HHsearch 1.5 NAME c2n9pC_ FAM FILE c2n9pC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2n9pC_.a3m DATE Sat May 28 09:04:59 2016 LENG 100 match states, 100 columns in multiple alignment FILT 107 out of 984 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.5 EVD 0.4221 -0.4502 SEQ >ss_dssp CCSCCSCSCCCTTCCBCCEEESSSSCCEECCBCSSSCSHHHHHHHHHHHTCCTTTCEEEETTEEECTTSCSTTTTCTTCEEEEECCCCCTTTSCCCCTTC >sa_dssp EEEDEEEEEEDEEDDBDACACBEEEDDEDBECBAEECADDAAEEBCECBECCCEDBDACCEDEDADDEDDACEBEADDDCADADDEEEDEEEEEEEEEEE >ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEECCEECCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCC >ss_conf 9665544216899779999995799499997498753899999999885899310799988888567727999099998899997488988888888998 >Consensus xxxxxxxxxxxxxxxmxIxvkxxxgxxxxixvxxxxtVxxlKxxixxxxxixxxxxrLifxGkxLxdxxtLxxyxIxxxtixlvxxxxxxxxxxxxaxxg >c2n9pC_ MAHHHHHHVDDDDKMLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSG >UniRef50_Q5CXV9(20-107:362) RAD23p, UB+UBA domains protein (Fragment) n=3 Tax=Cryptosporidium RepID=Q5CXV9_CRYPV E=7e-06 s/c=0.58 id=19% cov=83% -------------NAMKIKIRTVQNTEMEVEVEADYSIEKVKQAIQELNPVmEASRLKLIFAGRILNDSQTVQDVGIkeGERLVVLLSKGASQKAAES-- --- >UniRef50_Q5N715(117-211:236) Ubiquitin-like n=11 Tax=Magnoliophyta RepID=Q5N715_ORYSJ E=8e-07 s/c=0.58 id=20% cov=65% -------------------------QWHDVSIDSTATFGDLKVMLSLVTGLWPRDQRLLYKGKERDDGDHLHMVGVQDKDKVLLLEDPA----------- >UniRef50_B3LY19(4-89:398) GF18215 n=1 Tax=Drosophila ananassae RepID=B3LY19_DROAN E=4e-06 s/c=0.61 id=15% cov=86% ------------EESIDIVAKG-NGREAIVSIRQNELIRNLRALVAVRFEQAIARIVLVFAGEVLQDVGTIDGQGiISGVTVHVVCRPEQSQGGGGQAP- - >UniRef50_Q12285(63-172:212) Ubiquitin-like protein MDY2 n=6 Tax=Saccharomyces cerevisiae RepID=MDY2_YEAST E=2e-05 s/c=0.46 id=18% cov=96% ----HQDQQGQDNAAVHLTLKKIQAPKFSIEhdFSPSDTILQIKQhLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTpaNSTITVMIKPNPtiskep eaekSTNSPAPAPP- >UniRef50_C4YBU8(1-87:432) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4YBU8_CLAL4 E=0.0001 s/c=0.54 id=17% cov=78% -----------------------NGDTTGIEISNDFTLADLKAYIEAESGVNQTNMVLCHNNKQLQgSDSTLQNLGLADDDILVLRTQTQQAATITPPGA G >UniRef50_C3ZIR1(129-232:232) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZIR1_BRAFL E=8e-08 s/c=0.56 id=20% cov=97% MISEEHSESDPNDvpeslttgEEVSLKLRLSTGKDLKLNVQTTDSVLHIKKRLNAEEGIESSRQRWYFSGKLLQDKMRIEDAKIPKGFVVQVIVSQPDPT PVDG---- >UniRef50_B7XIB3(1-83:101) Putative uncharacterized protein n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XIB3_ENTBH E=0.001 s/c=0.54 id=13% cov=67% -----------SNKTIDIKLESPSGSLIKVKAKENNKARKLLEAYCKMKYLSPSDFTLIYKGNIIKENMTLIENNIK----------------------- >UniRef50_A2ETT4(1-79:250) UBA/TS-N domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2ETT4_TRIVA E=0.0003 s/c=0.59 id=19% cov=80% ---------------MNVNFRTILGKTYTITVQPNQTLTDAKRILSVQEDISLEKAQFIYRAEILQENIPFSTLQIQQDRYIVIHNSSPKKATP------ >UniRef50_A0ECD1(2-80:513) Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Oligohymenophorea RepID=A0ECD1_PARTE E=0.0007 s/c=0.57 id=18% cov=71% -------QIEEERKIIQIEIKYTTEIHKNVPIDLNGTVLKFQETLQELLKVPIEKQKIMIKGSLLKKDQDISKLNLK----------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * 1580 * * * * * 587 * * * * * * * * * 1 0 * * * * * * 2330 0 0 A 2 2102 * * * * * * 1916 * * * * * * * 994 * * * * 2 0 * * * * * * 2930 0 0 H 3 * * * * * * 1278 * * * * 1210 * * * 2686 * * * * 3 0 * * * * * * 4047 0 0 H 4 * * 2817 2686 * * 2971 * * * * 2762 * 2722 * 2906 2808 * * * 4 0 * * * * * * 4047 0 0 H 5 * * * 2919 * * 1037 * * * * 1394 * * * * * * * * 5 0 * * * * * * 4313 0 0 H 6 * * * 2300 * * 1824 3449 * * * 3194 * 2303 * 3170 * * * * 6 0 * * * * * * 4789 0 0 H 7 * * 3397 3374 * * 3668 * * 3531 * * * 3313 * 1892 3448 3342 * 3588 7 0 * * * * * * 4963 0 0 H 8 3456 * * 3546 * * 3773 * 3669 3710 * 1601 * 2528 3441 * * * * * 8 0 * * * * * * 5092 0 0 V 9 * * * * * * * 3893 3746 2861 2659 3849 * 2778 * 3858 3759 2292 * * 9 0 * * * * * * 5485 0 0 D 10 * * 1237 4281 * 4158 * * 3996 * * 3082 4034 2521 * 4264 * * * * 10 0 * * * * * * 5854 0 0 D 11 4420 * 2574 1736 * 3611 4579 * * * * 4523 4665 3663 * 3664 4628 4697 * 4583 11 0 * * * * * * 6345 0 0 D 12 * * 2103 3005 * 4075 4987 4947 5207 * * 3644 3406 4942 5041 2157 5013 * * * 12 40 5207 * 1585 585 * * 6739 1000 0 D 13 * * 1950 2503 * 3170 * * 4264 * * 2609 3678 4271 * 3717 * 4977 * * 13 34 5443 * 3000 193 * * 6945 1000 0 K 14 5533 * 5736 2438 * 3946 5683 * 2981 5814 5447 2694 5398 2887 4360 3037 5803 * * 5537 14 0 * * * * * * 7165 0 0 M 15 4388 * * 3500 * 4713 * 4855 4851 3647 2749 6120 5815 3539 5971 2896 2162 4798 * * 15 52 4811 * 2187 358 * * 7325 1752 0 L 16 6187 * * * 5396 * * 1795 * 2991 1463 * * 6362 6065 * * 3125 5109 6051 16 0 * * * * * * 7677 0 0 E 17 6455 * 3162 3606 * * 4436 4410 3273 4286 * 4166 4831 2371 3874 3656 3887 4815 * 6389 17 0 * * * * * * 7690 0 0 V 18 * * * * 5253 * * 1266 * 2065 * * * * * * * 1649 * * 18 0 * * * * * * 7731 0 0 L 19 * 6498 * 6207 3385 * 4412 3789 2622 4652 6335 3252 * 5549 4769 3819 2183 5332 * 3902 19 15 * 6586 * * * * 7735 0 0 V 20 5458 4980 * * 3173 * * 1775 * 3098 * * * * * * 6381 1273 * * 20 36 * 5346 * * * 0 7794 0 1000 K 21 6519 5564 * 3899 * * 6659 * 1291 6336 * 5215 6785 5367 1816 5454 4132 4446 * * 21 31 * 5534 * * 549 1660 7859 0 2277 T 22 6455 5518 3321 6493 5588 5538 5432 4989 6500 3567 4042 3598 6912 6874 6144 3082 1923 4462 5092 4943 22 90 5672 4604 1892 453 556 1645 7883 1685 2274 L 23 4280 * 5454 5578 4312 5149 * 3255 * 2010 3673 5265 3447 5630 4723 3539 5163 3604 * 5448 23 14 6652 * 0 * 0 * 7858 1000 3188 D 24 5774 6632 2440 4310 * 3416 6949 * 4370 4424 6341 2481 * 3845 4592 3445 3158 6171 * 5642 24 74 4603 6781 0 * * * 7874 2903 0 S 25 5574 * 3060 4099 * 861 5615 * 5300 * * 4154 * 4747 6047 3763 * * * 5485 25 17 6446 * 0 * 0 * 7869 1000 1000 Q 26 * * 4713 3011 5909 5058 * * 1956 6356 * 3801 4662 2888 2921 3651 4881 5092 * * 26 0 * * * * * * 7886 0 0 T 27 6495 * 4919 3454 4655 4776 6385 3717 3621 4312 * 4762 4439 * 3877 3048 2275 3710 6188 * 27 14 * 6707 * * * * 7993 0 0 R 28 5474 * 6743 5943 2353 * 3596 2836 5027 2899 6000 7051 * * 5951 4716 4589 3378 5788 2882 28 47 4976 * 0 * 0 * 7992 2409 1000 T 29 5715 5779 4095 3152 4862 4746 6729 5059 3484 5618 * 6509 3598 4557 4517 3295 2143 4477 * 5794 29 0 * * * * * * 8138 0 0 F 30 6554 * * 6067 3095 * 6897 1847 6679 2104 4346 6640 * 6841 * * * 2255 * 4288 30 13 6855 * 2000 415 * * 8138 1000 0 I 31 4743 * 2956 2529 * 6878 4435 5926 2959 5608 5661 3424 5825 4246 4396 3376 3571 6754 * 5665 31 27 6761 6771 1000 1000 * * 8138 1000 0 V 32 3885 5306 * * 5774 6420 * 2512 * 2776 4508 5853 6524 6539 * 6490 5071 1262 * 6063 32 11 7023 * 0 * 0 * 8131 1000 1000 G 33 4665 * 3219 2958 6832 4006 5129 * 3999 5269 5712 2568 3786 4488 4781 2577 5793 * * 6708 33 12 6861 * 1585 585 * * 8138 1000 0 A 34 3262 * 4364 3631 6494 5264 6370 6024 5190 3444 * 4743 1880 5659 4061 3366 4906 5125 * 4847 34 31 5536 * 1156 860 * * 8138 1724 0 Q 35 4793 * 2253 4534 5028 5957 5427 6719 4060 4856 5586 2588 5911 5932 * 2625 2778 * 6797 * 35 0 * * * * * * 8138 0 0 M 36 3591 4315 2229 3646 6738 4488 * 5436 6400 4212 5756 4711 6855 3501 5671 3581 3142 6193 5300 5536 36 0 * * * * * * 8138 0 0 N 37 * 6754 5916 4356 4791 5504 * 6725 3284 4276 * 4944 4489 6617 * 3238 997 6789 * * 37 37 5315 * 421 1981 * * 8138 2285 0 V 38 4289 * * * 5411 * * 1656 * 2830 * * * * * * 5473 1168 * * 38 0 * * * * * * 8138 0 0 K 39 2666 6940 4650 3153 6664 2614 * 7041 3248 3291 * 6983 6661 4339 3549 3285 5096 * * 6754 39 0 * * * * * * 8138 0 0 E 40 4198 * 2076 2371 * 5767 5349 5331 4015 5122 6701 4025 * 3011 6495 3277 6571 5862 * 5671 40 0 * * * * * * 8138 0 0 F 41 5754 6704 * * 3091 * * 2808 * 995 5224 * * * * * 7019 2591 6703 * 41 0 * * * * * * 8138 0 0 K 42 * * * * * 6617 5924 4144 548 6347 4844 5753 * 4870 3219 6605 6024 * * * 42 9 7274 * 3170 170 * * 8138 1000 0 E 43 3252 * 4180 2507 6754 5891 5828 4124 2882 5112 6224 4045 5316 2519 4506 5752 4224 6841 * * 43 13 6761 * 0 * * * 8138 1000 0 H 44 2976 * 6024 4822 4635 * 5991 3997 2461 2305 4209 5803 * 3648 3658 5722 6771 4554 * 5800 44 13 6845 * 0 * * * 8138 1000 0 I 45 4315 5389 * * 4631 6509 * 1247 * 2163 5409 5544 * * * * * 2695 * 5026 45 0 * * * * * * 8138 0 0 A 46 2176 4617 6725 2722 4202 5132 4068 * 4749 5799 5955 5253 * 3025 5381 2706 * 5885 * 5647 46 0 * * * * * * 8138 0 0 A 47 4091 6640 4379 1945 6922 7109 * 5317 2788 4641 6760 4579 4869 3692 4078 3521 4767 4539 6745 * 47 41 5157 * 1000 1000 * * 8138 2305 0 S 48 4758 * 5606 2493 6571 * 4260 4800 2615 3648 6347 5766 * 2872 3083 4323 5266 4492 * 5821 48 25 5859 * 616 1524 * * 8138 1735 0 V 49 5046 4496 5735 3365 3892 5671 5151 4215 3867 3196 5540 4462 * 5291 6527 3869 2243 5507 6729 4362 49 14 6719 * 0 * * * 8138 1000 0 S 50 5936 * 3832 3939 5724 1292 5167 6439 4437 6567 * 2879 5852 4949 5317 3917 5287 * * 5489 50 41 6673 5773 1000 1000 * * 8138 1000 0 I 51 4295 4703 * * 4327 * 6047 1556 5325 3139 4894 * 6872 5653 * 5060 4622 2363 6504 5094 51 35 6128 6730 0 * 977 1024 8127 1660 1706 P 52 4296 * 3606 3170 6651 * 5440 * 4395 6886 * 5018 1279 4776 5896 2988 5352 5628 * * 52 23 6713 7244 0 * 0 * 8131 1000 1829 S 53 2922 * 6952 5359 5728 6560 6397 3927 5064 4072 5111 * 2002 5852 5187 3413 4240 2879 6064 5791 53 13 6750 * 1000 1000 * 0 8141 1000 1000 E 54 3577 * 2952 2320 6656 3556 5795 * 4319 * 5580 3011 5808 5357 4542 2588 6734 6634 * 7016 54 13 6839 * 0 * * 0 8141 1000 1000 K 55 4197 * 3413 2998 5669 4436 6478 4584 3290 4523 * 3219 * 3525 2920 4114 5324 4987 * 5552 55 0 * * * * 0 * 8141 0 1000 Q 56 6633 5084 * * 4192 * 6523 2433 * 3162 3576 * * 1305 * 6370 6527 4027 * 5320 56 0 * * * * * * 8138 0 0 R 57 6760 6771 6864 4252 * * * 4841 2185 5260 6878 5717 * 4104 1416 5234 4445 3691 5844 6400 57 0 * * * * * * 8138 0 0 L 58 * * * * 3501 * * 2807 * 567 6480 * * * * * * 4497 4717 * 58 0 * * * * * * 8138 0 0 I 59 6822 4494 * 6596 4186 * * 1455 6725 3050 4621 6494 * 4750 7020 5225 5131 2457 * 4251 59 0 * * * * * * 8138 0 0 Y 60 6624 3442 * * 1345 * 4334 6193 5971 3591 * * * * * 6495 * 5584 5152 1826 60 13 * 6797 * * * * 8138 0 0 Q 61 3283 6021 3398 5453 * 4462 5762 * 2290 5973 6477 2433 6614 4352 3045 3683 * 6749 5958 * 61 0 * * * * 0 * 8133 0 1000 G 62 4224 * 4834 5939 * 534 5971 * 6916 * 6589 3874 * 5329 4660 5308 6370 * * * 62 36 5979 6775 1006 994 * * 8138 1641 0 R 63 6522 6189 5775 4624 * 5489 4520 5330 1512 6698 * 4329 * 2659 2677 5237 4455 5753 * 6562 63 29 5671 * 1468 647 0 * 8128 1756 1000 V 64 5050 * * 2941 6841 * * 2305 4925 3250 4728 * 3816 3620 4272 6864 6845 2387 6482 5104 64 0 * * * * * * 8138 0 0 L 65 * 6193 * * 5240 * * 3377 * 445 3865 6605 * * 6224 * * 4767 * * 65 56 4725 * 0 * * * 8138 2687 0 Q 66 5164 * 3147 2797 * 6214 4613 5575 2405 5124 * 4051 6767 3295 3914 2807 5303 5905 * * 66 89 4060 * 0 * * * 8116 3544 0 D 67 6799 * 807 4676 * 6738 5556 6694 6020 4755 6500 2491 4678 * * 4538 6803 * 7037 * 67 27 5767 * 974 1026 * * 8116 1792 0 D 68 4258 * 2299 2820 * 3911 4593 * 5318 6635 * 2782 5912 4699 * 2729 3516 6547 6588 * 68 73 4348 * 612 1533 * * 8116 2986 0 K 69 4751 6562 3716 3849 4632 5119 4528 4502 2541 5101 3920 4686 * 3569 3013 4818 4289 5465 5820 6762 69 36 5341 * 0 * * * 8109 1779 0 K 70 6716 * 4662 6422 6730 5638 6825 4953 4427 3279 * * 4157 4884 4950 3057 1222 5221 * 5565 70 27 5775 * 468 1851 * * 8102 1607 0 L 71 * * 6138 * 4444 * * 2138 * 762 4876 * * * * * 6413 3694 * * 71 0 * * * * * * 8100 0 0 Q 72 3153 6469 3906 3052 6762 3345 4901 6277 3740 4958 * 5687 * 3953 4194 2232 4754 * * 4661 72 14 6734 * 1000 1000 * * 8064 1000 0 E 73 3768 5596 1809 2478 5317 6528 5656 5605 4712 * 6212 4651 * 3447 * 2841 5633 * * 5509 73 29 5632 * 0 * * * 8064 1340 0 Y 74 3782 3176 * * 5711 * 5171 5043 6736 2472 6837 6277 * 5740 6729 5030 * 4656 * 1218 74 72 4361 * 1717 523 * * 8064 3348 0 N 75 4992 5999 4895 4388 * 1309 4634 * 3004 * * 2569 6642 5071 5764 4007 6149 * * * 75 74 4314 * 287 2470 * * 8064 2982 0 V 76 5697 * * 6149 6500 * 6627 1186 5519 2354 5749 5687 * * * 6445 6627 2128 * * 76 327 2301 * 212 2873 * * 8064 5775 0 G 77 5685 * 3233 3930 6350 4040 5979 * 2128 6430 * 2756 4764 3629 4127 3432 3970 * * * 77 224 2799 * 311 2367 * * 8125 5160 0 G 78 * * 1746 2731 * 2149 * * 4516 * * 2981 4244 4857 6524 4873 6424 6432 * * 78 47 4967 * 0 * * * 7930 2311 0 K 79 3714 6567 2540 6015 * 3767 3590 * 3779 6294 * 3745 * 3594 5001 2341 4909 4888 * 5030 79 58 4670 * 429 1960 * * 7807 2669 0 V 80 4191 4599 3444 * 6533 5524 * 4149 6423 4591 * 6961 * 6008 5233 2778 1488 3088 * * 80 77 4268 * 1131 880 * * 7812 2808 0 I 81 5866 * * 6119 4992 * * 1437 5198 2657 5379 * * 5152 6467 * 5518 1833 * 5978 81 43 5086 * 1847 470 * * 7812 2363 0 H 82 * * * * 4417 * 1607 2530 * 3704 4801 4996 * 4816 6297 * 5411 2404 * 4405 82 0 * * * * * * 7805 0 0 L 83 4416 * * 6321 4818 * 5910 3059 * 1469 2736 * 6638 6495 6294 4698 6357 2744 * 5408 83 38 5270 * 1838 473 * * 7789 1764 0 V 84 * 4860 * * 6339 * 6384 2385 * 2445 4107 * * 6666 * 5141 6161 1275 * 4550 84 0 * * * * * * 7840 0 0 E 85 3938 6244 6420 4386 * 4131 5147 3382 3314 2763 5497 4183 4704 4270 3671 4051 5286 3306 * * 85 49 4907 * 1323 736 * * 7744 2057 0 R 86 5140 * * 5719 * 4823 5084 4786 2372 5692 5337 4532 4446 4812 1447 4376 4681 4805 * * 86 0 * * * * * * 7706 0 0 A 87 3341 * 4178 4549 * 4564 5434 * 3003 3274 5911 6172 3138 3836 3314 2728 4497 * * * 87 22 6073 * 2807 222 * * 7598 1000 0 P 88 3413 * 5988 4357 * 4066 4717 5984 2527 * * 6107 2003 5156 4385 3502 4646 3531 * * 88 63 4549 * 2439 294 * * 7649 2351 0 P 89 3065 * * 4871 5407 3995 5810 5011 3928 * * 4935 1746 3885 3978 3066 5872 4405 * * 89 23 5979 * 3322 152 * * 7641 1000 0 Q 90 3581 * 5034 3783 * 3900 4680 5583 3191 4635 * 2881 3594 3533 4060 3614 4239 5792 5711 * 90 28 5711 * 1585 585 * * 7606 1000 0 T 91 2896 * * 4640 * 5559 * 3648 3442 4744 * 3988 2365 4785 5812 3179 2978 4421 * * 91 0 * * * * * * 7586 0 0 H 92 2889 * 4120 4307 * 4006 3143 * 4769 * * 3026 4989 3124 4891 3173 3124 5915 * * 92 0 * * * * * * 7583 0 0 L 93 4079 * 4706 * * 4311 * 5812 5315 3963 * 4466 1977 4755 5770 2920 2349 4009 * * 93 0 * * * * * * 7489 0 0 P 94 3197 * * 3640 * 3788 * 5451 5371 5561 5730 5709 1494 4627 4434 3560 5746 3523 * * 94 0 * * * * * * 7412 0 0 S 95 2316 * 4207 * * 3014 * 5274 * 5351 * 3219 3786 5330 4191 2692 2941 5249 * * 95 0 * * * * * * 7223 0 0 G 96 3254 * * * * 1705 * * 4248 4134 * 4879 2933 4169 5041 3282 3306 5374 * * 96 0 * * * * * * 7131 0 0 A 97 1152 * 4715 4826 * 4068 * * 3429 5064 * 5229 5004 * * 3435 2795 * * * 97 0 * * * * * * 6926 0 0 S 98 2937 * * 4908 * 3696 * * * * * 4923 1939 4700 * 1323 5196 * * * 98 0 * * * * * * 6641 0 0 S 99 2016 * * 4522 * 3070 4865 * * * * * 1922 * * 1776 * * * * 99 0 * * * * * * 6278 0 0 G 100 * * * * * 0 * * * * * * * * * * * * * * 100 0 * * 0 * * * 4579 0 0 //