HHsearch 1.5 NAME c2rf0D_ FAM FILE c2rf0D_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2rf0D_.a3m DATE Sat Mar 13 15:14:23 2010 LENG 61 match states, 61 columns in multiple alignment FILT 118 out of 2358 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4717 1.9058 SEQ >ss_dssp CCEEEECSCBCCSSTTBCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEEC >sa_dssp EEDCCACEECDDECEEBADADEECEACBDCEDDEECECDDCBBACBEEDDDBCABCECBCE >ss_pred CCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCC >ss_conf 9769980033787796711759998999982378877897289998899899991000269 >Consensus GxxxxalydfxaxxxxeLsxxxGdxixvxxxxxxxxxxxgWxxgxxxxgxxGxvPxnyveP >c2rf0D_ GPVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP >UniRef50_B6K6X9(537-605:675) BZZ1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K6X9_SCHJY E=3e-05 s/c=0.72 id=25% cov=92% --TVQVLYDYVGTTDDDLNVKEGQMVVILQPDGmldksllcvgltPYLDGTGWVRARSGS-AEGLVPASY--- >UniRef50_B0XIU5(16-67:782) SH3 adapter protein SPIN90 n=2 Tax=Culicini RepID=B0XIU5_CULQU E=2e-07 s/c=1.09 id=25% cov=87% ----KALYDFTAVYPKTISFDEGEYFILHQTSARQR---NWWQVVSMKGNIGFVPSNYV-- >UniRef50_B6HBF2(10-68:969) Pc18g03880 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HBF2_PENCW E=8e-07 s/c=0.93 id=24% cov=97% GDILEVLHEFGGRGEDELIMLPRDKIELIELDEGFG--DAWYYGKnLRTGQTGLFPANFTT- >UniRef50_Q4SME7(700-754:775) Chromosome 8 SCAF14552, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SME7_TETNG E=2e-06 s/c=0.98 id=24% cov=90% -PQMQCIRAFVAQQPDELSLEKADIILVHQQ-----SSDHWVEGtRLSDRHRGWVPQSHLE- >UniRef50_UPI000186F14A(235-293:348) Peroxisomal membrane protein PEX13, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F14A E=8e-06 s/c=0.88 id=22% cov=98% GSLGIGMYDFYAASNQELSISSQQKLMIAPKKFQPTDCPGWILACNENSKIGLVPSNYI-- >UniRef50_Q4PHB9(7-74:1480) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PHB9_USTMA E=0.001 s/c=0.66 id=23% cov=98% --LARATTKYKSPHKQDLTFAKRETIRVTGVAPKTDTaddeddddDDDWLVGETLDGsKSGIFPGSFVEP # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 5679 0 0 P 2 * * 2660 3804 5035 4241 4713 * 4956 5256 * * 1807 * 5099 3100 2656 * * * 2 36 5354 * 1000 1000 * * 6163 1000 0 V 3 * 6224 * 5022 * * * 2700 4337 2155 6082 6238 * 4610 4734 * 2835 2189 * 4012 3 0 * * * * * * 6815 0 0 W 4 3275 3451 * * 2833 5102 * 6691 6424 3961 4649 * * * * * 6652 1765 5980 2394 4 0 * * * * * * 7019 0 0 T 5 * * * 5499 5737 * 6434 3982 2690 6128 6744 6830 * 3570 1884 * 3306 2055 * * 5 15 6591 * 1000 1000 * * 7126 1000 0 A 6 793 3805 * * * 5088 * * * 6558 6728 * * * * 4223 5082 2193 * * 6 0 * * * * * * 7126 0 0 V 7 6679 * * 6467 * * 6665 2556 3678 1194 4353 7030 * 6528 6913 4751 3929 3249 * * 7 0 * * * * * * 7132 0 0 F 8 3769 5722 6753 4380 2646 * 3586 * 4780 * * 5305 * 6872 4670 5833 6732 5135 6720 1208 8 0 * * * * * * 7132 0 0 D 9 3660 6451 1164 4530 * 5402 6781 * 5105 * * 3497 3184 5543 6868 3399 4845 * * * 9 0 * * * * * * 7132 0 0 Y 10 * 4826 * * 1101 * 4096 * * * * * * * 5510 * * * 6533 1295 10 25 5865 * 607 1542 * * 7132 1536 0 E 11 4493 5133 3780 2531 6720 6583 7268 4434 3336 5374 * 3893 * 3799 4328 3366 3152 3987 * 5377 11 0 * * * * * * 7132 0 0 A 12 1287 * 5824 * * 2596 * * 6157 6858 6568 * 2458 6704 5417 3379 4522 5700 * * 12 48 5417 6766 2487 283 * * 7132 1921 0 A 13 4080 * 3285 3076 * 5043 6850 6863 4492 * 5523 4627 5729 2898 2894 3140 2868 5180 * * 13 0 * * * * 0 * 7121 0 1000 G 14 3882 7055 2705 3112 5752 3467 4548 4636 7202 * 6369 3429 4832 4482 4430 2720 5209 4738 * 6727 14 10 7132 * 3000 193 * * 7127 1000 0 D 15 3488 * 2543 2169 5665 5902 7290 5166 4594 6754 * 4097 2095 5714 7165 4835 5608 5531 * * 15 27 5731 * 624 1511 * * 7127 1584 0 E 16 3899 6899 1961 3536 * 2588 6966 * 4276 6469 6388 3240 6625 4124 6753 4308 3813 5690 * 6839 16 58 5930 5459 2322 322 * * 7127 1661 0 E 17 5258 6480 2369 906 * 6940 4082 * 5731 5904 6708 7227 * 3624 * 6246 5501 * * * 17 13 6845 * 1000 1000 0 * 7122 1000 1204 L 18 6559 * * * * * * 3427 * 405 4035 * * * * * * 3905 6200 * 18 0 * * * * * * 7127 0 0 T 19 4454 6388 4759 3545 * 4113 5952 6587 * * * 4679 3737 6659 5545 1157 2818 * * * 19 0 * * * * * * 7127 0 0 L 20 5585 6986 * * 1419 * * 2777 * 2113 4311 * * * * * 6469 2657 * * 20 0 * * * * * * 7127 0 0 R 21 3816 6209 4455 3302 6840 6481 5201 5788 2110 4319 7309 4558 5986 4297 2855 3816 4960 4229 * 6443 21 0 * * * * * * 7127 0 0 R 22 3104 6443 6481 1960 * * * 4823 2228 7380 * 6659 3777 4110 3078 5506 5017 4750 * * 22 0 * * * * * * 7127 0 0 G 23 5553 * 3448 * * 448 6209 * * * * 3430 * 6207 5659 6120 * * * * 23 0 * * * * * * 7127 0 0 D 24 4869 * 893 2061 * * * * * * 7071 * * 2853 * * 5006 6559 * * 24 0 * * * * * * 7127 0 0 R 25 6860 6004 * 5429 6204 * 6194 2186 3987 3097 5768 6757 5754 5768 4361 4948 3864 2087 6746 3904 25 0 * * * * * * 7127 0 0 V 26 * 6625 * * 3870 * * 1555 * 1816 5049 * * * * * * 1975 * 6301 26 30 * 5601 * * * * 7127 0 0 Q 27 4677 7336 5546 2565 4290 5048 4846 4921 3451 4667 5356 7055 * 4976 4279 4885 2903 3653 6911 3134 27 58 6448 5176 3322 152 0 * 7099 1000 1724 V 28 5680 6438 * * * * * 2094 * 2308 * 4589 * * * * * 1025 * * 28 103 5186 4587 3287 156 * 0 7103 2287 2038 L 29 4495 6736 6425 6813 6494 4835 5810 2282 6998 1647 6779 * * 6223 6354 6085 3614 2939 * 3890 29 96 5976 4374 0 * 1861 464 7092 1000 3512 S 30 4438 * 3422 2424 * 4543 6651 * 3275 * 6965 3596 4494 3375 4706 2616 5777 4596 * 5296 30 222 6971 2891 1585 585 2326 321 7047 1000 4163 Q 31 5065 6596 4141 4232 6716 4823 5123 6914 1764 6346 * 6369 4381 3583 2424 4971 4314 5666 * 5078 31 205 6438 3048 3000 193 2969 197 6896 1000 5289 D 32 5246 6287 2057 2504 6728 3840 3788 * 5807 5378 5201 4045 6530 5194 6588 3307 3424 5629 * * 32 144 6513 3576 2000 415 3430 141 6868 1000 5493 C 33 4674 5155 2783 4537 5151 3165 4965 6384 5651 4255 * 3804 2830 * 5852 3241 3553 5163 5990 5361 33 148 6588 3518 3585 126 2946 201 6811 1000 5670 A 34 4499 5225 3752 4201 * 2671 5143 5182 3678 5163 6157 3772 3166 4207 4397 3021 4878 6407 * 6344 34 306 * 2389 * * 2101 383 6783 0 5811 V 35 4520 6021 2742 3329 5287 2782 5923 5377 6074 4785 5833 3290 4386 3593 4764 4242 3918 6504 * 6369 35 104 5967 4222 1585 585 2245 342 6740 1000 5950 S 36 4447 6539 3438 3505 6292 3180 * 5401 3948 4616 6508 3350 3749 4258 6620 3935 3362 5086 4989 4598 36 199 6424 3093 2585 263 1760 505 6861 1000 5722 G 37 5416 5951 3968 4589 5957 3726 * 4239 5136 3731 5947 3582 4120 4412 4177 3787 3601 3087 4525 5005 37 61 4604 * 2074 391 2154 367 6902 2197 5634 D 38 * 5850 1489 2457 5224 4756 6339 6009 4914 4912 * 2899 5593 6134 6385 4517 5547 4632 * * 38 48 5207 7493 2373 309 1280 766 6946 1697 5323 E 39 4219 6565 1929 2649 * 3351 6601 * 4850 * * 4313 3051 4810 4789 3995 4574 5427 * * 39 18 * 6355 * * 723 1343 7013 0 4397 G 40 5711 * 2453 3543 * 1088 4914 * 5441 4923 * 4485 * 5818 6317 4994 6151 6269 * 5672 40 21 6090 * 1014 987 195 2985 7085 1727 3513 W 41 * * * * 4957 * * * 6096 6726 * * * * 5856 * 6309 5755 211 4987 41 34 6027 6987 0 * 0 * 7125 1459 1000 W 42 5816 4577 * * 3380 * * 5433 6184 3000 3516 * * 5695 * * 4598 4634 1294 3536 42 17 * 6375 * * * 0 7121 0 1000 T 43 4668 6565 * 2896 3398 * * 6810 3020 2937 5833 5300 6460 4184 3690 6188 5086 4089 4678 2939 43 0 * * * * * 0 7095 0 1615 G 44 2474 3935 5177 * * 1063 * 5317 * 6153 5851 * * 6285 * * * 2642 6587 6883 44 56 5160 6658 0 * * 0 7095 2324 1615 Q 45 4781 4585 5315 2718 6485 * 5986 4981 3056 6435 6010 7010 6160 3498 2260 3521 3823 4753 * 5317 45 194 3515 4711 0 * 503 1766 7081 3639 2146 L 46 5902 5636 4868 4826 6686 6711 6049 3731 4924 2280 * 2204 5853 * 4856 4033 4386 2894 * 4922 46 310 3099 3708 510 1748 0 * 7093 4382 3032 P 47 3366 5953 3764 3846 * 3456 5849 5081 3372 3656 4994 7087 5070 4602 2599 3435 4686 7317 * 5839 47 38 5880 6779 0 * 188 3034 7087 1510 3754 S 48 5222 * 2292 4615 * 3890 6692 * 4622 * * 2163 6745 5610 3876 3427 2451 * 6240 * 48 130 5010 4185 1611 572 1026 974 7108 2377 1661 G 49 5216 * 3892 4927 6596 885 * * 4945 * 6694 3499 * 4592 3933 4325 4901 * * * 49 210 3110 5691 1365 709 225 2794 7072 4183 3582 R 50 4260 5044 7086 3301 * 6031 6986 5957 2699 5244 6226 4893 5048 2102 2192 6146 * 4447 * * 50 25 5864 * 1156 859 585 1585 7088 1478 2096 V 51 5575 5689 * 2998 5186 * 7013 4273 3182 5970 7061 5945 6850 3640 3165 3071 3011 2955 * 5300 51 53 4791 * 776 1265 0 * 7113 2628 1000 G 52 5705 * * * 6455 86 6206 * 6196 * * * * * * * * * * * 52 0 * * * * * * 7125 0 0 V 53 6738 6784 6477 * 3035 * 5336 3818 7048 2012 5004 6772 * 5964 4955 5647 * 4423 2457 2644 53 0 * * * * * * 7125 0 0 F 54 4305 6292 * * 1467 * * 2825 * 4682 * * * * * * * 1386 * 6366 54 0 * * * * * * 7125 0 0 P 55 5477 * * * * * * * * 6068 * * 55 * * * * * * * 55 0 * * * * * * 7124 0 0 S 56 1883 4287 * 4140 6666 3639 6412 5374 4000 4329 * 5545 * 6203 4342 2253 4036 5490 * 7530 56 0 * * * * * * 7108 0 0 N 57 4422 5672 4679 6851 * 6081 5752 6789 5072 * * 1320 * 5963 5567 2198 3028 4804 * * 57 0 * * * * * * 7084 0 0 Y 58 6769 4180 * * 2406 * 3862 6385 * 5530 5911 * * * 5759 6794 * 6594 6809 783 58 13 6764 * 1000 1000 * * 7083 1000 0 V 59 5384 * * * * * * 3292 * 2317 * * * * * * 3260 814 * * 59 0 * * * * * * 6902 0 0 A 60 3245 * 5939 1130 * 6193 * 6339 5372 * * * * 3289 4340 5179 2584 6382 * 6260 60 0 * * * * * * 6715 0 0 P 61 * * * * * * * * * * * * 0 * * * * * * * 61 0 * * 0 * * * 5611 0 0 //