HHsearch 1.5 NAME c2n9oA_ FAM FILE c2n9oA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2n9oA_.a3m DATE Sat May 28 08:22:10 2016 LENG 42 match states, 42 columns in multiple alignment FILT 55 out of 59 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.5 EVD 0.4751 2.6351 SEQ >ss_dssp CCTTSCTTCCCCEEETTTTEEECCBTTTTBCTTTCCCCEEEC >sa_dssp EDEEDDEEDCCEBDAEECEDEBEADDEEDCACECDDCECDDE >ss_pred CCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECC >ss_conf 963025778870561213137851756745756588821219 >Consensus xxMaeaxxxxxrywChxCxxxVxxxxxdxxCPxCxxGFiEEl >c2n9oA_ GSMAEASPHPGRYFCHCCSVEIVPRLPDYICPRCESGFIEEL >UniRef50_Q5VME8(1-45:338) Os06g0101300 protein n=3 Tax=Poaceae RepID=Q5VME8_ORYSJ E=3e-08 s/c=1.33 id=39% cov=98% --MSSSPAHAQRFYCHQCDRTVPIPPPtspdaDVLCPFCGGGFVEEL >UniRef50_B3RRI7(1-43:283) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RRI7_TRIAD E=2e-07 s/c=1.32 id=41% cov=98% --MAEATVEdvpSTRYFCYNCQEEVSSKSQSNLCPQCGGGFVEQL >UniRef50_Q9LT14(67-110:386) Genomic DNA, chromosome 3, P1 clone: MPN9 n=7 Tax=rosids RepID=Q9LT14_ARATH E=1e-06 s/c=1.24 id=36% cov=100% GSAAAAPEVDKMFFCYQCNQTVTIsisSSADPFCPICNQGFLEE- >UniRef50_B6TY50(1-40:321) RHC1A n=5 Tax=Andropogoneae RepID=B6TY50_MAIZE E=1e-07 s/c=1.43 id=42% cov=95% --MTEAAVI-TRYWCHGCEKVIEEAMgEEIKCPFCGGGFIEEM >UniRef50_A9PGC2(2-37:264) Putative uncharacterized protein n=2 Tax=rosids RepID=A9PGC2_POPTR E=4e-07 s/c=1.56 id=32% cov=88% ------SSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQEL >UniRef50_B9T010(1-44:335) Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T010_RICCO E=2e-05 s/c=1.15 id=36% cov=93% --MSSPPTTP--YWCYRCSRFVQASwrrqeqEEEITCPDCASGFLEQL >UniRef50_Q9SDG0(1-45:329) Os01g0276600 protein n=3 Tax=Oryza sativa RepID=Q9SDG0_ORYSJ E=5e-05 s/c=1.09 id=39% cov=98% --MAEEAAAGGLYYCHMCASTVSAVAAaegevEIKCPYCHSGFVEEI >UniRef50_Q7XD81(9-50:370) cDNA clone:J033094G14, full insert sequence n=5 Tax=Oryza sativa RepID=Q7XD81_ORYSJ E=5e-05 s/c=1.16 id=32% cov=90% -----AAVARKQYFCYQCNRTVLLPasaaaAGALSCPECRGDFIEEV # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1552 0 0 S 2 * * * * * * * * * * * * * * * 0 * * * * 2 0 * * * * * * 1552 0 0 M 3 3765 * * * * * * * * * 110 * * * * * * * * * 3 0 * * * * * * 3199 0 0 A 4 508 * * 3728 * 4085 * * * * * * * * * 3439 3835 * * * 4 0 * * * * * * 3199 0 0 E 5 3765 * * 470 * * * * * * * * * * * 2291 * * * * 5 45 5018 * 0 * * * 3199 1000 0 A 6 550 * * 3746 * * * * * * * * 4676 4960 4464 2989 * * * * 6 82 4173 * 2585 263 * * 3550 1110 0 S 7 1386 * * * * * * * * * * * 2018 * * 1993 3845 4331 * * 7 44 * 5055 * * * * 3681 0 0 P 8 2720 * * 3836 * * * * * * * * 2974 5193 * 2706 3474 1395 * * 8 92 * 4014 * * 0 * 3703 0 1000 H 9 3108 * 3835 2814 * 4002 4091 4896 * * 4569 4531 4835 5206 5194 3046 2890 3917 5636 * 9 325 2810 4086 1483 639 * 0 3697 1863 1510 P 10 3593 * 4800 5354 * 3844 * * * * 5350 * 1808 4542 1986 3447 3477 * * * 10 123 5446 4095 0 * 1204 822 3613 1000 1714 G 11 4049 5277 * * * 3022 4504 * 3048 * * 3114 3096 2704 * 3085 3037 * * * 11 39 5232 * 0 * 1019 981 3666 1000 1959 R 12 * * * 4983 * * * * 4644 5152 5055 * * 3622 1050 2593 2832 * * * 12 22 6031 * 2000 415 0 * 3550 1000 1510 Y 13 * * * * 1701 * 3082 * * * * * * * * * * * * 800 13 0 * * * * * * 3551 0 0 F 14 * * * * 1458 * * * * * * * * * * * * * 997 2889 14 0 * * * * * * 3597 0 0 C 15 * 0 * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 3597 0 0 H 16 * * * * * * 623 * * * * * * * * * * * * 1512 16 0 * * * * * * 3597 0 0 C 17 4685 4761 * 5426 6113 4169 4775 * 3968 5700 2562 5291 * 2410 2753 3085 5335 4742 * * 17 0 * * * * * * 3597 0 0 C 18 * 0 * * * * * * * * * * * * * * * * * * 18 0 * * * * * * 3597 0 0 S 19 4247 * 4331 3717 * 5426 5700 * 4052 * * 2398 * 3530 2539 2246 4529 5939 * * 19 0 * * * * * * 3597 0 0 V 20 3573 * * 4159 * 4663 * 3768 4773 4934 * * * 2757 1357 5805 4968 3480 * * 20 0 * * * * * * 3597 0 0 E 21 4465 * * 1607 3212 * * 5964 * * 4456 * 3354 4943 5210 4511 2654 3715 * 5586 21 0 * * * * * * 3597 0 0 I 22 * * * * 4943 * * 1479 * 5595 * * * * * * 5719 813 * * 22 30 5598 * 1000 1000 * * 3597 1000 0 V 23 * 5335 4763 3417 * 4975 * * * 5272 * 3344 5805 4269 1676 3163 3690 3641 4767 * 23 25 * 5864 * * * * 3597 0 0 P 24 4814 * * 4951 * * * 2933 * 2306 * 4933 1476 * 4301 4005 * 3415 * * 24 150 3592 5979 1299 753 0 * 3598 1778 1000 R 25 3257 * * 4591 * * 5256 5450 3362 4715 * 4442 2860 * 2660 3296 * 2530 4248 * 25 137 3461 * 1754 507 0 * 3592 2032 1000 L 26 2793 * * 3702 * 2752 * * * 2381 3306 4854 4046 * 3778 3065 4325 * * * 26 135 3482 * 490 1797 * * 3597 2087 0 P 27 3097 * 4352 2565 * 3812 * * * * * * 2299 2236 3626 3701 5598 * * * 27 93 4004 * 1755 507 * * 3597 1714 0 D 28 3927 * 990 1695 * * * * * * * 4943 * * 5344 4549 5517 * * * 28 77 4265 * 0 * * * 3597 1425 0 Y 29 4153 * * * 2492 * 5335 2393 * 3207 3607 5291 3191 * * * * 3181 * 3118 29 0 * * * * * * 3597 0 0 I 30 5546 * * 4275 5432 * * 3456 2747 3724 * * * * * 3533 1514 2723 * * 30 30 5595 * 0 * * * 3597 1000 0 C 31 * 0 * * * * * * * * * * * * * * * * * * 31 0 * * * * * * 3596 0 0 P 32 5413 * * * 5283 * * * * * * * 175 * * 3944 * * * * 32 0 * * * * * * 3596 0 0 R 33 4459 * 3849 3824 3499 5995 2751 4806 * 4858 * 4213 * 4751 2718 4934 3901 * * 2748 33 0 * * * * * * 3596 0 0 C 34 * 0 * * * * * * * * * * * * * * * * * * 34 0 * * * * * * 3596 0 0 E 35 3526 * 2117 3113 * 2684 2784 * * 5575 * 2857 * 6163 4630 4241 * * * * 35 0 * * * * * * 3596 0 0 S 36 * * 3213 3915 * 1557 * * * 4978 * 4858 * 5435 * 1333 * * * * 36 0 * * * * * * 3596 0 0 G 37 * 5466 5277 4465 * 179 * * * * * * * 5429 * * * * * * 37 0 * * * * * * 3596 0 0 F 38 * * * * 0 * * * * * * * * * * * * * * * 38 0 * * * * * * 3596 0 0 I 39 * * * * * * * 1337 * 2239 * * * * * * * 1351 * * 39 0 * * * * * * 3596 0 0 E 40 * * * 192 * * * * * * * * * 3359 * 5213 * * * * 40 0 * * * * * * 3596 0 0 E 41 4961 * * 245 * * * * 4854 * * * * 3483 * * * * * * 41 0 * * * * * * 3578 0 0 L 42 * * * * * * * 2554 * 1320 1904 * * * * * * 2626 * * 42 0 * * 0 * * * 3517 0 0 //