * 2566 * * 9 0 * * * * * * 3732 0 0 T 10 * * * * * * * * 1486 * * * 3348 * 2519 3788 1748 * * * 10 0 * * * * * * 3732 0 0 V 11 * * * * * * * 3436 * * * * * * * * * 140 * * 11 0 * * * * * * 3762 0 0 Y 12 * * * * 4158 * * 2979 * * * * * * 4431 * * * 1043 1809 12 82 * 4181 * * * * 3762 0 0 L 13 * 4608 * * * * * 3190 * 1444 * * * * 4174 * * 1230 * * 13 60 * 4608 * * * 0 3660 0 1000 S 14 * 3760 2017 2780 * 4329 * * 4594 * * 3342 * * * 1540 * * * * 14 0 * * * * * 0 3614 0 1394 N 15 * * 2939 * * 1204 4331 * * * * 1931 * 3760 4329 * * * * * 15 0 * * * * 1000 1000 3614 0 1394 N 16 * * 4686 2369 * 3541 * 2224 4808 * * 2155 * * * 3612 4605 3563 * * 16 0 * * * * 0 * 3737 0 1000 E 17 * * 2582 1239 * * * * * * * * 3496 1640 * * * * * * 17 140 3436 * 0 * * * 3762 1088 0 Q 18 * * 4020 * * 4181 * * 2787 * * * * 2253 1026 4738 * * * * 18 0 * * * * * * 3762 0 0 H 19 5322 * * 4431 4715 * 3513 2562 * 3637 4638 4271 * * * 2957 4007 2490 * 3436 19 0 * * * * * * 3762 0 0 F 20 * * * * 3513 * * 2416 * 3032 * * * * * 4181 * 869 * * 20 0 * * * * * * 3762 0 0 T 21 * 1978 * * * * * * * * * * * * 4860 1311 1882 4738 * * 21 0 * * * * * * 3762 0 0 E 22 * * 3098 1840 * 727 * * * * * * * * * * * * * * 22 341 * 2250 * * * * 3762 0 0 V 23 * * * * * * * * * 4633 * * * * * * * 59 * * 23 1055 * 947 * * * 0 3522 0 2406 P 24 * * * * * * * * * * * * 0 * * * * * * * 24 0 * * * * 1493 633 2244 0 3051 V 25 * * * * * * * 1008 * 1437 * * * * * * * 2907 * * 25 0 * * * * 0 * 3710 0 2622 T 26 * * * * * * * * * * 5200 5273 * * * 2601 355 * * * 26 0 * * * * * * 4044 0 0 P 27 5479 * 5291 2110 * 4987 * * 2415 4385 * 4003 1869 * 3906 * * 6058 * 4810 27 0 * * * * * * 4044 0 0 E 28 4917 * 3149 1866 * * 3759 * 2634 * * 4556 * 3876 3304 3508 5126 5929 * * 28 0 * * * * * * 4071 0 0 T 29 * * * * * * * * * * * * * * * * 0 * * * 29 0 * * * * * * 4135 0 0 I 30 * * * * * * * 5663 * 4076 * * * * 4417 3476 389 5587 * * 30 0 * * * * * * 4135 0 0 C 31 5251 214 * * * * * * * * * * * * * 4141 * 4191 * * 31 0 * * * * * * 4135 0 0 R 32 2568 * * 5350 * 3749 * 5054 4233 5251 * 3929 * 1761 2823 3371 * * * 5363 32 0 * * * * * * 4135 0 0 D 33 5304 * 440 2418 * * * * * * * * * 5266 * 5350 * * * * 33 430 1955 * 0 * * * 4135 2320 0 V 34 * * * * * * * 2868 * 4507 5730 * * * * * * 322 * * 34 36 5350 * 0 * * * 4135 1000 0 V 35 * * * * * * * 898 * 3895 * * * * * * * 1336 * * 35 171 3164 * 0 * * * 4135 1847 0 D 36 1344 * 3970 2132 * * * * 3277 * * * * 2622 4370 * * * * * 36 0 * * * * * * 4135 0 0 L 37 2315 3490 * * 3744 * * * * 1248 4376 * * * * * * 2876 * 5054 37 0 * * * * * * 4135 0 0 C 38 1459 1895 * * * * * * * 1569 5041 * * * * * * * * * 38 27 5762 * 2322 322 * * 4135 1000 0 K 39 * * * * * * 3622 3929 2373 2024 * * * 2032 3136 * 5041 5290 * * 39 0 * * * * * * 4135 0 0 E 40 1610 * 2961 1379 * * 5253 * 5128 * * * * 4831 * 3844 * * * * 40 31 * 5554 * * * * 4135 0 0 P 41 4005 * 2020 4938 * * * 3323 * 3472 * * 2184 5257 * * 2386 * * 5017 41 24 5939 * 5555 31 0 * 4123 1000 1000 G 42 * * * 3581 * 477 3274 * 5128 * * * * 3923 * * * * * * 42 38 5266 * 0 * * * 4135 1000 0 E 43 * * 3654 1879 4883 * * * 2926 5041 * 4405 5968 1694 3631 * * * * * 43 198 2964 * 3455 138 * * 4135 2563 0 S 44 * * 5363 4222 * 2224 * * * * * 3943 4674 5857 * 2854 1438 3659 * * 44 318 2338 * 4101 87 * * 4135 2341 0 D 45 * * 2414 3262 * 1422 4883 * 4972 5363 * 5251 * 4935 3689 3207 * * * * 45 107 3801 * 3398 144 * * 4135 1774 0 C 46 * 1812 * * 2534 * * * * * * * * * 1679 * * * * 2119 46 0 * * * * * * 4135 0 0 H 47 * 2620 4701 * 3107 * 2655 * * * 5041 4332 * * * * 5554 2788 * 1847 47 574 1607 * 0 * * * 4135 2551 0 L 48 * * * * * * * 1736 * 567 5335 * * * * * * * * * 48 0 * * * * * * 4183 0 0 A 49 2474 * * * 4176 * * 2489 * 4004 5547 * * * 4559 5683 2855 1724 * * 49 0 * * * * * * 4183 0 0 E 50 4704 * * 291 * * * * * * 4585 * * 3281 * * * * * * 50 0 * * * * * * 4137 0 0 V 51 6732 * * * * * * 5354 1605 4562 4692 5150 * 5644 1715 5682 4714 2777 * * 51 0 * * * * * * 4137 0 0 W 52 * 4752 * * 3936 * * * * 3116 * * * * * 5325 * * 507 4217 52 0 * * * * * * 4211 0 0 C 53 * 5688 * * * 5750 5377 * 4116 * * * 4023 5554 380 5102 * * * * 53 0 * * * * * * 4224 0 0 G 54 * * 2118 3040 * 1199 * * 4440 * * 3654 * 4589 * 5000 6119 * * * 54 0 * * * * * * 4224 0 0 S 55 * 3787 * 5492 2926 * 3927 3891 3235 5493 5731 3607 * * * 2892 3094 3105 * 4530 55 54 4757 * 0 * * * 4224 1000 0 E 56 * * * 0 * * * * * * * * * * * * * * * * 56 0 * * * * * * 4222 0 0 R 57 * 4765 * * * * * 5682 4439 * * * * 3738 321 * * 5492 * * 57 0 * * * * * * 4222 0 0 P 58 4272 4656 * * 5289 5271 5323 2933 * 4440 4559 5634 2639 2993 5529 4405 3821 2585 * * 58 0 * * * * * * 4222 0 0 V 59 * * * * * * * 3855 * 484 4606 * * * * * * 3220 * 3885 59 0 * * * * * * 4222 0 0 A 60 2964 * 2556 4594 * 4023 5323 * * 4052 6217 * 1639 * 4052 3206 6569 * * * 60 0 * * * * * * 4222 0 0 D 61 3903 5871 3849 3305 4873 3676 * * * 5289 * 3809 1185 * 4516 5410 * 5104 * * 61 0 * * * * * * 4222 0 0 N 62 * * 3402 2968 * 4416 5138 * 4452 3299 * 2413 5990 3363 3932 4510 2938 * * 6113 62 0 * * * * * * 4222 0 0 E 63 * 5104 2641 1270 * * 4873 * * 5089 3885 * * * * 4551 2171 * * * 63 0 * * * * * * 4222 0 0 R 64 3530 3207 * * * * 3774 * 2053 5089 4873 4325 * * 1594 5323 * 5545 * * 64 0 * * * * * * 4222 0 0 M 65 * * * * * * * 1240 * 3828 3162 * 1342 * * * * * * * 65 0 * * * * * * 4222 0 0 F 66 * * * * 3926 * * 3386 * 753 3576 * * * * * * 4881 5270 3302 66 0 * * * * * * 4222 0 0 D 67 5199 * 3227 1859 * 5560 * * 2919 * * 5682 3885 3276 2626 4932 4705 6221 * * 67 0 * * * * * * 4222 0 0 V 68 4068 5488 * * 4141 * 4281 2161 * 2146 5370 5728 * * * 4117 4554 2203 * * 68 0 * * * * * * 4222 0 0 L 69 * * * * * * * 4584 * 845 * * * 5560 * * * 5728 1468 * 69 0 * * * * * * 4222 0 0 Q 70 2905 5889 6084 3920 * * * * 2828 5002 5429 4008 * 1851 3485 3792 4645 6113 * 5764 70 0 * * * * * * 4222 0 0 R 71 1556 * * 4540 * 5492 5558 5830 1930 * 5488 5728 * 2848 3441 * 5560 * * * 71 0 * * * * * * 4222 0 0 F 72 * 4909 * * 4697 * * * * 3903 * * * * 5370 6060 4584 * 436 4606 72 0 * * * * * * 4222 0 0 G 73 * * * * * 203 * * 4584 * * * * * 5529 3885 * * * * 73 0 * * * * * * 4222 0 0 S 74 5889 * 3367 2360 * * * 5907 3540 * * * 2825 2259 3885 3261 4455 * * 5558 74 0 * * * * * * 4222 0 0 Q 75 3738 * * 2319 5560 4765 3016 * * 3697 5323 4584 * 2830 3602 * * 3885 * 3203 75 0 * * * * * * 4222 0 0 R 76 2531 * * * * 4455 3885 * 3941 * * * 4584 1875 2322 2896 * * * * 76 0 * * * * * * 4222 0 0 N 77 3413 5199 4199 4031 * 5408 * * 3190 4765 * 2346 2434 4569 4683 2937 * * * * 77 0 * * * * * * 4222 0 0 E 78 * * 3116 1015 5894 * 5199 * * * * 2162 * 5375 * 4746 * 4765 * 5370 78 0 * * * * * * 4222 0 0 V 79 * * * * * * * 4095 * 2914 5829 * * * * * * 338 * * 79 0 * * * * * * 4222 0 0 R 80 * 3950 * * * * 4445 * 1927 * * 5990 * 1995 1912 5089 3950 * * * 80 0 * * * * * * 4222 0 0 F 81 * * * * 481 * * 4638 * 2846 * * * * * * * * * 3263 81 33 5475 * 0 * * * 4222 1000 0 F 82 * 4369 * * 2796 * 5751 2230 5553 3784 5492 * * * 6519 2749 4442 2351 * 4107 82 0 * * * * * * 4136 0 0 L 83 * * * * * * * * * 0 * * * * * * * * * * 83 0 * * * * * * 4136 0 0 R 84 * * * * * * 4817 * 2399 * * * * 3206 585 * * * * * 84 0 * * * * * * 4456 0 0 H 85 * * 3656 * * * 249 * * * * * * * * * * * * 3656 85 0 * * * * * * 3266 0 0 E 86 * * 2638 253 * * * * * * * * * * * * * * * * 86 0 * * 0 * * * 1983 0 0 //