HHsearch 1.5
NAME  c2n5kA_
FAM   
FILE  c2n5kA_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c2n5kA_.a3m 
DATE  Sat Mar 19 08:17:34 2016
LENG  29 match states, 29 columns in multiple alignment
FILT  20 out of 24 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.4 
EVD   0.5303  4.1501 
SEQ
>ss_dssp
CCSSSSCCSSTTSCSCTTSCSSCCSSSCC
>sa_dssp
EDEEEEDBEECEEBEECEEBECEBEEEDD
>ss_pred
CCCCCCCCCCCCCCCCCCCCEECCCCCCC
>ss_conf
98765887874314455623233787888
>Consensus
xexxxqxcpygkkctygxkckxyhperxx
>c2n5kA_
SEHRKQPCPYGKKCTYGIKCRFFHPERPS
>UniRef50_UPI0000E8011B(276-301:611) PREDICTED: similar to chromosome 6 open reading frame 95 n=2 Tax=Neognathae RepID=UPI0000E8011B  E=9e-05 s/c=1.85 id=74% cov=93%
-ESTWQPCPYGKKCTYGNKCKFYHPER--
>UniRef50_UPI0000F1FEF9(388-413:696) PREDICTED: similar to zinc finger CCCH-type containing 12A n=2 Tax=Danio rerio RepID=UPI0000F1FEF9  E=4e-08 s/c=2.27 id=74% cov=93%
-DHKRQLCPYGKKCTYGIKCKFYHPER--
>UniRef50_UPI00016E7D7B(200-227:650) UPI00016E7D7B related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E7D7B  E=1e-07 s/c=2.06 id=69% cov=100%
-EQKKQPCPYGKKCTYGHKCKYYHPERGA
>UniRef50_UPI00006A0825(254-279:555) zinc finger CCCH-type containing 12A n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0825  E=1e-06 s/c=2.07 id=74% cov=93%
-ENKKVQCPYGKKCTYGIKCKFYHPER--
>UniRef50_A8QB70(335-362:392) N4bp1-pending-prov protein, putative n=1 Tax=Brugia malayi RepID=A8QB70_BRUMA  E=2e-06 s/c=1.91 id=52% cov=100%
-QSQSQICPYARRCTYGNKCKYYHPERPN
>UniRef50_UPI000180CC72(483-507:863) PREDICTED: similar to mCG4830 n=1 Tax=Ciona intestinalis RepID=UPI000180CC72  E=6e-05 s/c=1.94 id=69% cov=90%
-EQSKPQCPYGKKCTYGKKCKYFHPE---
>UniRef50_B7QDT2(337-365:699) Putative uncharacterized protein n=1 Tax=Ixodes scapularis RepID=B7QDT2_IXOSC  E=1e-08 s/c=2.10 id=57% cov=103%
AEGAPPACPYGKKCTYGNKCKYYHPERGN
>UniRef50_UPI00017927DF(392-416:632) PREDICTED: similar to CG10889 CG10889-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927DF  E=2e-06 s/c=2.16 id=68% cov=86%
----AETCPYGKKCTYGNKCKFSHPERG-
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
S 1    1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	*	1
       0	*	*	*	*	*	*	1332	0	0	

E 2    *	*	3580	370	*	*	*	*	*	*	*	*	*	2809	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1546	0	0	

H 3    *	*	*	*	*	3671	1405	*	3921	*	*	3734	*	2351	*	2274	*	*	*	*	3
       0	*	*	*	*	*	*	1549	0	0	

R 4    3697	*	*	*	*	*	*	*	910	*	*	*	*	2971	3013	3764	3928	*	*	*	4
       0	*	*	*	*	*	*	1525	0	0	

K 5    2973	*	*	*	*	*	*	*	843	*	*	*	3881	*	4014	3004	*	*	4042	*	5
       0	*	*	*	*	*	*	1490	0	0	

Q 6    *	*	*	3896	*	*	*	*	*	*	*	*	2366	547	*	*	*	4196	*	*	6
       0	*	*	*	*	*	*	1411	0	0	

P 7    4443	*	*	*	3793	*	3260	3363	*	4475	*	*	1094	3267	*	*	3990	*	*	*	7
       0	*	*	*	*	*	*	1413	0	0	

C 8    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1413	0	0	

P 9    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1413	0	0	

Y 10   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	10
       0	*	*	*	*	*	*	1413	0	0	

G 11   3363	*	*	*	*	147	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1413	0	0	

K 12   *	*	*	*	*	*	*	*	237	*	*	*	*	*	2725	*	*	*	*	*	12
       0	*	*	*	*	*	*	1413	0	0	

K 13   *	*	*	*	*	*	*	*	147	*	*	*	*	*	3363	*	*	*	*	*	13
       0	*	*	*	*	*	*	1413	0	0	

C 14   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1413	0	0	

T 15   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	15
       0	*	*	*	*	*	*	1413	0	0	

Y 16   *	*	*	*	3793	*	*	*	*	*	*	*	*	*	*	*	*	*	*	108	16
       0	*	*	*	*	*	*	1413	0	0	

G 17   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1413	0	0	

I 18   *	*	*	*	*	*	2652	2370	4286	*	*	1253	3793	*	*	*	*	3260	*	*	18
       0	*	*	*	*	*	*	1413	0	0	

K 19   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1413	0	0	

C 20   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1413	0	0	

R 21   *	*	*	*	*	*	*	*	228	*	*	*	*	*	2774	*	*	*	*	*	21
       0	*	*	*	*	*	*	1413	0	0	

F 22   *	*	*	*	976	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1024	22
       0	*	*	*	*	*	*	1413	0	0	

F 23   *	*	*	*	3305	*	3516	*	*	*	*	4429	*	*	*	3990	*	*	*	510	23
       0	*	*	*	*	*	*	1413	0	0	

H 24   *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1413	0	0	

P 25   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1413	0	0	

E 26   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1413	0	0	

R 27   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	27
       0	*	*	*	*	*	*	1396	0	0	

P 28   2793	*	*	*	*	1045	*	*	*	*	*	*	1430	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1393	0	0	

S 29   2572	*	*	*	*	*	*	*	*	*	*	1234	*	*	*	1298	*	*	*	*	29
       0	*	*	0	*	*	*	1517	0	0	

//