HHsearch 1.5 NAME c2n00A_ FAM FILE c2n00A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2n00A_.a3m DATE Sat May 30 08:10:57 2015 LENG 95 match states, 95 columns in multiple alignment FILT 75 out of 79 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.5 EVD 0.4426 0.1690 SEQ >ss_dssp CHHHHHHHHHHHHHTTSCHHHHHHHHHHHCSSSCCCTTGGGTTTTTHHHHHHHHHTCHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHTSCC >sa_dssp EDCEBCCDBBDCBBEDBEEECCEEBBEDCBEEDEBDEEDCEEACEDCAADCBDEDECBCEAADCABECBCEDCDEEDAEDBCEDDEDADEDDEEE >ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >ss_conf 91389999999998322899999999998316999989963079999999999963968899999999997192899999999999997310369 >Consensus MxxxxxxxxLlxxLexLxxxelkxFKxxLxxxxxixxxxlexadxxxladlmxxxyxxxxaxxxtixilxxinxxdLaexlxxexxkxxxkxxtx >c2n00A_ MESEYREMLLLTGLDHITEEELKRFKYFALTEFQIARSTLDVADRTELADHLIQSAGAASAVTKAINIFQKLNYMHIANALEEKKKEAERKLMTN >UniRef50_Q5F3J4(8-99:734) Putative uncharacterized protein n=4 Tax=Neognathae RepID=Q5F3J4_CHICK E=1e-07 s/c=0.63 id=23% cov=92% --------ILLEALEGLTLEDFQEFKKKLphtdiKGGWNIGRDELEKVThPSSLISYMGDSYREGAAMDIAISLFEEMNQRDLAEKILDEKVKEYKQKYT - >UniRef50_Q9I9N6(1-94:203) Apoptosis-associated speck-like protein containing a CARD n=6 Tax=Danio rerio RepID=ASC_DANRE E=2e-07 s/c=0.61 id=21% cov=96% MAESFKEH-LQEAFEDLGADNLRKFKSKLGDrrqEPRVTKSAIEKlKDEIDLADLMVGVFTSKDAVSVTVEILRAIKCNAVADDLLRNTGQSESK---- >UniRef50_UPI00006A16E0(6-72:192) UPI00006A16E0 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A16E0 E=0.0008 s/c=0.67 id=26% cov=53% ------EALLEKTLMNLPSSSFKSFKNKLIGYKKITVHDLELAGREEVVTKIIRC---------------------------------------- >UniRef50_Q86W25(13-107:1043) NACHT, LRR and PYD domains-containing protein 13 n=6 Tax=Eutheria RepID=NAL13_HUMAN E=8e-13 s/c=0.79 id=24% cov=58% ---------------------------------RIPWANLRAADPLNLSFLLDEHFPKGQAWKVVLGIFQTMNLTSLCEKVRAEMKE-------- >UniRef50_Q66X01(8-98:1004) NACHT, LRR and PYD domains-containing protein 9C n=14 Tax=Murinae RepID=NAL9C_MOUSE E=6e-12 s/c=0.79 id=17% cov=86% ---------LLQYFQKLSDEEFQRFKELLQKEqekfklKPLSWTKIKNTSKEDLVTQLYTHYP-RQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNK--- - >UniRef50_UPI00004D866F(2-89:197) Apoptosis-associated speck-like protein containing a CARD (hASC) (PYD and CARD domain containing protein) (Target of methylation-induced silencing 1) (Caspase recruitment domain protein 5). n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004D866F E=1e-08 s/c=0.69 id=23% cov=56% ---------------------------------RIPMGSLQGADGGKVADLIIDYYKNSYGVKVTLGVLGAIGAKSAATHLEKIK---------- >UniRef50_UPI0000F20BBF(151-233:761) PREDICTED: similar to novel NACHT domain containing protein n=1 Tax=Danio rerio RepID=UPI0000F20BBF E=4e-08 s/c=0.72 id=23% cov=74% -------------LKKLAQDELKVFKKLLWDRYPERfRDPLDGLDIVDLVDKMLELCDIEVSMKITLAILHFLNLKKLSEYLQ------------- >UniRef50_Q05CU9(1-95:310) MNDA protein (Fragment) n=1 Tax=Homo sapiens RepID=Q05CU9_HUMAN E=3e-15 s/c=0.87 id=18% cov=100% MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMpSLKNLVNNLRKEKSKVAKKIKT- >UniRef50_UPI0000D9A4C7(8-92:139) PREDICTED: NACHT, leucine rich repeat and PYD containing 2 n=1 Tax=Macaca mulatta RepID=UPI0000D9A4C7 E=2e-08 s/c=0.71 id=25% cov=77% -------------LEQLSQDELSKFKSLirkisLGKELQtVPQMEVDKANGKQLVEIFTSHSYSYWAGMAAIQGFEKMNETHLSERADERR--------- - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 4209 0 0 E 2 2233 * * 1477 * 3803 * * 5038 * * 4312 * * * 5723 4160 2317 * * 2 0 * * * * * * 4585 0 0 S 3 * * * 4204 * 5155 * * 2746 * * 1879 * * 5084 1304 4007 * * * 3 0 * * * * * * 4612 0 0 E 4 * * 3515 1850 2777 * * * 2867 * * * 4234 4021 * 4219 2677 * * 5186 4 0 * * * * * * 4606 0 0 Y 5 * * * * 1584 * * * 4528 2518 * * * 4234 * 5054 * * * 1453 5 0 * * * * * * 4606 0 0 R 6 * * * * * 4335 * * 1180 4234 * * * * 2513 2777 3767 4021 * * 6 0 * * * * * * 4606 0 0 E 7 * * 2216 1314 * * * * 3242 * * 2837 * 5224 3181 * * * * * 7 44 * 5063 * * * * 4683 0 0 M 8 4639 3998 * * 2809 * 4313 1220 * * 4033 4805 * * * 4488 * 3656 4203 * 8 142 * 3415 * * 0 * 4680 0 1000 L 9 * * 5431 * * 3030 * 3383 * 1213 4817 * * * * * 4654 1988 * * 9 0 * * * * 983 1018 4915 0 1661 L 10 * * * * * * * 5603 * 86 4757 * * * * * * * * * 10 40 * 5199 * * 0 * 5414 0 1000 L 11 * * * 5834 5408 * * 4974 3530 836 4047 * * 4165 5204 4941 4094 4450 * * 11 0 * * * * 0 * 5368 0 1000 T 12 4565 * 3042 4674 * 5781 * 5948 2230 4419 * 3666 * 4008 5843 3109 3295 5623 3233 * 12 58 * 4664 * * * * 5413 0 0 G 13 3698 * * * * 1740 * 4570 * 4698 5450 * * * * 3512 2925 3344 * 2306 13 0 * * * * 0 * 5378 0 1503 L 14 * * * * 3215 * * * * 164 * * * * * * * * * * 14 0 * * * * * * 5726 0 0 D 15 * * 2657 779 * 5911 * * 4327 * 5180 * * 3649 5567 5085 * 5843 * 5868 15 0 * * * * * * 5726 0 0 H 16 5633 5073 2680 1882 5808 3888 3901 * 3474 5789 * 3554 4803 3883 4874 * * 5313 * 6117 16 0 * * * * * * 5765 0 0 I 17 * * * * * * * 2557 * 491 3357 * * * * * * 5580 * * 17 0 * * * * * * 5765 0 0 T 18 5415 * 2893 4196 5699 3507 * 5513 4332 4671 * 2257 6139 5447 4751 2768 4040 3672 * * 18 0 * * * * * * 5775 0 0 E 19 4236 * 2237 2083 * 5656 5700 * 2429 5809 * 5453 4957 3034 4735 4589 * * * * 19 0 * * * * * * 5797 0 0 E 20 3172 * 2678 1788 * 6351 4023 * 4254 5771 * 4942 * * 6373 4486 5661 4725 * 2718 20 0 * * * * * * 5803 0 0 E 21 6619 6166 2938 899 * * 3038 * 6434 * * 4722 * 3723 5065 6157 5770 * * * 21 0 * * * * * * 5803 0 0 L 22 * * * * 1064 * * * * 985 * * * * * * * 5900 * * 22 0 * * * * * * 5803 0 0 K 23 * * 6182 3254 * * * 5772 1537 * 6698 4082 * 2941 2711 3152 4979 * 5456 * 23 0 * * * * * * 5803 0 0 R 24 6222 * 5451 3538 * * * 4036 1800 4778 4324 5661 * 4726 2354 4184 3159 5439 * * 24 0 * * * * * * 5803 0 0 F 25 * * * * 256 * * 3801 * 5086 * * * * * * * 4021 * * 25 0 * * * * * * 5803 0 0 K 26 * 5771 * * * * * * 369 * * 5793 * 3065 4522 * 5253 * * * 26 24 5943 * 2807 222 * * 5803 1000 0 Y 27 5616 * * 3323 2968 * 5906 * 4285 3299 6089 6157 * 5108 3504 1978 * * 2827 4583 27 0 * * * * * * 5803 0 0 F 28 * 6534 * * 3497 * 4205 * 2692 1272 * 5770 * 3555 4780 * 5661 6344 * 3244 28 45 5017 * 2322 322 * * 5803 1267 0 A 29 5137 * * * 4855 * * 5722 * 123 * * * * * * * * * * 29 94 3982 * 2198 355 * * 5803 2619 0 L 30 2758 5169 * 4576 * 5060 * 4621 2252 3320 5102 5052 * 4063 3546 3337 6434 6417 4003 6322 30 119 3659 * 2457 290 * * 5803 2780 0 T 31 5128 * 2671 3305 * 3326 3936 6301 2904 * 6207 2636 * 3550 4262 7125 3933 * * 5848 31 215 2852 * 2017 409 * * 5803 3261 0 E 32 * * 2073 1701 5091 3491 2918 5924 5129 * 5160 * 5567 5962 5439 5981 * * * 4180 32 232 2752 * 2513 278 * * 5803 3275 0 F 33 * 4071 * * 3553 4604 5690 * 3049 1959 * 4570 2380 4854 4956 4359 * 5253 5819 5439 33 271 2547 * 2513 278 * * 5803 3769 0 Q 34 * * * * * 4316 6201 * 2150 4523 * 4193 2292 3530 2767 2686 * 5669 * * 34 89 4063 * 893 1115 * * 5837 2328 0 I 35 * 6396 * 5471 5644 * * 1162 * 1867 4061 6078 * * * 5950 4596 3435 * * 35 0 * * * * * * 5853 0 0 A 36 4543 * * 4829 * 5101 * * * * 5519 3740 1232 6144 3692 3016 2686 * * * 36 33 5471 * 0 * * * 5853 1000 0 R 37 4428 * * 6137 * * 6297 5833 2759 4576 6375 * 5037 4117 1522 4884 5038 6225 2370 * 37 50 * 4882 * * * * 5853 0 0 S 38 3767 6211 2949 * 5229 1925 5523 5592 3051 5666 5865 4262 * * * 2940 3453 5656 * * 38 18 6325 * 2585 263 967 1034 5813 1000 1638 T 39 5239 * 4908 2256 * * 6632 6512 3068 6491 3053 3772 4894 2708 3319 5419 4069 5971 * * 39 0 * * * * 0 * 5814 0 1000 L 40 * * * * * * * 3768 * 1179 4089 * * 2741 5124 * 5036 2201 * * 40 24 5950 * 2000 415 * * 5853 1000 0 D 41 * * 2434 938 * * 4165 6620 2869 * * 5168 * 4292 6468 * * * * * 41 0 * * * * * * 5853 0 0 V 42 5249 * 3896 3183 5750 3972 * 6201 1817 4936 5582 2796 4962 4181 4463 4562 5041 6171 * * 42 34 5410 * 0 * * * 5853 1217 0 A 43 894 * * * * 5293 * * 3601 3766 6620 * * * * 4427 5141 5857 * 2488 43 28 5684 * 0 * * * 5853 1000 0 D 44 * * 1148 * * 3924 6440 5996 5579 * * 2845 * 5604 4301 2627 3999 * * * 44 25 5857 * 0 * * * 5853 1000 0 R 45 4814 5487 * 4772 5844 3058 6127 5471 3455 * * * 2568 * 1412 * 5154 4822 5878 6054 45 0 * * * * * * 5853 0 0 T 46 4784 * 5345 3181 * 5454 5833 2196 3450 3541 5950 * * 4348 5750 4768 3513 2437 * * 46 0 * * * * * * 5853 0 0 E 47 * 5975 1544 2535 * * * * 2367 * * 4746 * 2639 * 4343 5990 6376 * * 47 0 * * * * * * 5853 0 0 L 48 * * * * * * * 2276 * 1014 5605 * * * * * 3196 2566 * * 48 0 * * * * * * 5853 0 0 A 49 780 * 5791 * * * * 5857 * 6058 * * * * * 5489 4514 1731 * * 49 0 * * * * * * 5853 0 0 D 50 * * 1253 2761 6468 * 5170 * 5638 5975 * 3353 * 5488 5267 3120 3369 * * * 50 0 * * * * * * 5853 0 0 H 51 * 4841 * * * * 5279 3524 3386 881 4420 * * 4172 * 6343 5957 5181 6583 4471 51 0 * * * * * * 5853 0 0 L 52 * * * * 5897 * * 3856 * 1178 1138 * * 5791 * * * * * * 52 0 * * * * * * 5853 0 0 I 53 6001 * 5557 2409 * 5853 4802 2197 5029 3322 6088 6287 * * * 5211 3808 2093 * 6305 53 0 * * * * * * 5859 0 0 Q 54 4406 * 3190 2058 * 4284 * * 2899 5163 * 5379 * 2824 5374 3137 3528 * * * 54 0 * * * * * * 5859 0 0 S 55 4905 4305 * * 4042 * 2053 * 2621 4711 6054 6243 * 4022 5087 3651 3909 6308 * 2882 55 0 * * * * * * 5859 0 0 A 56 4602 3150 * * 1476 * * * * 5447 * 5994 * * * 5094 * * * 1255 56 0 * * * * * * 5774 0 0 G 57 6059 * 4293 5759 * 1452 * * 4485 * * 5019 1999 5824 3699 3678 4834 * * 5915 57 18 * 6297 * * * * 5774 0 0 A 58 3423 5440 5125 1460 * 2596 * 5412 3917 * 5951 6303 3629 5348 * 3461 6444 * * * 58 0 * * * * 0 * 5764 0 1000 A 59 3640 * 2452 2664 * 4450 * * 2637 * * 4929 4190 3689 4521 3724 6059 4505 * 5093 59 73 * 4343 * * * * 5774 0 0 S 60 2365 * 5153 4126 * 2911 * * 4714 4326 * 5648 5865 3662 3730 3318 * 5351 3926 3089 60 0 * * * * 0 * 5961 0 2319 A 61 642 3784 * * 5447 2920 * 4381 * * * * * * * 5419 5645 4630 * * 61 0 * * * * * * 5774 0 0 V 62 4647 * * 6292 * 4223 * 6055 5588 2427 3572 * * * 6285 * * 1632 1985 * 62 0 * * * * * * 5758 0 0 T 63 4429 * 2156 3623 * 3803 * * 2376 * 3811 3295 * 5191 3881 4124 4529 6089 * * 63 0 * * * * * * 5758 0 0 K 64 3691 * * 6065 * * * 2501 2312 3863 3532 * * 6247 * * 4461 1662 * * 64 0 * * * * * * 5758 0 0 A 65 2027 * * * 5422 * * * * 2484 6271 * 5643 * * 4664 1285 3841 * * 65 0 * * * * * * 5758 0 0 I 66 5985 * * * 5018 * * 1615 5625 1664 * * * 5850 4403 5927 * 2251 * * 66 0 * * * * * * 5758 0 0 N 67 4512 * 3052 2341 * 4644 5850 * 2603 * * 3330 * 3137 3967 3455 5837 * 5991 6071 67 0 * * * * * * 5758 0 0 I 68 6271 5595 * * 5058 4952 * 1150 * 2447 * * * * * * 3862 2312 * * 68 0 * * * * * * 5758 0 0 F 69 5816 3973 * * 1575 * * * * 1066 * * * 5837 * * * 5189 4933 5175 69 0 * * * * * * 5758 0 0 Q 70 4432 * * 1627 * 4889 4825 * 2311 4372 * * * 3429 2297 * * * * 6089 70 0 * * * * * * 5758 0 0 K 71 2932 * 4130 3626 5408 5334 6570 4752 1756 * * 3607 * 3165 4526 4220 4942 5996 * * 71 0 * * * * * * 5758 0 0 L 72 6001 * * * * * * 1335 5643 3255 1437 * * * * * 4713 4166 * * 72 193 3001 * 0 * * * 5758 2092 0 N 73 5032 * 3409 4875 * 3229 4702 * 3408 * * 1018 6158 5980 6009 4291 6416 * * * 73 48 5760 6113 1000 1000 * * 5760 1000 0 Y 74 5096 3827 * 4389 * * 5569 4908 5589 1527 6147 * * 2206 2685 * * * * 4502 74 22 6018 * 0 * * 0 5726 1000 1000 M 75 * * 6154 4636 * 4936 5654 5776 2190 5807 3782 2018 * 5399 2387 5615 4039 5486 * * 75 0 * * * * 0 * 5726 0 1000 H 76 4454 * 1303 2683 * 6159 3999 * 3536 4296 * 4493 5664 4731 * 4045 5846 * * * 76 0 * * * * * * 5731 0 0 I 77 6282 * 5756 * * * 6037 4129 * 472 * * * * 4136 * 5404 3399 * * 77 0 * * * * * * 5731 0 0 A 78 841 3497 * * * * 6034 5565 * * 6359 * * * * 2736 * 3333 4695 5912 78 0 * * * * * * 5741 0 0 N 79 4361 * 3171 1049 * 4975 * 5177 2883 5930 * 3957 * * 6119 * 4220 6231 * * 79 0 * * * * * * 5741 0 0 A 80 5056 * 6248 2861 * 5554 4926 4994 2108 5364 4037 4406 6099 3653 2507 * 4067 6034 * 5369 80 21 6094 * 1585 585 * * 5739 1000 0 L 81 2231 * * * 4778 6189 * 5561 * 652 * * * * * * 5905 4692 * 5394 81 26 * 5822 * * * * 5760 0 0 E 82 5672 * 5456 2127 * * 5909 * 2358 3934 * * * 2382 2341 * 6009 4412 * * 82 0 * * * * * 0 5953 0 1000 E 83 5844 * 3597 1937 * * 5773 5887 1957 * * 2930 * 5645 2824 5690 4869 * * * 83 0 * * * * * 0 5878 0 1000 K 84 4384 * 3933 1354 5908 4774 * 5708 2700 * * 3537 * 4135 3909 5579 5940 5490 * * 84 0 * * * * * 0 5872 0 1000 K 85 5376 * * 5312 * * 6165 3294 1494 3647 3542 * * 5836 3226 * 4088 4457 5418 4013 85 0 * * * * * 0 5836 0 1000 K 86 5014 * * 2386 * 4728 * 5249 2161 3077 * 5220 5238 4401 2709 3499 * 5077 * * 86 0 * * * * 0 * 5745 0 1000 E 87 4262 * 5313 1740 * * 5478 * 1343 * * * * 2467 5271 * * * * * 87 50 4890 * 1000 1000 * * 5683 1000 0 A 88 1996 * * 4709 * 2470 * 4796 3945 4852 * * * * * 4111 * 1568 * * 88 0 * * * * * * 5245 0 0 E 89 4691 * 3175 2445 * * * 3142 3908 2688 3868 * * 2684 * * * 4149 * 4285 89 0 * * * * * * 4978 0 0 R 90 4357 * 4168 5029 * * * * 2648 4049 * 2290 * * 2559 2151 4446 * * * 90 0 * * * * * * 4782 0 0 K 91 4422 * * * * * * * 987 * * * 4168 2546 3126 3778 4854 * * * 91 0 * * * * * * 4782 0 0 L 92 * * * * * 3664 * 3679 1685 2211 * * 3144 * 2301 * * * * * 92 0 * * * * * * 4057 0 0 M 93 * * * * * * * * 2690 3178 1860 * * 2040 * * * 3298 * 3130 93 0 * * * * * * 3750 0 0 T 94 * * * 3206 * * * * * * * * * * * 2143 588 * * * 94 0 * * * * * * 3750 0 0 N 95 * * * * * * * * * * * 0 * * * * * * * * 95 0 * * 0 * * * 2554 0 0 //