HHsearch 1.5 NAME c2n1dA_ FAM FILE c2n1dA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2n1dA_.a3m DATE Sat May 30 08:10:42 2015 LENG 54 match states, 54 columns in multiple alignment FILT 15 out of 19 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4518 1.9222 SEQ >ss_dssp CTTCCSCGGGTHHHHHHHTTTTHHHHHHSCCCCCCCCCCCCCCHHHHHHHSTTC >sa_dssp EEEEEEDDADDECCEEAEEEECDEEBDEEEDEEEEEEEEEEDDEEDDEEEEEDE >ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC >ss_conf 943231799999999997642897554057888998521248999999986279 >Consensus xxigrxissxxiWxHLxTmYdlxaLdexExlPFpnxexeFsLPexxxxxxxxxk >c2n1dA_ SNAGRQVPSKVIWDHLSTMYDMQALHESEILPFPNPERNFVLPEEIIQEVREGK >UniRef50_Q16KI1(53-104:197) Mrg-binding protein n=1 Tax=Aedes aegypti RepID=Q16KI1_AEDAE E=3e-13 s/c=1.47 id=42% cov=98% --LNREVTSDMVWSHLRTMYNLKALDDQEQLSLPNDESDFSLPEAEFSSVMKRK >UniRef50_B7QDY7(49-102:384) Mrg-binding protein, putative n=1 Tax=Ixodes scapularis RepID=B7QDY7_IXOSC E=3e-13 s/c=1.41 id=55% cov=94% ASINKEISSQTIWEHLDTMYDMAALHESEILPFPNPENEFVLPDKDFADL---- >UniRef50_B3S4V5(45-91:123) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S4V5_TRIAD E=5e-13 s/c=1.61 id=46% cov=89% ---GENLSVKSVWDHLNTLYDLAALDEMEIYSMPTEEVDFSLPEDYISES---- >UniRef50_UPI000186E52D(52-105:246) MRG-binding protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E52D E=2e-10 s/c=1.24 id=47% cov=91% SLLGKQISSDVLWQHLESMYDLTALDKKETLPFPNEPDEFSLPEDEYS------ >UniRef50_Q7K003(61-113:201) MrgBP n=12 Tax=Drosophila RepID=Q7K003_DROME E=6e-10 s/c=1.23 id=51% cov=83% -SLNREMPSELIWRHLGTMYKLKELDDLESLPFPNEEREFSLPEQ--------- >UniRef50_A7T0Z8(50-97:165) Predicted protein n=2 Tax=Cnidaria RepID=A7T0Z8_NEMVE E=6e-13 s/c=1.56 id=51% cov=91% ----KNISSKQIWDHLHELYNMQALDDLEALPFPNDETDFTLPDEIFESSRK-- >UniRef50_UPI000180D2EE(49-94:148) PREDICTED: similar to MRG-binding protein n=1 Tax=Ciona intestinalis RepID=UPI000180D2EE E=5e-12 s/c=1.57 id=47% cov=87% -SIGQTVSSDQLWQHLSTMYNLKVLDESEVSPFKNIQKEFKLPPSII------- >UniRef50_UPI0000519D04(52-98:247) PREDICTED: similar to MrgBP CG13746-PA n=2 Tax=Apocrita RepID=UPI0000519D04 E=4e-11 s/c=1.47 id=46% cov=85% --IHKDVSLKTIWEHLESMYDLMALDDMEDLPFPSQEIDFSLPEQEF------- >UniRef50_C4Q1C6(45-90:158) MRG-binding protein, putative n=2 Tax=Schistosoma RepID=C4Q1C6_SCHMA E=2e-08 s/c=1.30 id=39% cov=76% ------ISTDDIWKKLGSLYNMEELHDSEVNPFQSKMKEFSLPEEY-------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 2131 * * * * * * * * * * * * 1596 * 1182 * * * * 1 0 * * * * * * 1690 0 0 N 2 * * * * * * * * * 2598 * 1541 * * * 1026 * * * * 2 0 * * * * * * 1945 0 0 A 3 3479 * * * * * * 881 * 1445 * * * * * * * * * * 3 0 * * * * * * 2175 0 0 G 4 * * * * * 706 3290 * * * * 1812 * * * * * * * * 4 0 * * * * * * 2319 0 0 R 5 * * * 3302 * * * * 1470 * * * * 3360 1184 * * * * * 5 0 * * * * * * 2430 0 0 Q 6 * * 3714 1482 * * * * * * * 2568 * 1738 * * 3360 * * * 6 0 * * * * * * 2430 0 0 V 7 * * * * * * * 1272 * 3425 3895 * * * * * * 1232 * * 7 0 * * * * * * 2527 0 0 P 8 * * * * * * * * * * * 3994 3090 * * 521 3021 * * * 8 0 * * * * * * 2527 0 0 S 9 * * * * * * * * * 3862 * * * * * 417 3487 3425 * * 9 0 * * * * * * 2527 0 0 K 10 * * 1382 2890 * * * * 1431 * * * * 4058 * 4308 * * * * 10 0 * * * * * * 2527 0 0 V 11 3885 * 3487 * * * * * 3994 3895 3801 * * 2303 * 3425 2957 2205 * * 11 0 * * * * * * 2527 0 0 I 12 * * * * * * * 876 * 2645 * * * * * * * 1760 * * 12 0 * * * * * * 2527 0 0 W 13 * * * * * * * * * * * * * * * * * * 0 * 13 0 * * * * * * 2527 0 0 D 14 3994 * 1504 2957 * * * * 3487 * * * * 2645 3895 2842 * * * * 14 0 * * * * * * 2527 0 0 H 15 * * * * * * 135 * 3487 * * * * * * * * * * * 15 0 * * * * * * 2527 0 0 L 16 * * * * * * * * * 0 * * * * * * * * * * 16 0 * * * * * * 2527 0 0 S 17 * * 4058 1974 * 2273 3992 * * * * 3425 * * 2842 2448 * * * * 17 0 * * * * * * 2527 0 0 T 18 * * * 3992 * * * * * * * * * * * 2123 499 * * * 18 0 * * * * * * 2527 0 0 M 19 * * * * * * * * * 1457 653 * * * * * * * * * 19 0 * * * * * * 2527 0 0 Y 20 * * * * * * * * * * * * * * * * * * * 0 20 0 * * * * * * 2527 0 0 D 21 * * 1029 * * * * * 3895 * * 1176 * * * * * * * * 21 0 * * * * * * 2527 0 0 M 22 * * * * * * * * * 758 1291 * * * * * * * * * 22 0 * * * * * * 2527 0 0 Q 23 2707 * * 2719 * * * * 1761 * 3862 * * 1946 * * 3805 * * * 23 0 * * * * * * 2527 0 0 A 24 405 * * 2677 * * * * * * * * * * * * * 3500 * * 24 0 * * * * * * 2527 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 2527 0 0 H 26 * * 612 * * * 1531 * * * * * * * * * * * * * 26 0 * * * * * * 2527 0 0 E 27 * * 1475 814 * * * * 3805 * * * * * * * * * * * 27 0 * * * * * * 2527 0 0 S 28 * * * * * * * * 3805 2338 2627 * * 3801 * 1009 * * * * 28 0 * * * * * * 2527 0 0 E 29 * * * 0 * * * * * * * * * * * * * * * * 29 101 3885 * 0 * * * 2527 1000 0 I 30 3992 * 3862 * * * * 1515 * * * * 3885 3801 * 2944 3805 2494 * * 30 0 * * * * * * 2527 0 0 L 31 * * * * * * * 3994 * 740 * 3487 * * * 3500 * 3885 * 3425 31 0 * * * * * * 2527 0 0 P 32 * * * * * * * * * * * * 260 * * 2601 * * * * 32 0 * * * * * * 2527 0 0 F 33 * * * * 260 * * * * 3801 3425 * * * * * * * * * 33 0 * * * * * * 2527 0 0 P 34 * * * * * * * * 3500 * * * 406 3487 * * * 3885 * * 34 0 * * * * * * 2527 0 0 N 35 * * * * * * * * * * * 554 * * * 2148 3425 * * * 35 0 * * * * * * 2527 0 0 P 36 * * 2305 2109 * * * 3500 2831 * * * 3181 3862 * 3219 4308 * * * 36 0 * * * * * * 2527 0 0 E 37 * * * 413 * * * * * * 3487 * 3805 3500 * * * * * * 37 0 * * * * * * 2527 0 0 R 38 * * 3805 * * * * 3862 1811 * * 4058 * * 2574 2842 3992 2791 * * 38 0 * * * * * * 2527 0 0 N 39 * * 1523 981 * * * * * * * 4315 * * * 3394 * * * * 39 0 * * * * * * 2527 0 0 F 40 * * * * 0 * * * * * * * * * * * * * * * 40 0 * * * * * * 2527 0 0 V 41 * 3885 * * * * * * 3500 * * * * * * 828 2993 2691 * * 41 0 * * * * * * 2527 0 0 L 42 * * * * * * * * * 0 * * * * * * * * * * 42 0 * * * * * * 2527 0 0 P 43 * * * * * * * * * * * * 0 * * * * * * * 43 0 * * * * * * 2527 0 0 E 44 * * 2082 680 * * * * * * * * 3500 * * * 4282 * * * 44 0 * * * * * * 2527 0 0 E 45 3801 * 2217 2018 * * * * 4058 * * * * 2878 * 1888 * * * * 45 0 * * * * * * 2527 0 0 I 46 * * 2934 1477 * * * 1657 * * * * * * * * * * * 2376 46 0 * * * * * * 2497 0 0 I 47 * * * * 932 * * 1369 * * * * * * * * * * * 3492 47 0 * * * * * * 2390 0 0 Q 48 3316 * * 3283 * * * * * * * * * 1680 * 1044 * * * * 48 0 * * * * * * 2198 0 0 E 49 * * 2125 1080 * * * * * * * * * * * 1747 * * * * 49 0 * * * * * * 2047 0 0 V 50 * * * * * * * * * 2894 3201 * * * * 1692 * 1161 * * 50 0 * * * * * * 2047 0 0 R 51 * * * * * * * * 2855 * 1385 * * * 1571 * 2813 * * * 51 0 * * * * * * 1817 0 0 E 52 * * * 1260 * * * * 1231 * * * * 2678 * * * * * * 52 0 * * * * * * 1817 0 0 G 53 * * * * * 982 * * * * * * * 2325 1766 * * * * * 53 0 * * * * * * 1695 0 0 K 54 * * * * * * * * 409 * * * * * 2019 * * * * * 54 0 * * 0 * * * 1659 0 0 //