HHsearch 1.5 NAME c2qsfX_ FAM FILE c2qsfX_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2qsfX_.a3m DATE Wed Jan 9 19:30:58 2013 LENG 104 match states, 104 columns in multiple alignment FILT 129 out of 141 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.3709 -2.4745 SEQ >ss_dssp CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHHHCTTHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHTTTCCHHHHHHHHHHTTTCHHHHHHH HTTC >sa_dssp DECDEEBCEDBCDADDDCDEBDEDBDEBADCCBDDBEDDDEEDDEDCDDCCEEDEEEDECECDEEADEBADDBCEDECEDEDABEBBBECEDDCECACED BEEE >ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHH HHCC >ss_conf 9778789999999999669999999994521188999999967999999951477655554888999999999976998999999999819859999998 7259 >Consensus xxxxxxqfxxlRxxixxnPxxLxxlLqxixxxnPqlxxxixxnxexFlxxlxxxxxxxxixltxeexxaIxrLxxlGFxxxxxixAxxacxxneexAanx Lfxn >c2qsfX_ IGLTVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHIMANPEVFVSMLLEAVGSFQVDYTPEDDQAISRLCELGFERDLVIQVYFACDKNEEAAANI LFSD >UniRef50_A2DSX0(200-305:310) UBA/TS-N domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2DSX0_TRIVA E=6e-06 s/c=0.49 id=25% cov=86% ---------EIKKHYEEHPEKIQELIDMLLLSDPAYYFLAKNNPMLLLTQLGFDVSKFDFSklgpksmyqelldkLTDEEKQVVKRLEEKGYDSMEVLQT FEACNKDEKLT------- >UniRef50_A9NVQ2(184-266:270) Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NVQ2_PICSI E=7e-05 s/c=0.58 id=27% cov=81% ------------------PTMLMGLSSTSSREN-VTREAVTSYDTEFEDEFAAATPLLRVTIDPSE-EAVSTLVAMGFDRNLAIEALAQADNDISAATNL LLE- >UniRef50_Q9VCD5(180-283:290) CG10694 n=1 Tax=Drosophila melanogaster RepID=Q9VCD5_DROME E=6e-19 s/c=0.92 id=32% cov=94% ------NITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMISggasrtpNEIEHLQITLTAEETAAVGRLEALGFERVMAVQAYLACDKD EQLAAEVLIR- >UniRef50_A2DSP6(159-249:250) UBA/TS-N domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2DSP6_TRIVA E=3e-14 s/c=0.87 id=25% cov=88% ------DHSKIEALLRQNNESVEAVVNAILDERSQTNVVTQTSQ------YSNAVQEQFNQFTQAEKDAIERLKSNGFSFSQCVEMFVACDKNEELALSL LLT- >UniRef50_A8PYP1(289-400:406) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PYP1_MALGO E=2e-20 s/c=0.88 id=30% cov=93% -------LSQLRTLLEQNPAALQPLVQALVQSNPQLAEAMSADPEGVLRMLAGEGLEGEdsfevpslQQLADEDRTQVEQIVAMGIPERKAIESYFMCGR NLEMAVQYYFE- >UniRef50_Q7PRQ2(225-339:348) AGAP000733-PA n=2 Tax=Culicidae RepID=Q7PRQ2_ANOGA E=1e-17 s/c=0.79 id=32% cov=91% -------FEDMRRILRDDPSMLPYLMRRMQASNPDLLNIIAEYQDEFLALINEGSNAGGQPagqpmsrelesiaaamvnsLTPSDMDAIERLKALGYPEH LVIQAYIACERDEYDAAMFL--- >UniRef50_Q8IDD9(108-201:202) Ubiquitin carrier protein n=11 Tax=Alveolata RepID=Q8IDD9_PLAF7 E=1e-13 s/c=0.83 id=22% cov=88% ----------IRTALLS----IQALLSDPQPDDPQDAEVAKMYKENYSLYLKTASvwtkTFATVPKLEPREDIIKKITEMGFSEDQAKKALIKANWNETL ALNTLLEN >UniRef50_A2FPD5(202-294:297) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FPD5_TRIVA E=3e-08 s/c=0.64 id=31% cov=81% --------------------LMQPLNQDIdMDGRPEVFEGIpAANFVGPLDMdMGVPPDQGQNmnlnrNLTPQQQEALRRICmQCGVDQFTALQVFEACD YNENMTTNCLMS- >UniRef50_Q4D7G6(238-358:361) UV excision repair RAD23-like protein, putative n=2 Tax=Trypanosoma cruzi RepID=Q4D7G6_TRYCR E=2e-17 s/c=0.74 id=30% cov=99% --MQIPQFGEIRSIVQANPESLPTVVQQLRIHHPEVIGLIQQDLEGFLRIMGNpgqtefttstggggdvPPDSVSIPLREEERVAIQRLVELGggaWTEE DAIEAYRACEESEEAAAHLLFSN # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * I 1 * * * * * * * 545 * 1668 * * * * * * * * * * 1 0 * * * * * * 1865 0 0 G 2 * * * * * 545 * * * * * 1668 * * * * * * * * 2 0 * * * * * * 1865 0 0 L 3 * * * * * * * * * 448 1906 * * * * * * * * * 3 0 * * * * * * 2303 0 0 T 4 * * * * * * * * * * * * * 2719 * 2071 713 * * * 4 0 * * * * * * 2802 0 0 V 5 * * * * 3500 * * 2344 3142 3389 2343 * * * * * * 1695 * * 5 0 * * * * * * 3045 0 0 E 6 * * 2166 2024 * * * * * * * * 1202 3375 * * * * * * 6 0 * * * * * * 3256 0 0 D 7 * * 2618 4905 * * * * * * * 3418 * 550 5198 * * * * * 7 0 * * * * * * 3828 0 0 L 8 * * * * 731 * 4486 3599 * 1888 * * * * * * * * * * 8 0 * * * * * * 4048 0 0 L 9 3623 * 4230 3748 * 5098 * 4103 * 4612 5958 3689 * 1646 5043 3216 3843 4573 * * 9 0 * * * * * * 4048 0 0 S 10 3291 * 4468 2382 * * 4149 * 4614 5445 6143 4775 * 1288 4853 5517 6143 6658 * * 10 0 * * * * * * 4241 0 0 L 11 * * * * * * * 1798 * 964 2416 * * * * * * 6326 * * 11 18 * 6329 * * * * 4743 0 0 R 12 6151 * * 5138 * 6687 * 6470 5179 6672 * * * * 153 * * * * * 12 0 * * * * * 0 4791 0 1000 Q 13 2987 * 3310 2965 * 6267 * * 5218 * * 5312 6154 2057 4704 3422 2366 * * * 13 0 * * * * * 0 4818 0 1000 V 14 2518 * * 7279 * * 5218 3568 5573 1576 3031 * * 4242 5791 * * 2661 * * 14 23 * 5957 * * 0 * 4818 0 1000 V 15 4479 6465 * * 4256 * * 2184 * 1866 5359 * * * * * * 1859 * 3367 15 0 * * * * 0 * 4806 0 1000 S 16 5647 * 5749 4336 5367 * 5467 6166 * 2201 * 4504 * 1369 2902 4606 5577 * * 7206 16 0 * * * * * * 4821 0 0 G 17 2979 * 5211 3226 * 4080 * * 6535 * * 4606 * 1551 6755 1977 5404 * * * 17 187 * 3043 * * * * 4821 0 0 N 18 * * 3013 4903 * * 3761 * * * * 518 * 4201 5953 * * * * * 18 0 * * * * * 0 4472 0 2251 P 19 5375 * * * * * * * * * * 5031 116 * * * 5486 * * * 19 10 * 7183 * * * 0 4568 0 2251 E 20 2876 * 3860 1597 * * 4274 * * * * 5843 * 2220 5664 3394 3922 * * * 20 54 * 4779 * * * 0 4564 0 2245 A 21 2505 * * * * * 5609 3398 4125 1697 2546 * * 6114 4312 4185 4567 6715 * * 21 0 * * * * 912 1093 4576 0 2684 L 22 6550 * * * 5038 * * 1843 * 786 4891 * * * * * * 3914 * * 22 16 6534 * 2000 415 1422 674 4926 1000 1718 A 23 4965 * * 2900 * * 5836 * * 5236 4199 4881 1906 1473 5411 4557 * 6867 * * 23 0 * * * * 0 * 4931 0 1266 P 24 1944 * 6229 3159 * 4203 * 6046 * 5755 * * 1926 2864 4869 5463 4795 5730 * 6101 24 0 * * * * * * 4962 0 0 L 25 * * * * 4026 * * 3015 * 968 3828 * * * * * * 2331 * 4861 25 34 * 5423 * * * * 4962 0 0 L 26 5037 * * * 4859 * * 3559 * 649 3515 5390 * * * 5358 * 3705 * * 26 0 * * * * * 0 4911 0 1000 E 27 4410 5603 5181 3099 * 4523 5963 * 6011 4875 * 4175 5246 1262 5036 3304 4677 6728 * * 27 0 * * * * * 0 4908 0 1000 N 28 3323 * 3310 3307 * * 4556 * * 6980 3577 5386 * 1393 4279 3584 5363 * * * 28 0 * * * * 0 * 4908 0 1000 I 29 * * * * * * * 1351 * 1323 5191 * 3172 * * 5367 * 4453 * * 29 34 5427 * 0 * * * 4959 1000 0 S 30 2121 * * 3288 * 2002 * * 4778 3425 5427 * * 3124 5295 3204 * 5914 * * 30 0 * * * * * * 4959 0 0 A 31 2710 * 3971 3497 * 6284 * 4644 3896 4499 6586 5677 3172 2236 2880 5761 5433 * * * 31 0 * * * * * * 4959 0 0 R 32 * * 3115 3263 * 4190 4644 5809 * * * 3652 * 2910 3951 2168 2972 4624 * * 32 0 * * * * * * 4959 0 0 Y 33 * 5426 2186 * 5059 * 3821 6347 * 5809 * 1056 * 6158 4361 4339 * * * 4915 33 54 6347 5367 2000 415 * * 4959 1000 0 P 34 6356 * * * * * * * * * * * 56 * * 5278 * * * * 34 0 * * * * 0 * 4895 0 1000 Q 35 2814 * 3342 2333 * * 5596 * * * * 6930 6246 1319 5034 4394 * 4651 * * 35 34 5443 * 1585 585 * * 4959 1000 0 L 36 5230 * 3507 * 4698 * * 4532 * 1060 6586 * * 5809 5699 * 4047 2392 * 5299 36 0 * * * * * * 4959 0 0 R 37 1732 * * * 3061 4386 5457 5901 * 2046 5611 5298 * * 4123 * * 4470 * 3303 37 0 * * * * * * 4959 0 0 E 38 4025 * * 1621 5299 5901 6148 * * * * 6103 6050 1695 3379 4257 * 3827 * * 38 0 * * * * * * 4959 0 0 H 39 3244 * * 6264 5795 4792 6280 4009 5426 1392 5275 * * 3190 * * 5004 2662 * 5416 39 0 * * * * * * 4959 0 0 I 40 2802 * * * 5125 * * 801 * 4785 4166 * * * * * 4649 4140 * 3932 40 34 5427 * 0 * * * 4959 1000 0 M 41 3488 * * 5211 * 5756 7287 6572 3412 5171 4677 3164 * 1938 3168 2914 3943 7348 * * 41 0 * * * * * * 4959 0 0 A 42 3007 * 5237 2772 * 7104 5292 * 6004 5598 5489 3116 * 1574 4643 3400 5298 * * * 42 30 5621 * 1585 585 * * 4959 1000 0 N 43 6115 * 2561 * * * 3678 * 5809 * * 808 * * 5853 5298 * * * 3232 43 0 * * * * * * 4959 0 0 P 44 * * 5474 5901 5436 * 4979 * 3319 5898 * 7420 1416 1627 5082 5644 * * * 4828 44 71 5365 5382 1585 585 * * 5056 1000 0 E 45 3675 * 3136 1177 * 4603 * * * * 5357 5255 * 2696 5443 5252 4435 5365 * * 45 35 5386 * 1585 585 * 0 5001 1000 1000 V 46 2169 * 4810 1672 * 3115 7658 * * 3737 4435 4529 * 3745 5639 6019 7322 5215 * * 46 0 * * * * * 0 5001 0 1000 F 47 * * * * 392 * * * * 3194 * * 5365 * 5969 * * 4532 * 4466 47 25 6870 6843 3170 170 * 0 5001 1000 1000 V 48 4612 5966 6866 5452 * * * 2432 * 1142 3871 4442 * * * 5461 * 3226 * 5088 48 14 6690 * 3585 126 * 0 5000 1000 1624 S 49 3537 * 2978 3096 * 5379 6170 6745 5599 5461 * 3820 * 2662 2272 3366 5009 6014 * * 49 0 * * * * * 0 5000 0 1624 M 50 4102 * 5060 4993 4501 5909 * 3707 * 1673 2084 * * 5337 5806 5049 3702 * * 4512 50 36 5351 * 0 * 1032 968 5000 1000 1624 L 51 3889 * * 6702 4218 6880 * 2463 * 1106 3023 * * * * 6105 * 4883 * 4524 51 158 3268 * 4544 63 0 * 5055 3261 1000 L 52 3540 * * 5931 6707 2464 * * 3346 3301 4520 1705 * 4559 5365 3895 5458 * * * 52 189 3133 6838 4379 71 * * 5056 3000 0 E 53 4371 * 4818 1558 5383 2929 5356 * * 4465 * 3110 * 4365 * 4052 3680 4355 * * 53 135 3490 * 3975 95 0 * 5056 2528 1000 A 54 1945 * 4298 3269 6763 3384 6661 * * * * 3798 2082 4563 * 6971 4457 * 3898 * 54 117 4128 5606 4221 80 * * 5056 2654 0 V 55 3161 * 4258 4689 6970 3421 6446 4998 * 4631 7101 5179 1909 5115 * 3906 3645 2939 * 7459 55 163 3227 * 4099 87 0 * 4951 3237 1000 G 56 5927 * 3640 4310 * 2044 * 5841 4716 4741 5770 3616 2721 3009 5238 4287 4375 5982 * * 56 73 4349 * 4399 70 * * 4993 2150 0 S 57 3413 * 4622 2905 4947 3575 5278 4455 4623 5391 4750 4451 3243 3815 5752 3002 4900 5022 * 6308 57 92 4018 * 4863 50 * * 4993 2321 0 F 58 4148 * 5982 4917 2954 3112 4274 5143 * 3904 4589 4240 4472 3011 6040 7623 4389 4651 5574 3174 58 30 5616 * 4123 85 * * 4993 1814 0 Q 59 2683 * 3274 3529 5053 4414 * 5371 * 5429 * 5576 * 2414 3823 5851 2847 4054 * 4867 59 144 3397 * 3888 101 * * 4993 2721 0 V 60 4604 * * * 5061 7457 * 1493 5513 3818 * 3355 * 3491 5334 5578 3796 2549 * * 60 115 3969 6324 1914 445 * * 5050 2294 0 D 61 5232 * 3670 3357 6630 5380 4543 * 5628 * 5216 4227 2164 2219 4953 3460 4094 * * * 61 176 3125 * 4413 69 * 0 5168 3196 1000 Y 62 5539 5389 * * 3627 * * 3125 5544 1307 5717 5641 * * * 6533 4777 2311 * 4454 62 65 4509 * 4584 61 0 * 5178 2233 1000 T 63 3506 * 4132 5961 * 5168 * * 5692 5622 7481 5202 4821 * 6083 2082 1145 * * * 63 9 7336 * 1585 585 * * 5041 1000 0 P 64 3084 * 4442 2155 * * 7376 * 5443 * * * 1516 2905 * 4145 4549 * * * 64 13 6821 * 2807 222 * * 4585 1000 0 E 65 4881 * 3680 935 * * 5314 * * 7171 * 5209 4736 3118 * 3525 * 3913 * * 65 0 * * * * * * 4620 0 0 D 66 6036 5544 1927 954 6487 * * * 5819 * * 4732 * 4901 4467 6046 7061 * * 5938 66 28 * 5687 * * * * 4558 0 0 D 67 4319 * 4145 2105 5647 * * 5136 2971 6620 4274 4704 * 3165 2541 4317 5524 5602 * 6803 67 56 7187 4990 1585 585 0 * 4572 1000 1529 Q 68 2070 * 2820 1655 * * * * 3451 * 6168 5921 * 3293 6215 6083 5149 5477 * * 68 11 7022 * 4170 82 * 0 4544 1000 1570 A 69 910 * 5073 * * * * 6113 2813 4890 5869 4804 * 4192 * 3600 5405 4875 * * 69 0 * * * * 0 * 4552 0 1570 I 70 5324 * * * * * * 907 * 3559 * * * * * * 5957 1552 * * 70 15 * 6580 * * * * 4636 0 0 S 71 4085 * 3372 1933 * 5589 4832 * 2976 7370 * 3622 * 2399 4207 4134 6430 * * * 71 0 * * * * * 0 4624 0 1000 R 72 * * 5645 3203 * * * * 3038 * 6473 5213 * 2763 989 5579 4664 * * * 72 0 * * * * 0 * 4626 0 1000 L 73 * * * * 4793 * * 2685 * 357 * * * * * * * 5178 * * 73 0 * * * * * * 4637 0 0 C 74 4507 2957 5644 3109 6106 * * 4419 3486 3999 3264 * * 5043 6252 6265 4468 1976 * 5770 74 28 5687 * 0 * * * 4637 1000 0 E 75 2098 * 3705 1704 * 3516 * * 6646 5616 4925 5267 * 3508 6097 3735 5644 6885 * * 75 0 * * * * * * 4637 0 0 L 76 * 5687 * * * * * 4655 4735 994 1402 5438 * * * * * * * * 76 72 4877 6106 724 1341 * * 4637 1466 0 G 77 * * * * * 40 * * * * * 5178 * * * * * * * * 77 66 4489 * 1585 585 0 * 4621 1859 1000 F 78 5312 * * * 335 * * 3798 * * 6819 * * * * * 7176 5687 4493 5033 78 0 * * * * * * 4637 0 0 E 79 5915 * 1627 3348 * 4602 * * * 6299 * 5391 2367 5936 * 2602 3199 * * * 79 0 * * * * * * 4637 0 0 R 80 5915 * 5298 1894 5940 * 5955 6987 2903 7357 * 6106 4265 5687 1462 5701 6646 7316 * 5357 80 0 * * * * * * 4637 0 0 D 81 3153 * 2630 2608 5687 5527 3416 6530 6437 * 5701 3303 7744 3398 4785 3632 4242 6499 * 8014 81 0 * * * * * * 4637 0 0 L 82 5225 * 2905 2932 * * * 4765 4095 2620 4640 6278 * 2672 5717 3849 3601 3835 * * 82 21 6106 * 1585 585 * * 4637 1000 0 V 83 1199 3266 * * * * * 5815 * * * * * * * 5021 5644 1351 * * 83 0 * * * * * * 4637 0 0 I 84 5525 6197 * * * * * 1400 4754 2639 * * * 6530 3186 5966 4227 2336 * * 84 0 * * * * * * 4637 0 0 Q 85 5534 * 3999 1765 * * 5814 * 3554 6264 * 6048 7532 1570 4418 5459 5815 4036 * * 85 0 * * * * * * 4637 0 0 V 86 497 6184 * * * 5170 5770 4759 * * 6491 * * * * 5977 5701 2754 * * 86 0 * * * * * * 4637 0 0 Y 87 * * * * 2487 * * 6169 * 1321 * * * * * * * * * 1296 87 0 * * * * * * 4635 0 0 F 88 5456 * * 2689 2409 * * 2600 5204 3074 6238 5560 * 3892 3327 4377 5647 4738 * 5967 88 0 * * * * * * 4635 0 0 A 89 877 * * 6190 * * * 5819 3265 4785 3949 6434 * 4552 3879 4913 5480 4597 * * 89 0 * * * * * * 4635 0 0 C 90 3998 706 * 4990 6017 * 4504 * 4723 6806 * 5019 * * * 4174 3452 6812 * * 90 0 * * * * * * 4635 0 0 D 91 * * 1452 3319 * 2639 * * 4113 * * 2097 * 4734 * 4490 * * * * 91 0 * * * * * * 4635 0 0 K 92 * * 5356 6489 6387 2867 * * 1258 * * 3723 * * 3005 * * * 2871 4051 92 0 * * * * * * 4635 0 0 N 93 * * 1814 * * * * * 6439 * * 648 * * 4745 5129 * * * * 93 0 * * * * * * 4635 0 0 E 94 5353 * * 823 * * * 4426 4991 2523 * * * 5343 * * 6864 2998 * * 94 4 * 8370 * * * * 4602 0 0 E 95 4477 * 4533 759 * 6167 * * 5528 * * 2510 * 3965 * 6668 5332 * * 6467 95 0 * * * * * 0 4515 0 1000 A 96 2402 * 5462 * 6324 * 7228 7213 6238 1868 2321 6420 * 3987 3787 6837 5107 3477 * * 96 0 * * * * 0 * 4515 0 1000 A 97 159 * * * * * * * * * * * * * * * 3263 * * * 97 0 * * * * * * 4602 0 0 A 98 893 * * * * 6295 * 3706 * 3425 * * * * 5568 * 2653 3338 * * 98 0 * * * * * * 4439 0 0 N 99 4060 * 4117 3810 * 5396 4949 * * * 6185 660 * 4988 * 3971 6264 * * * 99 32 5522 * 0 * * * 4439 1000 0 I 100 * 3742 5144 6597 2077 6173 5430 4586 * 2622 5782 * * * 7050 * 6338 4495 3588 2042 100 0 * * * * * * 4444 0 0 L 101 * 6203 * * * * * 3781 * 181 * * * * * * * * * 4985 101 0 * * * * * * 4444 0 0 F 102 6624 * * * 865 * * 5405 * 1364 5112 * * * * * * * * * 102 0 * * * * * * 4378 0 0 S 103 5736 * 3123 1399 5081 * 7212 * * * * 4111 * * 4215 1721 4793 * * * 103 0 * * * * * * 4180 0 0 D 104 * * 3148 3760 * * * * * * * 298 * * * * * * * * 104 0 * * 0 * * * 3679 0 0 //