HHsearch 1.5 NAME c2of5K_ FAM FILE c2of5K_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2of5K_.a3m DATE Wed Mar 10 20:05:02 2010 LENG 100 match states, 100 columns in multiple alignment FILT 110 out of 498 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.6 EVD 0.3715 -2.8188 SEQ >ss_dssp CCCEETTTEECCHHHHHHHHHHCCTTHHHHHHHTTCCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHTTCHHHHHHHHHHHTTC >sa_dssp CEBCCEEDCDADEECADDAAECBCECBBDAADDBEBDEECADCADEECEEDDDCBACCAACCBBEDCCEEEDBBDDABDBACDBECDDAAEDBDEDBEEE >ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >ss_conf 9988868786498999999999719999999983989999999998559807999999999999705884100899999999759835899999996149 >Consensus xnxxdxxxxxltxxxlxxiaxxlgxdWxxlaxxLglxxxxIxxIxxxxxxxxxxxxxxmLxxWxxxxxgxxatxxxLxxaLxxxxxxdladxiexxlxxx >c2of5K_ MNLGDAETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGLLVQALEQSDRQDVAEEVRAVLELG >UniRef50_UPI000180B824(1-79:80) PREDICTED: hypothetical protein n=1 Tax=Ciona intestinalis RepID=UPI000180B824 E=0.0003 s/c=0.59 id=20% cov=54% ----------------------------------------IEHVRYNNeKYGLEEIVYQLIQRWVRGKGGQV-LVQNMAQVLVDAGYQHIAQLLE----- - >UniRef50_B3SAX7(831-913:917) Predicted protein n=1 Tax=Trichoplax adhaerens RepID=B3SAX7_TRIAD E=0.0005 s/c=0.55 id=20% cov=40% -----------------------GKKLKEFGWRLGLSSIDVGDIVDSNEERF-AKCMKLLEAW------------------------------------- >UniRef50_C3Z8Q7(6185-6273:25209) Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3Z8Q7_BRAFL E=6e-14 s/c=0.88 id=18% cov=87% ---------VLCDSQIDIYSNKLSDDWKNFCTYLGCDDDFISKIEQQCDHDNYQCISTAIKHWRDTvDCSYVEKIDLFCHACDSCGHHDIAVDCRD---- - >UniRef50_B3RMN0(648-729:753) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RMN0_TRIAD E=5e-05 s/c=0.60 id=18% cov=79% ------------------IASSIGKEWQRLAKELGLPDDEIKslQQQGRNKGGYSTLAVDMLKYWQKRNLASND-LTMLIAGLDHLGQNSLIDSLKKIL- -- >UniRef50_UPI0000E48905(1043-1140:1493) PREDICTED: similar to ankyrin 2,3/unc44, partial n=3 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48905 E=0.0002 s/c=0.48 id=20% cov=75% -------------------------DFYDLGVALGFHIQQLDAIEYKRLKDRQAAICDMLRTWKHRQLPHQNLNEVLITLLKSAETEAEKTKITDLLTL- >UniRef50_UPI0000E4933C(33-125:1015) PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4933C E=9e-08 s/c=0.63 id=20% cov=92% -NPGPLEQAPISHLELNALAEKVPHgYYMKLGLHLGVDEVKLDNLLRDEQR-TEKATYAVLCCWWNDTK-ECETRKRLMEALSKCGLKDLADKVE----- - >UniRef50_UPI000192583B(193-280:280) PREDICTED: hypothetical protein n=1 Tax=Hydra magnipapillata RepID=UPI000192583B E=2e-07 s/c=0.64 id=20% cov=85% ----------LTPSQMDLIASKISNNWNDFGRVLNLNENELDHIDID-FTKVHEKAYNVLRQCKQKSKEGYLTWENLKKELELLNRFDIVEELQE----- >UniRef50_Q5TS00(187-267:282) AGAP004959-PA n=4 Tax=Culicidae RepID=Q5TS00_ANOGA E=1e-06 s/c=0.67 id=21% cov=72% ---------------LDTVSRHLGYEWKSFARRLEYSEGQIDAFEADNSTlaEVSRQIYSFMLDW--TRNDDDPTLGRLVTLLWNNKHKE---------- -- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 561 1634 * * * * * * * * * 1 0 * * * * * * 2313 0 0 N 2 * * * * 2888 * * * * * * 209 * * * * * * * * 2 0 * * * * * * 4069 0 0 L 3 * * * * 3280 * * 3354 * 1743 * * 1756 3409 * * 3181 * * * 3 0 * * * * * * 4645 0 0 G 4 * * * 3409 * 974 * * 3283 * * * * * 3280 * 2388 * * * 4 0 * * * * * * 4645 0 0 D 5 * * 557 * * * 3655 * * * * 3643 3667 * * 3606 * * * * 5 0 * * * * * * 5263 0 0 A 6 2104 * 3015 3964 * * * * * 3968 * 4214 1815 * * * 4223 * * 3014 6 0 * * * * * * 5692 0 0 E 7 3350 * 3326 2360 * 3605 4295 4157 3154 * * 3329 2705 * * 4237 * * * * 7 0 * * * * * * 5808 0 0 T 8 * * * 3390 * 4378 4808 * * 4399 * * 4556 3348 4416 1825 2208 4506 * 4535 8 0 * * * * * * 5962 0 0 G 9 3315 * * 4758 4584 1349 * * 4539 4393 * 4794 4766 * 3109 3760 3732 * * * 9 45 * 5013 * * * * 6199 0 0 F 10 4268 * 5003 * 3867 * * 3962 * 4998 4711 * 2429 4775 * 3747 4791 2081 * 2780 10 98 3925 * 0 * 0 * 6396 1645 1000 L 11 * * * * 3027 * * 3390 * 861 5339 * 4343 * * * * 2669 * * 11 0 * * * * * * 7053 0 0 T 12 * 4027 * 5629 * 5362 * 4267 * 5363 * 5554 * * 3730 1804 1201 * * * 12 0 * * * * * * 7154 0 0 Q 13 5427 * 1526 2247 * 4674 4707 5083 5737 5787 * 4541 3680 3397 4079 * * * * * 13 23 * 5989 * * * * 7329 0 0 S 14 3663 * 3359 3087 4973 * * 4050 3327 3697 * 5596 5408 3719 5609 2259 4251 5916 5779 * 14 0 * * * * * 0 7329 0 1000 N 15 5311 * 2358 2735 4946 * 4002 4556 * 5682 5676 3932 * 2497 3467 * 4394 4601 * 5002 15 0 * * * * * 0 7423 0 1000 L 16 5867 5757 * * 2846 * * 2757 * 769 4152 * * 5773 * * * 5981 * * 16 30 5593 * 0 * * 0 7410 1000 1000 L 17 3545 * 3472 4747 4945 6032 * 5641 5728 1909 4544 4028 5744 4334 4214 5193 4163 5750 4601 3946 17 84 4502 6331 1628 564 * 0 7519 1723 1000 S 18 3599 * 3326 4941 * * 5881 4708 3048 2874 * 3483 5940 3892 3566 3255 3635 6171 5956 * 18 0 * * * * 0 * 7540 0 1544 V 19 * * * * 4216 * * 1639 * 1707 * * * * * * * 1728 * 5892 19 19 6279 * 3322 152 * * 7765 1000 0 A 20 838 4482 * * * 4797 * * 5228 * 6057 * * * * 2240 5213 4127 * 5492 20 23 6000 * 0 * * * 7765 1000 0 G 21 3797 5290 3494 2698 * 5181 * 5934 2286 6057 * 4018 5905 6108 3079 3077 4559 * * 5410 21 0 * * * * * * 7765 0 0 R 22 5438 5872 5492 3245 * 6462 2791 5613 2447 3983 * 3415 * 4133 3035 3913 4472 6569 * 6108 22 21 6083 * 1000 1000 * * 7765 1000 0 L 23 6410 * * * 6636 * * 1779 * 1118 4089 * * * * * * 2685 * 6408 23 86 4108 * 0 * * * 7769 3042 0 G 24 6387 5952 4311 6091 * 835 6615 * 4580 * * 5484 4120 6288 4582 3449 4615 6127 6224 * 24 35 6203 6632 0 * * * 7751 1000 0 L 25 5603 * 3440 4368 5785 5943 4849 * 2849 4992 * 3382 4316 5118 3093 2941 3375 4070 * 5554 25 36 5345 * 546 1665 0 * 7741 1645 1000 D 26 6711 * 1275 2696 6536 4551 5146 * 3745 * 6599 4364 4664 4868 5272 4032 * * * 4408 26 73 4333 * 866 1148 * * 7792 2946 0 W 27 * * * * 3821 * 6765 5622 * 6848 6211 * * * * * * * 257 4619 27 13 6765 * 0 * * * 8141 1000 0 P 28 * 6765 4244 4008 5170 * 7057 4933 1659 6712 4742 4832 4844 4435 2666 4552 4333 4748 6643 5003 28 0 * * * * * * 8141 0 0 A 29 4952 * 3278 3633 * 5578 6323 4783 2343 5202 4968 4340 7312 3490 2658 5136 3321 6518 6003 * 29 0 * * * * * * 8141 0 0 V 30 * * * * 3024 * * 3922 * 827 6120 * * * * * 6251 2369 * 5257 30 0 * * * * * * 8079 0 0 A 31 1178 5487 * * * 1271 * 6373 * 5574 4839 * * * * 6809 * 5038 * 6178 31 15 6622 * 0 * * * 8079 1000 0 L 32 6013 * 6763 4400 * 4982 4818 3310 4036 3107 * 5611 5233 4038 1911 5795 3678 3579 5825 6416 32 27 5754 * 0 * * * 8079 1558 0 H 33 3138 5310 5831 3000 5699 4881 3496 6203 2652 3865 * 4565 * 4227 3590 4607 4992 5167 6937 4372 33 31 5562 * 0 * * * 8088 1632 0 L 34 6298 * * * 5692 * * 4615 * 215 4717 * * * * 6208 * * 6141 * 34 19 * 6266 * * * * 8104 0 0 G 35 * * 3292 5277 * 764 4981 * 3564 6903 * 3621 5855 4935 6952 5695 * * * * 35 42 5710 6741 2048 399 0 * 8081 1735 1000 V 36 6446 4826 * * 2054 * * 2682 * 1469 4750 * 5003 * * * * 3199 * 5788 36 0 * * * * 0 * 8102 0 1000 S 37 6848 * 3910 4204 * 4718 6602 * 3540 * 6401 3385 2724 * 5948 2001 2241 * * * 37 0 * * * * * * 8104 0 0 Y 38 5472 * 2884 2116 5739 4320 5015 3798 5280 5759 * 3394 5628 3526 3712 5402 4900 * 6743 4307 38 33 * 5477 * * * * 8104 0 0 R 39 2551 6282 3144 3975 * 4100 5583 5596 5562 5405 * 3255 5012 4066 4016 3008 4123 5138 * 5174 39 0 * * * * 0 * 8070 0 1540 E 40 4813 * 2364 1828 5013 * 5491 * 3938 6542 6105 5669 * 2613 5019 6249 4327 4532 * 5350 40 12 * 6872 * * * * 8104 0 0 V 41 6692 * * * 6450 * * 1140 * 1586 5394 * * 6138 6290 6934 6537 3032 * * 41 0 * * * * 0 * 8109 0 1000 Q 42 6467 * 1756 2182 6684 5183 6710 7041 3814 5113 * 4248 * 3396 4705 4239 4620 6083 6742 6139 42 14 6694 * 1000 1000 * * 8112 1000 0 R 43 3235 * 4258 3613 6144 5126 4431 6776 3399 6209 5855 3395 * 3423 2881 3425 4142 4159 * 7334 43 31 6560 6589 1585 585 * * 8112 1000 0 I 44 4509 4639 * * 3646 * 6230 726 * 3489 6483 * * 6607 * 6314 7070 4009 6478 6143 44 57 5879 5519 469 1849 0 * 8104 1630 1000 R 45 4397 * 3433 2193 * * * 5783 2800 4047 5827 5916 * 3187 2848 4104 4453 5689 * 6281 45 0 * * * * 961 1040 8106 0 1718 H 46 3308 5504 4495 3312 5290 5082 3539 5428 3618 3658 5324 4077 * 4239 4387 3581 5265 4736 * 3738 46 11 * 7095 * * 0 * 8119 0 1000 E 47 4676 * 2120 2881 * 5334 7109 * 2779 4515 6420 3652 * 3146 3594 3988 5407 * * * 47 120 5222 4243 1000 1000 0 * 8123 1716 1000 F 48 5716 4451 5571 3714 5578 * 2526 * 5696 6399 6366 2243 6079 5144 4734 6952 4572 5301 5203 2281 48 129 4509 4579 353 2204 281 2499 8087 2822 3235 R 49 6046 * 4658 5077 4808 4564 3879 5316 2865 4625 6714 5230 2144 4484 2975 3554 6500 * 6665 5239 49 90 5949 4500 751 1301 0 * 8139 1646 3509 D 50 * * 2451 3360 * 3363 3536 * 4604 4076 6423 2813 4503 3977 3326 6949 4404 * * 5692 50 99 5208 4678 2646 251 0 * 8067 2381 2833 D 51 4238 5389 2130 5629 * 3784 5260 6249 4072 * * 2234 5122 5735 5217 3049 4406 5093 * 5723 51 102 5855 4287 508 1752 0 * 8090 1644 2895 L 52 4257 5480 5617 5366 4577 * 6481 3342 5048 2949 4671 5581 3367 7016 3798 3706 3335 3214 * 4348 52 44 6436 5782 0 * 0 * 8117 1000 3762 D 53 5814 5644 4143 3045 5079 4596 3682 5628 3169 5269 6852 4067 7062 3356 3756 3729 4167 6234 5712 3890 53 14 * 6713 * * 0 * 8138 0 1704 E 54 3952 * 2998 1612 * 5344 6693 * 5069 6873 4922 5291 6073 3129 2962 4619 6692 4925 6485 * 54 0 * * * * 0 * 8109 0 1000 Q 55 2274 4042 6896 * * 5751 5142 4492 3185 5624 6708 * * 1582 3165 6699 * 5392 * 6159 55 24 * 5942 * * * * 8153 0 0 I 56 2364 2566 * * 6486 6330 5723 2620 4251 4232 * 5708 5713 * 5714 4686 3960 2839 6081 6503 56 21 * 6081 * * 0 * 8110 0 1682 R 57 5511 6615 * 6603 3004 6286 4095 5810 4366 2929 4233 * * 4015 3328 3738 5903 4027 * 2349 57 12 6871 * 1585 585 * 0 8076 1000 1000 H 58 2876 * 3361 2707 6872 6452 4347 6497 3926 5598 6318 4999 * 2885 4462 3035 4234 4722 * 6776 58 0 * * * * 0 * 8076 0 1000 M 59 3135 4637 * * 6587 5590 * 4335 * 2268 1451 * * * * 4821 6077 3000 5902 * 59 0 * * * * * * 8153 0 0 L 60 * * 5492 * 4042 * * 3982 * 320 5248 * * * * * 6055 6482 * * 60 0 * * * * * * 8153 0 0 F 61 5884 4600 * 3446 7181 6701 4252 5938 2901 2647 6717 4405 * 3556 2799 6570 4859 3759 6104 4252 61 11 * 7085 * * * * 8153 0 0 S 62 3475 5929 3875 3864 6575 6493 4759 5441 3383 3255 5260 * * 3948 3107 3692 3102 6185 4733 5468 62 41 * 5172 * * * 0 8120 0 1000 W 63 6269 5449 * * 6680 * * 5424 * * 5976 * * * * * * * 167 5356 63 187 5419 3349 684 1404 1100 907 8096 1751 2198 A 64 4699 7277 * 4640 6025 5918 6798 4163 2244 4201 5760 6568 * 4049 1702 5248 * 3439 6552 5228 64 132 5365 3984 0 * 579 1596 8010 1748 4702 E 65 6414 * 2688 2242 * 6543 4902 * 2770 4609 6004 4877 * 2204 4013 * 6437 5974 * 4885 65 87 6479 4395 0 * 586 1582 8083 1000 4582 R 66 4472 6423 4361 * * 4107 6599 4401 3031 6164 4455 4456 * 3999 1891 3713 3054 6647 * 6317 66 135 4784 4231 260 2598 407 2024 8009 2224 4060 Q 67 6687 6200 3670 2897 * 5761 3985 5224 4186 4029 5027 2911 5533 2776 4267 3852 3886 6774 * 6619 67 215 6293 2992 2000 415 408 2023 8086 1000 3999 A 68 4689 4776 5352 4200 5816 2940 3843 5256 3157 3872 6316 4552 3375 6582 4228 3166 4323 6542 6604 5396 68 100 5682 4401 446 1910 0 * 8116 1625 4974 G 69 4220 * 3432 5503 5402 1253 6311 * 5714 * 6096 3412 3902 6801 4613 3450 5910 * * 5422 69 51 * 4834 * * 0 * 8111 0 2770 Q 70 5266 6770 2661 4113 * 3946 4888 * 2550 5310 5365 5009 4202 3976 4211 3293 4584 4762 6032 5004 70 82 5491 4930 470 1847 0 * 8099 1638 2508 P 71 4491 6680 3349 3147 * 3487 5221 6448 3435 5371 6569 3418 4320 4296 4258 3589 3374 5125 * 5314 71 48 6799 5381 2585 263 938 1065 8168 1000 2686 G 72 1107 * 3187 3763 6063 4406 4246 * 5619 4482 * 4058 4396 * * 5034 5404 6557 * * 72 72 * 4360 * * 310 2372 8083 0 3068 A 73 4596 6613 5339 * 5184 5474 * 6624 2931 4424 5719 4905 6126 6752 5907 2764 1244 6184 * 6635 73 32 * 5512 * * 265 2574 8046 0 3642 V 74 5813 6757 6675 5468 4529 6122 * 2755 3797 1913 5488 6540 5325 * 3579 * 4559 2468 6345 5625 74 25 6922 6780 0 * 558 1640 8066 1000 2190 G 75 4704 * 2684 1926 * 3132 7147 * 3577 4998 * 4797 4713 3459 4629 4085 4954 6663 * * 75 45 7039 5418 1000 1000 0 * 8079 1000 1686 L 76 3923 6912 4300 3876 * 5753 5806 4986 3222 3753 4640 3711 6421 2733 3581 5294 3442 3966 * 6164 76 0 * * * * 964 1037 8056 0 1753 L 77 6346 * * * 4951 * * 5085 * 203 5851 * * * * * * 5326 6041 * 77 0 * * * * * 0 8079 0 1000 V 78 3295 3816 6643 3882 * 5963 6549 2012 3271 3668 4342 * * 5241 * 4637 4567 3215 * 5237 78 0 * * * * 0 * 8155 0 1000 Q 79 3843 6404 4124 2431 * 5320 5647 * 2862 6043 * 4280 * 3449 3502 3618 2881 6074 * 6086 79 17 6404 * 2322 322 * * 8169 1000 0 A 80 827 5618 * 6295 * 3808 7095 4678 4747 4985 6086 6526 * * 7286 4167 4044 3874 * * 80 0 * * * * * * 8169 0 0 L 81 * 4985 * * 6760 * * 6043 * 203 4229 * * * * * * 5512 * * 81 0 * * * * * * 8169 0 0 E 82 6686 * 4280 3241 * 4919 4951 5714 2553 5549 5366 5175 * 3563 2033 4968 4957 3809 5301 6051 82 0 * * * * * * 8152 0 0 Q 83 4035 * 3170 2769 * 5343 5789 * 2223 6239 * 3661 * 3732 3408 3047 4957 * * 6753 83 0 * * * * * * 8152 0 0 S 84 2972 3088 * 6714 6148 4910 6097 2268 7068 3436 3299 5548 6627 * 6866 3109 3938 4235 * * 84 0 * * * * * * 8176 0 0 D 85 * 5713 2315 3210 * 1351 6578 * 3762 * * 4085 5986 5686 3843 6979 6575 * * 6223 85 18 * 6300 * * * * 8062 0 0 R 86 * 5511 * 5607 4489 * 3729 5727 4039 2353 3452 4986 * 4492 1649 6443 6154 5530 * 5117 86 0 * * * * * 0 7985 0 1000 Q 87 5202 * 4826 4274 6244 3155 3573 6615 2741 5662 5067 2662 5587 3560 4002 4627 4679 4023 * * 87 14 * 6710 * * 0 * 7985 0 1000 D 88 4007 6372 1029 3739 * 5660 6770 * 4061 4574 * 6444 6595 4980 5059 3559 6670 6195 6625 5157 88 0 * * * * * 0 8014 0 1000 V 89 3673 4967 * 5997 * * * 2330 5030 1441 5284 * * * * * 4317 2319 * * 89 14 6697 * 1585 585 0 * 8173 1000 1000 A 90 787 6254 * 5908 * * * 3942 4999 3631 * * 6166 6407 4873 4246 * 3304 * * 90 0 * * * * * * 8148 0 0 E 91 6267 * 1487 1674 * 5035 5191 * 3715 6262 * 3962 * 5091 * 5880 5017 6030 * 6254 91 0 * * * * * * 8148 0 0 E 92 4350 * 3020 2040 * 6453 6186 4651 2354 4080 6580 5185 * 5442 4377 3446 * 4594 * 5463 92 0 * * * * * * 8072 0 0 V 93 * 5965 5865 * 4330 * * 1684 * 1855 6052 * * * * * * 1739 * 6071 93 41 5160 * 1255 783 * * 8072 1666 0 R 94 6044 * 4472 1432 * * * 4999 3197 * 5807 * * 2752 2528 4848 4873 * * 5615 94 0 * * * * * * 7899 0 0 A 95 3185 5897 1757 2375 * 3594 * * 4508 * * 5906 * 5205 5643 2967 4352 5851 * * 95 0 * * * * * * 7564 0 0 V 96 4074 * * 4397 5328 * * 2338 5295 2718 3180 * 5109 * 5133 4234 4046 2617 5377 5354 96 0 * * * * * * 7274 0 0 L 97 * * * * 4649 * * 2962 * 1180 3045 * * * 4827 * * 2094 * * 97 0 * * * * * * 6858 0 0 E 98 4062 * 4049 2079 * * * * 2512 * * * * 2221 2859 * 3116 * * * 98 0 * * * * * * 5950 0 0 L 99 * * * * * * * * * 508 * * * * * 1752 * * * * 99 0 * * * * * * 3911 0 0 G 100 * * * * * 0 * * * * * * * * * * * * * * 100 0 * * 0 * * * 2591 0 0 //