HHsearch 1.5 NAME c2rs2A_ FAM FILE c2rs2A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2rs2A_.a3m DATE Sat Dec 31 16:58:38 2011 LENG 84 match states, 84 columns in multiple alignment FILT 106 out of 7387 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.6 EVD 0.4491 1.4038 SEQ >ss_dssp CCEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSSCEEETTEEEEEEECCCCCCCCC >sa_dssp ECACABDBBEEBECEBAEEBADEBCEAEDBDBCEDEEEEEAECBACACAEEDDBAEDBEEDEEBDCDEEEBDBDEBEEEEEEEE >ss_pred CEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEHEEHHHHHHHHHHHHCCCEECCEEEEEEEEECCCCCCC >ss_conf 969987877878999999987202554431011134443432100000000179999998389797887999998100020799 >Consensus CrlfVxnLpxxxtexxlxxxFxxxgxxxxxxxxxxxxxxxxxxxafvxfxxxxxaxxaxxxxxxxixgrxixVxxaxxxxxxpk >c2rs2A_ CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPK >UniRef50_A7TK65(144-226:760) Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TK65_VANPO E=1e-08 s/c=0.73 id=17% cov=99% --LYIKGIPKDLSIDDLVPVFSTFGDIISMKIIQDSITGISLGYGFLSYRLGSQSSSCMSKlNGQIMNGSTLFINYHVERKERER >UniRef50_A9USE7(16-85:1117) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9USE7_MONBE E=0.0003 s/c=0.66 id=17% cov=83% -RIIVKNLPKHIQEPRLRELFAKYGELTQVKLLSKRR------MAYIGFKDVDSATAAVsKENDVFVDTSKIEVAHA-------- >UniRef50_Q503D7(84-166:471) Zgc:110682 n=4 Tax=Euteleostomi RepID=Q503D7_DANRE E=5e-12 s/c=0.87 id=17% cov=99% -KVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPS-SLTGYAFVYMEHKEDAEQAIEgLHGTTFMGRPLAVELSKVQQSTNK >UniRef50_C3ZC12(416-499:678) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZC12_BRAFL E=4e-06 s/c=0.63 id=14% cov=101% CCMHVWNLPYKASKREIENFFTGSTIAERGIHMVYTKTGEFSGEVFVEFVSISDCDRAYKLRAKRLGGRMALLRPISREEMRDR >UniRef50_D0N9R1(182-267:907) U2-associated splicing factor, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N9R1_PHYIN E=0.0009 s/c=0.52 id=11% cov=44% ------------------------------------------------YERRDADDARVNLDNKQLEGQPMIVGWGKAVKIQPR >UniRef50_A6S535(76-162:466) Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6S535_BOTFB E=0.0003 s/c=0.53 id=14% cov=100% -RIYVGNLSYDTTPEDIETIFQDVPRESRtvHMSIDSMTKRNPGYCFVTFTTKDMAEEALTRYDGQEFKNRTLRVKPGVRsdRSTRPQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * C 1 * 0 * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 5895 0 0 K 2 5578 4254 * * * * * * 1547 * * 5764 * 5363 1086 * 4406 * * 5406 2 0 * * * * * * 7884 0 0 M 3 6350 * * * * * * 1994 * 1202 4871 * * * * * * 1901 * * 3 11 6997 * 2000 415 * * 8659 1000 0 F 4 * * * * 1222 * 3780 4050 6448 * * * * * 6537 * * 4977 5806 1449 4 0 * * * * * * 8655 0 0 I 5 * 4929 * * 6494 * * 1949 * 3263 5606 * * * * * * 805 * * 5 0 * * * * * * 8636 0 0 G 6 4757 6953 5277 4528 * 1208 * * 3404 * 5584 6405 6383 5850 3084 3136 4602 * 6392 6412 6 17 * 6448 * * * * 8635 0 0 G 7 * * 4244 6463 * 1920 5674 * 5605 * * 870 5659 5930 5950 6613 6650 * * 6404 7 0 * * * * 0 * 8645 0 1000 L 8 * * * * 5122 * * 1898 * 788 4745 * * * * * * 3531 * * 8 0 * * * * * * 8657 0 0 S 9 3384 5691 3715 * * 5815 4757 * 6480 6112 * * 946 * * 2533 5250 * * 6619 9 0 * * * * * * 8657 0 0 W 10 3712 * 5281 5651 2894 * 5760 * 3123 4050 6756 5170 3225 3970 3832 4433 4640 5156 3947 3432 10 18 6345 * 2000 415 * * 8657 1000 0 Q 11 4494 * 2488 2798 6777 3555 4433 * 3752 * * 3338 * 4832 4791 2954 3418 * 6845 5832 11 0 * * * * * * 8657 0 0 T 12 3235 3938 * 6112 4725 * * 3340 6339 3117 3613 * * * * 4754 2110 2673 5328 5812 12 11 7090 * 1000 1000 * * 8657 1000 0 T 13 * * 3086 5249 6639 4892 * * 3973 5683 * 3673 6619 * 4306 2757 1247 5581 * * 13 0 * * * * * * 8657 0 0 Q 14 4368 * 2658 1397 * * 6399 5195 3179 6873 * 5762 5689 3644 5684 5036 4616 5838 5757 6538 14 0 * * * * * * 8657 0 0 E 15 3356 * 2447 1974 6468 6319 * 5429 4146 6742 * 5349 6639 3352 4002 3701 4751 5690 * 5430 15 0 * * * * * * 8657 0 0 G 16 4773 * 1621 2120 * 5695 4713 6811 4467 * 5048 * * 3726 6565 3954 4090 5124 5957 6319 16 0 * * * * * * 8657 0 0 L 17 * 6404 * * 4966 * * 2091 * 971 4766 * * * * * * 2518 * * 17 23 5957 * 0 * * * 8657 1000 0 R 18 6527 * 6666 3308 4922 6468 4154 4377 2256 3691 4196 5433 * 3666 2221 6999 5123 * * 4817 18 0 * * * * * * 8657 0 0 E 19 3679 * 2816 2222 5780 5531 6551 6990 2965 * 6112 2954 * 4135 4284 3899 4050 * * * 19 0 * * * * * * 8657 0 0 Y 20 3663 * * 4372 2505 * 3217 3056 5733 2421 5805 * * * * 6853 5937 3580 6488 2992 20 13 * 6842 * * * * 8657 0 0 F 21 6460 4877 * 5954 413 * * 5074 * 3311 5619 * * * * * * 5185 * 6769 21 56 4724 * 2018 409 * 0 8651 2981 1000 G 22 3698 * 5431 2739 * 3039 * * 3472 * 5161 3553 * 3900 4436 2127 4075 6483 * 6339 22 28 5715 * 1474 644 * 0 8651 1748 1000 Q 23 3968 6559 3564 3558 5809 3790 5645 * 2591 * * 4046 3501 3090 4769 3254 4159 * * 5954 23 13 6801 * 0 * 0 * 8651 1000 1000 F 24 3938 4697 * 5727 2389 5219 3725 4150 5652 3895 * 5483 6881 4786 6439 4480 5766 3613 6319 2290 24 101 4371 5683 2644 252 * * 8657 3334 0 G 25 3928 6820 6262 5774 4563 1097 * 6810 5985 6677 4367 4251 4432 * 5626 5263 4121 4752 * 4018 25 16 6483 * 0 * 980 1020 8613 1000 1731 E 26 4882 * 3537 4483 5864 3221 4756 3662 4542 * 6451 4150 2937 4378 3740 4134 3236 4336 * 5796 26 39 5223 * 1617 569 0 * 8654 2345 1000 V 27 4423 * 6870 4270 5780 4668 * 2128 6345 3844 5764 5719 4282 5034 5726 4427 3712 1922 * * 27 42 5772 6619 1991 418 * * 8657 1750 0 K 28 4933 6804 4149 2843 6822 5954 6525 4395 2753 3662 * 3924 6761 5266 4648 4376 3819 2495 * 6109 28 30 6804 6394 2322 322 * 0 8641 1000 1000 E 29 4349 * 3476 3197 * 3600 4688 3582 4135 6816 5643 3733 4771 4564 4055 3186 4641 3838 * 5195 29 43 5080 * 1727 519 981 1019 8617 2401 1828 C 30 3386 4194 4283 5495 5253 4609 5644 2634 * 3928 5063 4145 6092 * 4627 4373 5744 2175 5573 6468 30 35 5369 * 2127 375 * 0 8633 1763 1000 L 31 6718 * 4662 4685 4496 6749 5174 3003 3589 4269 5684 4186 6842 4744 2560 4520 4350 2587 6482 6537 31 12 6945 * 1585 585 0 * 8633 1000 1000 V 32 5314 6757 5106 4726 4358 * 5556 2360 3890 2304 4219 6345 4585 * 4011 4311 6488 3471 5698 5422 32 44 5624 6657 3186 168 * * 8657 1804 0 M 33 4307 6698 5444 * 5050 6466 6555 2802 3930 3244 3786 5213 3105 5611 5015 4414 5076 2585 * 4648 33 24 6853 6950 1585 585 0 * 8638 1000 1000 R 34 4785 5476 4140 4827 5802 5346 5819 4322 2761 4175 4552 6819 5272 5358 3113 3463 3448 3744 6609 4276 34 75 5546 5099 2000 415 0 * 8655 1730 1000 D 35 6728 * 1876 3709 6839 4444 4847 5283 3752 4799 * 3717 3643 6612 4767 4023 4531 4266 * 4142 35 73 4925 5923 1179 841 0 * 8612 2317 2476 P 36 * 5726 3877 4228 * 3754 * 5132 2535 5566 4764 4426 2934 3914 2694 3462 5683 6761 * 6820 36 12 6963 * 1000 1000 945 1057 8659 1000 1794 L 37 3615 * 3086 3736 5209 3885 6476 * 3215 4589 6510 3482 4390 3133 3833 3939 4720 5257 * 6823 37 67 6732 4792 3170 170 * 0 8655 1000 1000 T 38 5041 6669 4112 3853 * 3256 * 4815 3521 5455 * 3486 4482 5540 4786 2834 2122 * * 5586 38 0 * * * * 349 2217 8662 0 3189 K 39 4455 6539 3921 5319 6606 1900 5069 * 2898 * 6610 4551 5079 4508 3265 3647 4215 5299 * 5585 39 18 6347 * 2000 415 0 * 8637 1000 1000 R 40 3997 6873 5580 5014 5593 4325 5783 5962 2289 4488 4996 3831 4374 4391 3020 3712 3853 5787 * 4692 40 0 * * * * * * 8657 0 0 S 41 4578 5785 5796 5292 4659 3649 4202 4380 4045 3567 5780 4144 3917 6345 3503 2245 5556 5167 * 5144 41 30 5616 * 2415 300 * * 8657 1797 0 R 42 4756 6652 * 5060 6890 3570 5503 * 2331 4213 6112 5668 5122 5181 2062 3546 3797 5295 * 4548 42 24 6927 6890 1000 1000 * * 8657 1000 0 G 43 4597 5115 5876 * 5536 1387 * * 4139 4726 6836 4050 4479 4593 3113 5232 5465 5186 * 3906 43 67 5709 5263 0 * 0 * 8655 1789 1000 F 44 4581 3543 * 5548 1802 4127 6516 3746 * 6668 5587 6595 * 5763 5358 4646 4284 4317 * 2350 44 14 6700 * 2807 222 0 * 8652 1000 2354 G 45 1136 3531 6531 * 3986 1847 * 6271 * 6346 * * * * * * * 4644 * 4601 45 12 * 6950 * * * * 8665 0 0 F 46 * 5001 * * 960 5518 6266 4226 5650 4657 6392 * * * * * 5295 3795 * 2340 46 26 6996 6625 0 * 0 * 8662 1000 1000 V 47 4228 4874 5943 6725 4272 * * 2058 * 3666 * * * * * 6517 5175 1067 * * 47 16 6503 * 1000 1000 * 0 8649 1000 1000 T 48 5938 6691 4073 2040 3485 4583 6729 5088 4350 4096 6734 * * 3579 4264 4818 2897 4010 * 5855 48 0 * * * * 0 * 8649 0 1000 F 49 6531 6832 * 5963 780 6742 * * * 4048 4005 * * * * 4666 4592 6341 * 2675 49 0 * * * * * * 8665 0 0 M 50 3614 6400 4129 2330 5511 6357 * 6660 4321 6271 4172 4662 3806 4710 4818 2907 3514 3951 * 5812 50 0 * * * * * * 8665 0 0 D 51 6541 5609 2653 3591 5729 7107 5199 5966 4215 * * 2944 5963 5859 4107 2253 2736 6621 * 6341 51 16 6459 * 0 * * * 8665 1000 0 Q 52 3137 6838 4396 2851 * 5824 4317 3634 4067 5766 * 4745 2896 4458 4444 3698 5072 3508 * 7107 52 10 7189 * 0 * * * 8665 1000 0 A 53 3743 5583 2550 1571 7094 4520 6736 4800 4350 5605 5723 5276 * 4152 5042 3612 6758 6813 * * 53 16 6541 * 0 * * * 8665 1000 0 G 54 2399 5753 2528 2718 6358 4171 4034 5358 * 4322 * 6821 6908 5749 6511 2582 5659 5065 * * 54 31 6412 6716 0 * * * 8665 1000 0 V 55 877 5487 * 6579 * 6530 * 5090 4858 4374 5129 * * 6505 6359 5178 3715 2881 * 6871 55 0 * * * * 0 * 8640 0 1000 D 56 3283 * 3405 2625 * 6358 6672 5162 3292 3818 5440 3602 4760 3552 3767 5211 4071 5047 * * 56 14 6677 * 2000 415 * * 8665 1000 0 K 57 2294 * 4093 3868 * * * 5086 2400 4136 6738 4108 * 4203 2879 4300 5179 4366 * 6832 57 0 * * * * * * 8665 0 0 V 58 795 3535 * * 4725 5344 * 4477 5528 4099 5567 * * * * 5534 5778 3486 * * 58 19 6272 * 0 * * * 8665 1000 0 L 59 4778 5684 6327 4945 5214 * 6511 2395 4728 1581 3362 * * * 3778 7722 5024 3765 * 5648 59 102 3867 * 0 * * * 8665 4105 0 A 60 2595 5518 5639 2308 * 5284 5093 5946 2341 5137 6367 3864 * 3987 3939 4533 * 6412 6327 5854 60 303 2487 6540 402 2039 * * 8665 6050 0 Q 61 3139 * 5575 3612 4839 6719 4773 * 4435 1682 2976 4208 * 4761 4365 4403 6403 * * 5710 61 184 3060 * 192 3005 * 0 8659 5289 1000 S 62 5377 * 2599 * 6559 5116 3549 5786 5291 5677 5661 1671 5920 4770 3808 3238 4383 6567 * * 62 14 * 6679 * * 0 * 8640 0 1000 R 63 6432 * 4961 4100 5622 1443 5639 6457 3210 6753 5538 3475 3492 4315 5305 5791 4158 * * 6494 63 34 5413 * 1655 551 0 * 8647 1796 1000 H 64 5890 6826 * 4702 4162 4752 3415 3578 3025 5321 4706 5129 5637 4104 4145 3273 3085 4701 * 4155 64 39 5803 6823 0 * * * 8647 1703 0 E 65 6717 6507 4733 3369 5779 * 5614 4029 3131 2978 4633 5648 6280 4018 3610 3952 3940 3705 5473 4097 65 78 4255 * 965 1036 * 0 8640 3338 1000 L 66 * 6574 * * 2623 * 6428 1573 6567 1842 4652 * 6258 * * * * 3265 6308 5613 66 44 5060 * 2678 245 0 * 8640 2342 1000 D 67 5894 5680 2384 4691 5551 2292 4792 6752 3823 3872 4371 3201 * 5645 3821 5198 6529 * 6347 5301 67 29 5646 * 1538 609 * * 8647 1788 0 S 68 * * 3667 4254 6906 645 * * 5272 * * 3265 6549 5875 * 4445 5837 * * * 68 13 6826 * 1000 1000 * * 8647 1000 0 K 69 * * * 5152 6438 6796 3698 5810 2212 6328 * 3783 * 3900 1387 3806 6619 6241 6473 * 69 40 5185 * 0 * * * 8647 2329 0 T 70 5814 * 5114 4159 * 5229 6633 5583 2442 4689 4344 5120 2520 3717 3070 4271 3851 4703 * 6630 70 12 6898 * 0 * * * 8647 1000 0 I 71 4663 6112 * * 6484 * * 1734 * 1669 3729 * 6686 * * * 6550 2159 * * 71 0 * * * * * * 8647 0 0 D 72 4374 * 4368 3996 4012 6854 4234 4884 2672 4701 6507 3527 6516 6544 2628 4072 4015 4083 * 5254 72 0 * * * * * * 8634 0 0 P 73 4410 4210 * * * 6689 * 2111 * 3631 5598 * 6858 * * * * 868 * * 73 31 6525 6589 0 * * * 8634 1000 0 K 74 5600 6825 2959 2871 * 5464 6532 * 2266 6768 5810 4105 * 3566 2702 3582 4874 5439 * * 74 24 * 5938 * * 0 * 8592 0 1000 V 75 5124 * 6661 4681 3025 * 5634 4263 3534 3245 * 6741 2948 6336 2981 * * 3351 3313 4082 75 28 * 5687 * * 964 1037 8573 0 1756 A 76 811 5682 * 6256 6696 4998 * 4393 5598 * * * * 6686 5574 2360 5808 5373 6368 6846 76 15 * 6629 * * 1249 788 8499 0 1857 F 77 * 6513 3386 3484 4941 5573 6216 5463 2627 3367 5656 4068 5410 4592 3702 4476 3805 3765 * 4501 77 83 4159 * 425 1972 0 * 8495 3200 2057 P 78 3514 * 5025 4626 6421 4419 * 5404 6837 6760 * 6225 1286 4983 4816 2901 3838 4411 * * 78 65 5533 5457 612 1532 * * 8500 1805 0 R 79 3962 * 4844 2855 6476 6274 5162 6514 2151 * 6389 4487 5495 3495 1930 4479 * * * * 79 17 6455 * 2000 415 948 1054 8418 1000 1788 R 80 3886 * 3712 2600 * 4170 * * 3268 * 5974 6459 3485 3105 2357 4155 5342 5451 * * 80 0 * * * * * 0 8358 0 1000 A 81 2798 * 3893 3134 * 4751 * 6355 2556 6142 4188 4494 3955 6285 3786 3144 4651 6183 * 5286 81 69 5005 6018 1548 604 0 * 8224 1755 1000 Q 82 5959 * 6166 4014 * * 6017 * 2301 6209 5763 4254 4963 2206 1647 5345 6306 * * * 82 26 5792 * 1585 585 0 * 8140 1000 1000 P 83 5724 * 3356 4160 * * * 5491 3795 * * 4520 704 4716 * 5713 5744 * * * 83 0 * * * * * * 7812 0 0 K 84 * * * 2796 * * * * 1146 * * * * 3454 1676 * * * * * 84 0 * * 0 * * * 7514 0 0 //