HHsearch 1.5 NAME c2nabA_ FAM FILE c2nabA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2nabA_.a3m DATE Sat Mar 12 08:37:00 2016 LENG 41 match states, 41 columns in multiple alignment FILT 102 out of 11932 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.5166 2.8391 SEQ >ss_dssp CTTCSSCTTCCEECTTTCCEESCHHHHHHHHHGGGGSCSCC >sa_dssp EECEEECEDCECEAEEDDDDBCDEECBEECCECEEEDEEEE >ss_pred CCCEECCCCCCEEECCCCCEECCHHHCCEEEEEECCCCCCC >ss_conf 97235168836161656838920234432254003876699 >Consensus gHxxxHtxekpyxCxxCxkxFxxxsxlxxHxxxHtgekPyk >c2nabA_ GAMEVQTSQKSYVCPNCGKIFRWRVNFIRHLRSRREQKPHK >UniRef50_A2A7I1(220-258:336) Novel KRAB box domain containing protein (Fragment) n=15 Tax=Murinae RepID=A2A7I1_MOUSE E=3e-05 s/c=1.28 id=23% cov=95% ---RIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYK >UniRef50_Q8T362(269-309:341) Snail zinc finger protein n=1 Tax=Podocoryna carnea RepID=Q8T362_PODCA E=4e-12 s/c=1.76 id=26% cov=102% GHIRTHTGERPFVCSYCGRAFADRSNLRAHMQTHVDVKKYE >UniRef50_Q9VDQ5(196-235:319) CG4854 n=10 Tax=Drosophila RepID=Q9VDQ5_DROME E=7e-09 s/c=1.54 id=29% cov=100% -HMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYK >UniRef50_C3ZD40(28-67:458) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZD40_BRAFL E=6e-08 s/c=1.46 id=20% cov=100% -HQRIHSGFRPYQCKLCEKTFYHSGSYNEHVKVHTGTKAHQ >UniRef50_Q4RVU4(975-1014:1637) Chromosome 9 SCAF14991, whole genome shotgun sequence. (Fragment) n=5 Tax=Clupeocephala RepID=Q4RVU4_TETNG E=0.0003 s/c=1.16 id=18% cov=98% -HQLSHTNDRPFKCDFCKYSTSKEEFLVSHLAIkHTGEKPF- >UniRef50_UPI00017C3A14(110-149:149) PREDICTED: similar to zinc finger protein 17 n=4 Tax=Bos taurus RepID=UPI00017C3A14 E=7e-05 s/c=1.21 id=24% cov=100% -HQKIRTGIQLYEHSKCGKCFKDKAYFIKYQRVHTGESPYE >UniRef50_Q17BM5(626-664:690) Putative uncharacterized protein n=3 Tax=Culicini RepID=Q17BM5_AEDAE E=0.0004 s/c=1.18 id=20% cov=98% -HKQFHGGEK-FSCDHCRKVYATSSMLKTHKLSHSNDRPHR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4079 0 0 A 2 5159 * * * * * 78 * * * * * * * * 5355 * * * * 2 18 6330 * 0 * * * 5965 1000 0 M 3 5903 * * 4497 6457 * 4822 3815 3404 3079 2106 5197 * 2218 4658 * 5458 3802 * * 3 11 7041 * 0 * * * 5965 1000 0 E 4 6305 * * 4498 * 5848 * 5796 2670 4243 * 3592 6791 4110 1277 4853 4072 6857 * 4944 4 0 * * * * * * 5897 0 0 V 5 6496 5561 * 7213 6506 6648 6417 2563 4473 4029 4473 6170 * * 4521 2652 2087 2682 * * 5 12 6901 * 0 * * * 5907 1000 0 Q 6 * * 6628 * * * 208 * * 6576 * 5637 * 5892 5866 6244 * * * 4423 6 33 5472 * 1585 585 * * 6204 1593 0 T 7 4399 * 6581 4198 4981 * 6169 4121 5799 5475 5515 4003 6365 4882 4554 2532 1391 5861 * * 7 0 * * * * * * 6195 0 0 S 8 4927 * 3554 3397 * 1527 * * 4309 4412 * 4033 5444 4171 3578 4233 4969 5288 6832 * 8 24 5934 * 1296 755 * * 6195 1559 0 Q 9 4517 * 3304 1130 * 4742 * 4571 4485 5845 * 4345 5413 3972 6751 6778 5162 3754 * * 9 15 6550 * 1585 585 * * 6195 1000 0 K 10 6332 * * 5639 * 5209 5760 * 1087 6263 4951 4305 * 4639 2010 5478 5205 * 6778 6904 10 14 6659 * 0 * * * 6195 1000 0 S 11 5135 6688 5730 5976 * 6353 5717 6358 4223 3975 6575 4404 970 6108 4104 3914 4432 6263 * * 11 0 * * * * * * 6195 0 0 Y 12 * 6707 * * 1899 * 3537 6564 * 5454 * 5724 * 6159 5524 * * * 6358 900 12 0 * * * * * * 6195 0 0 V 13 4907 6743 5021 2799 * * 5045 6447 1999 4765 4796 6453 4179 3042 4222 3921 4636 3830 * * 13 0 * * * * * * 6195 0 0 C 14 * 192 * * 5810 6195 5881 * * * * * * * * 4892 * * * 4561 14 0 * * * * * * 6195 0 0 P 15 5164 * 3887 3735 * 4595 5832 * 2786 5217 * 3004 2608 5555 4980 2519 3844 6277 * * 15 0 * * * * * * 6195 0 0 N 16 * * 3499 2081 4691 * 3417 3398 3665 4195 5398 5903 * 3296 * * 5750 3751 5515 4119 16 29 5642 * 1000 1000 * * 6195 1558 0 C 17 * 168 * * 6226 5597 * * 6342 * * * * * * 5376 * * 6270 5220 17 0 * * * * * * 6195 0 0 G 18 5631 * 3323 3404 5976 1207 5631 * * * * 3708 3733 5831 4646 4043 6481 * 5618 6098 18 18 6342 * 1000 1000 * * 6195 1000 0 K 19 5792 6585 * 4395 6209 6919 6958 * 923 6343 4656 5567 * 6691 2522 5390 5643 * * 3922 19 0 * * * * * * 6195 0 0 I 20 2563 4081 6195 * * 3669 * 4797 4712 6260 5452 6160 6447 6437 2977 2331 2599 4586 * * 20 0 * * * * * * 6195 0 0 F 21 6157 5274 * * 369 * * 6260 * 4337 * * * * * 5618 5754 * * 3571 21 0 * * * * * * 6195 0 0 R 22 4120 6003 6753 * * 5459 6659 4421 2564 4445 * 4437 4007 6609 2513 2744 2676 5920 * 7118 22 0 * * * * * * 6195 0 0 W 23 6263 * 4148 5617 * * 3759 6659 4938 4750 * 5590 * 2422 2695 3010 3325 6739 2930 5041 23 0 * * * * * * 6195 0 0 R 24 3200 6768 5749 5774 6159 5167 6872 6226 2022 4848 * 4731 4488 4412 3248 2369 4556 5973 * 6160 24 0 * * * * * * 6195 0 0 V 25 3071 5498 5205 4012 4854 4023 4830 6169 5025 * * 5934 5510 4628 6035 1385 4264 4924 5515 6628 25 0 * * * * * * 6195 0 0 N 26 4408 5754 3587 5495 * 5041 2715 * 5692 5205 6447 2955 * 3749 4220 2602 3816 5742 * 3698 26 0 * * * * * * 6195 0 0 F 27 * 5792 * * 3243 * * 6227 6688 647 3837 * * 6994 4063 * * 4536 * 4883 27 0 * * * * * * 6195 0 0 I 28 5715 7202 4459 5468 6365 5926 5545 3772 2414 6048 6157 3631 * 3582 3151 4279 3320 3238 * 4984 28 0 * * * * * * 6195 0 0 R 29 4614 * 4628 3808 * 5894 3710 3973 3188 4825 5387 4378 * 4118 2346 3729 5207 3236 * 6575 29 0 * * * * * * 6195 0 0 H 30 * 6162 * * * * 128 * * * * 5979 * * 5278 * * * * 5102 30 13 6815 * 0 * * * 6195 1000 0 L 31 6316 * * 2832 5278 * 5262 3540 3829 2511 2455 * * 2750 3922 * 6708 4526 * 6226 31 0 * * * * * * 6195 0 0 R 32 4031 6159 * * 4780 6169 6641 5016 2465 3170 6098 5269 6481 5229 1367 5633 4770 5755 * * 32 11 7064 * 0 * * * 6195 1000 0 S 33 5817 * * * 5086 * * 2187 6191 4734 5667 5453 * 6387 4509 2395 2214 2739 6133 6158 33 13 6764 * 0 * * * 6088 1000 0 R 34 * * * * * * 162 * * * * 6011 5796 5413 5932 * * * * 4925 34 0 * * * * * * 6090 0 0 R 35 3472 * 6894 6403 5993 6176 * 6754 5045 6046 5194 4454 * 5611 4825 1976 1344 5604 * 6947 35 0 * * * * * * 6088 0 0 E 36 5169 * 3976 2757 * 947 * * 4438 * * 3325 * * 4456 5526 5687 * 6742 * 36 0 * * * * * * 6088 0 0 Q 37 4936 * 3406 1154 6652 5474 * 4311 3337 5339 6464 5276 * 3811 5356 6336 5494 4628 * 6743 37 0 * * * * * * 5950 0 0 K 38 * * * * * * 6259 * 937 * 5456 5206 * 4906 1732 4215 6084 * * 6413 38 0 * * * * * * 5958 0 0 P 39 4397 * 5601 * * * 5492 5872 5980 4920 6541 4766 470 6440 3993 * * * * * 39 0 * * * * * * 5958 0 0 H 40 * * * * 1829 * 2474 * * * * * * * * * * * * 893 40 0 * * * * * * 5940 0 0 K 41 * * * 2126 * * * * 1044 * * * * 2225 3799 * * * * * 41 0 * * 0 * * * 5397 0 0 //