HHsearch 1.5 NAME c2n90B_ FAM FILE c2n90B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2n90B_.a3m DATE Thu Feb 9 12:11:40 2017 LENG 39 match states, 39 columns in multiple alignment FILT 3 out of 7 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.4 EVD 0.4849 2.6125 SEQ >ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCSCCCC >sa_dssp EEEEEEEEDEEEDEDEDEEDDEEEDEDEEEEEDEDEEEE >ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >ss_conf 987657303789999999999999999999977600269 >Consensus mkxdexxfgvsvavglaxfacvxlxxlxlxlnkxgrrsk >c2n90B_ MKKDETPFGVSVAVGLAVFACLFLSTLLLVLNKAGRRNK >UniRef50_UPI0001555E2F(257-293:297) PREDICTED: similar to Spi-B transcription factor (Spi-1/PU.1 related), partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555E2F E=6e-10 s/c=1.76 id=74% cov=97% --QDEGFWGVSVAVGLAVFACVFLSGLLLTLNKCGRRSK >UniRef50_Q03351(424-461:864) NT-3 growth factor receptor n=21 Tax=Euteleostomi RepID=NTRK3_RAT E=3e-09 s/c=1.66 id=56% cov=100% -KPEEDTFGVSIAVGLAAFACVLLVVLFIMINKYGRRSK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 1339 0 0 K 3 * * * * * * * * 1635 * * * 1463 1665 * * * * * * 3 0 * * * * * * 1448 0 0 D 4 * * 650 1463 * * * * * * * * * * * * * * * * 4 0 * * * * * * 1448 0 0 E 5 * * * 0 * * * * * * * * * * * * * * * * 5 0 * * * * * * 1448 0 0 T 6 * * 1463 * * 1665 * * * * * * * * * * 1635 * * * 6 0 * * * * * * 1448 0 0 P 7 * * * * 1665 * * * * * * * 1635 * * * 1463 * * * 7 0 * * * * * * 1448 0 0 F 8 * * * * 546 * * * * * * * * * * * * * 1665 * 8 0 * * * * * * 1448 0 0 G 9 * * * * * 0 * * * * * * * * * * * * * * 9 0 * * * * * * 1448 0 0 V 10 * * * * * * * * * * * * * * * * * 0 * * 10 0 * * * * * * 1448 0 0 S 11 * * * * * * * * * * * * * * * 0 * * * * 11 0 * * * * * * 1448 0 0 V 12 * * * * * * * 1463 * * * * * * * * * 650 * * 12 0 * * * * * * 1448 0 0 A 13 0 * * * * * * * * * * * * * * * * * * * 13 0 * * * * * * 1448 0 0 V 14 * * * * * * * * * * * * * * * * * 0 * * 14 0 * * * * * * 1448 0 0 G 15 * * * * * 0 * * * * * * * * * * * * * * 15 0 * * * * * * 1448 0 0 L 16 * * * * * * * * * 0 * * * * * * * * * * 16 0 * * * * * * 1448 0 0 A 17 0 * * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 1448 0 0 V 18 1463 * * * * * * * * * * * * * * * * 650 * * 18 0 * * * * * * 1448 0 0 F 19 * * * * 0 * * * * * * * * * * * * * * * 19 0 * * * * * * 1448 0 0 A 20 0 * * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 1448 0 0 C 21 * 0 * * * * * * * * * * * * * * * * * * 21 0 * * * * * * 1448 0 0 L 22 * * * * * * * * * 1635 * * * * * * * 561 * * 22 0 * * * * * * 1448 0 0 F 23 * * * * 650 * * * * 1463 * * * * * * * * * * 23 0 * * * * * * 1448 0 0 L 24 * * * * * * * * * 0 * * * * * * * * * * 24 0 * * * * * * 1448 0 0 S 25 * * * * * * * * * * * * * * * 650 * 1463 * * 25 0 * * * * * * 1448 0 0 T 26 * * * * * 1665 * * * * * * * * * * 1635 1463 * * 26 0 * * * * * * 1448 0 0 L 27 * * * * * * * * * 0 * * * * * * * * * * 27 0 * * * * * * 1448 0 0 L 28 * * * * 1463 * * * * 650 * * * * * * * * * * 28 0 * * * * * * 1448 0 0 L 29 * * * * * * * 1463 * 650 * * * * * * * * * * 29 0 * * * * * * 1448 0 0 V 30 * * * * * * * * * * 1463 * * * * * 1665 1635 * * 30 0 * * * * * * 1448 0 0 L 31 * * * * * * * 1463 * 650 * * * * * * * * * * 31 0 * * * * * * 1448 0 0 N 32 * * * * * * * * * * * 0 * * * * * * * * 32 0 * * * * * * 1448 0 0 K 33 * * * * * * * * 0 * * * * * * * * * * * 33 0 * * * * * * 1448 0 0 A 34 1635 1665 * * * * * * * * * * * * * * * * * 1463 34 0 * * * * * * 1448 0 0 G 35 * * * * * 0 * * * * * * * * * * * * * * 35 0 * * * * * * 1448 0 0 R 36 * * * * * * * * * * * * * * 0 * * * * * 36 0 * * * * * * 1448 0 0 R 37 * * * * * * * * * * * * * * 0 * * * * * 37 0 * * * * * * 1448 0 0 N 38 * * * * * * * * * * * 1635 * * * 561 * * * * 38 0 * * * * * * 1448 0 0 K 39 * * * * * * * * 0 * * * * * * * * * * * 39 0 * * 0 * * * 1448 0 0 //