HHsearch 1.5 NAME c2mzoA_ FAM FILE c2mzoA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mzoA_.a3m DATE Thu Feb 9 14:19:55 2017 LENG 81 match states, 81 columns in multiple alignment FILT 103 out of 183 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.8 EVD 0.4535 0.7745 SEQ >ss_dssp CCCHHHHHHHHTTTSCTTTCCSSHHHHHHHHHHHTTCCCCHHHHTTTTHHHHHHHHHHHCCCTTHHHHHHHTGGGTTTTCC >sa_dssp ECCADEBDEDACEAADEEBCCEECEBACDAACBADECEBEDDCADECEABEBADDADEDCEAEDACECADEBAEDBEEEBE >ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC >ss_conf 978899999999973254676679999999999530889999998678117889864268998999999999999999619 >Consensus xxxvxxlkxrLxxxlxxxxxxxxxxxilxxLxxLxxxxitxexLkxTxIGkxVnxLrKxxxxxxvxxxAkxLvxkWKxxvd >c2mzoA_ PASPQQIRDRLLQAIDPQSNIRNMVAVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE >UniRef50_D1IWZ8(83-148:943) Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1IWZ8_VITVI E=0.0001 s/c=0.72 id=22% cov=78% ---------------EDNIDCSVEESITSLLGALEKLPIDQECSKSSGIEVTVKNLFGH-KSSRVVDRAKALYHSWNK--- >UniRef50_Q4SYN9(68-139:884) Chromosome undetermined SCAF11998, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4SYN9_TETNG E=3e-10 s/c=0.92 id=25% cov=89% ---------RLLNSwLTHSKSTSNAPMLQLILLTLQNLPLRVEHLKQNNTAKLVKQLSKSAENEDLRNLASELVDGWMAII- >UniRef50_Q4N8B9(3-82:324) Transcription elongation factor SII, putative n=1 Tax=Theileria parva RepID=Q4N8B9_THEPA E=4e-08 s/c=0.74 id=23% cov=95% --NILELKRRIDQIINSLSNGSYNQATEGILCELESLSIDRDVLQSTRIGSSLTKLSKllAPHSKEHSQRLITLINNWKN--- >UniRef50_Q18181(7-82:542) Putative uncharacterized protein n=5 Tax=Caenorhabditis RepID=Q18181_CAEEL E=2e-07 s/c=0.75 id=23% cov=93% --NVEEIKKRLQIAAEND----DQTLCESLLNEVRPLVTSREILEETRIGFVVNQLRRQyfKKWPALLRISREVIKSWSEIV- >UniRef50_Q5N7E5(131-198:390) Putative uncharacterized protein P0581F09.4 n=2 Tax=Oryza sativa RepID=Q5N7E5_ORYSJ E=9e-07 s/c=0.81 id=13% cov=74% -----------------NYKEQSVDTLFDGLRRLQLMRLSISVLKSTQIAEAVAPLNKH-RSPVICKIARDLAKGWK---- >UniRef50_B7ZS93(3-80:645) Transcription elongation factor XSII-K1 n=5 Tax=Xenopus laevis RepID=B7ZS93_XENLA E=2e-11 s/c=0.90 id=22% cov=94% ------LEEELLKIgrrLERRFSEGNTDRILELLKELQAIEVNVTLLRSTRVGVTVNKIKKKSDERKVIELATAIIKDWKKIFE >UniRef50_D0P2F2(435-510:638) Putative uncharacterized protein n=3 Tax=Phytophthora infestans T30-4 RepID=D0P2F2_PHYIN E=1e-07 s/c=0.75 id=22% cov=91% ------IVKKWIQPLD-DGTLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMVLMKHPqETPENKELCRSLVERWSRAV- >UniRef50_Q586Y0(265-339:381) Putative uncharacterized protein n=2 Tax=Trypanosoma brucei RepID=Q586Y0_9TRYP E=4e-06 s/c=0.70 id=16% cov=90% ----KELTETYMECLNGDvveVSIANEERIVSLLSSLASANVTLKQLIGTKIGVAVGQFLSDGFPPHIVRFSKGILDYW----- >UniRef50_A8PGK9(81-160:490) Predicted protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8PGK9_COPC7 E=6e-10 s/c=0.82 id=20% cov=99% PAAV-EITREWLKAAAKGEKPNLEETIMPLLHVIDRLPFTLETLTASKIGKVVRYINKETAfSPAIKDMASNLESRWRQML- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2103 0 0 A 2 266 * * * * * * * * * * * 2570 * * * * * * * 2 0 * * * * * * 3097 0 0 S 3 2980 * * * * * * * * * * 2145 * * 2414 2485 1833 * * * 3 0 * * * * * * 3951 0 0 P 4 * * * * * * * 2377 * * * * 3985 * * * * 426 * * 4 130 * 3541 * * * * 4420 0 0 Q 5 * * * 2664 * * * * 3236 1972 * * * 2165 4222 4020 4439 3367 * * 5 0 * * * * 0 * 4729 0 1000 Q 6 * * 3603 1396 * * * * 2774 * * * * 1899 3765 * 4331 * * * 6 0 * * * * * * 4972 0 0 I 7 * * * * * * * 1161 * 1098 4473 * * * * * 4628 * * * 7 0 * * * * * * 5251 0 0 R 8 * * * 4997 * * 5099 * 1171 * * * * 3201 3547 * 2226 3516 * * 8 0 * * * * * * 5367 0 0 D 9 * * 2642 1769 * 4949 4164 * 2499 * * 5082 * * 3103 3455 4498 * * * 9 47 * 4963 * * * * 5414 0 0 R 10 5318 * 5113 3433 5224 * 3056 * 2627 * * * * 5506 1229 4883 5026 4995 * * 10 0 * * * * 0 * 5755 0 1000 L 11 * 5196 * * 5750 * * 3798 * 525 5394 * * * * * * 5285 3180 5179 11 33 * 5488 * * * * 5808 0 0 L 12 3960 * 4917 3097 5590 * * 4725 4401 1675 5156 * * 3155 4877 3027 * 3843 * * 12 138 * 3450 * * * 0 5783 0 1000 Q 13 4530 * * 3529 * * 5162 4845 1690 * * 3733 * 2365 2934 3915 5020 * * * 13 0 * * * * * 0 5745 0 2563 A 14 2473 4159 * 4422 5617 * * 2224 3922 3579 4254 * 4026 5130 5895 2978 * 4407 * * 14 120 4065 5617 969 1032 * 0 5765 1710 2563 I 15 3210 * 5516 * * * * 2806 4243 902 5834 * * 5120 * 5493 * 3820 * * 15 29 5629 * 2322 322 1471 645 5783 1000 2716 D 16 3991 * 1477 2561 * * * * 5542 5128 * 2949 4531 4634 5221 3952 4216 * * * 16 50 * 4885 * * 1763 503 5868 0 2094 P 17 5863 * 4046 4805 * 3962 4948 5606 1985 5521 * 3605 2694 4021 4086 3708 4551 5742 * * 17 0 * * * * 795 1239 5940 0 2287 Q 18 4183 * 1993 3288 5737 4406 * * 5388 3600 4683 3129 5604 5056 4529 3953 3562 * * 5459 18 163 5690 3513 1585 585 959 1042 6092 1000 1464 S 19 4110 5720 5521 4148 4600 2937 * 3995 3777 * * 6042 * 3948 4650 2108 5468 3929 * 3358 19 34 5435 * 0 * 1653 552 6034 1000 2760 N 20 5852 * 1638 5561 * 4736 * * 3796 * * 2825 5977 5073 * 2324 2975 * * 5877 20 29 * 5635 * * 1895 452 6074 0 2260 I 21 4284 5404 4199 3138 * 4382 * 3572 3544 3325 * 3766 5052 6086 4527 3916 3923 2781 * * 21 0 * * * * 2104 382 6099 0 2369 R 22 3511 * 4902 * * 4948 * 4098 3864 4458 * 4304 3440 4745 5009 1686 3112 4782 * * 22 51 5691 6038 1000 1000 1484 638 6093 1000 2094 N 23 * * 1953 3846 * 6252 * 6256 5666 5341 * 1629 * 6485 * 3320 3605 4046 * 5356 23 23 5975 * 2000 415 1511 623 6024 1000 1919 M 24 4151 * 4578 2368 5843 6285 5108 5143 4480 4766 3405 4291 5823 4307 * 3532 4657 2629 5755 5717 24 36 6435 6245 1000 1000 963 1038 6036 1000 1563 V 25 4624 * 2625 1505 * 4897 5318 * 4599 5302 * 4352 4005 4388 5439 3396 5514 5579 * * 25 0 * * * * * 0 6010 0 1571 A 26 2421 * 4124 3828 4628 4830 * 5152 3532 2997 5044 5522 6629 6283 3951 3538 3921 3933 * 6292 26 31 6544 6531 0 * 1142 871 5992 1000 1571 V 27 3673 4898 * * * * * 1642 * 2362 5279 * * * 4558 * 5581 1815 * * 27 0 * * * * 0 * 5963 0 1615 L 28 * 5169 * 4230 4261 * 6484 3151 5483 1223 3954 * 6437 5247 5495 * 4080 3388 * 6269 28 20 7147 7281 1000 1000 * * 5899 1000 0 E 29 3201 * 2284 2001 * 4835 5177 * 3256 6326 * 6523 5119 6241 5272 2968 5610 5099 * * 29 16 6474 * 1585 585 * 0 5950 1000 1000 V 30 3436 3712 6608 * * 6110 * 2241 * 1560 5259 * 6782 * * 5791 5092 2805 * 5042 30 0 * * * * * 0 5949 0 1000 I 31 * * * * 4717 * * 2939 * 317 5116 * * * * * * * * * 31 0 * * * * 0 * 5985 0 1000 S 32 6453 4767 4520 3554 * 3241 4823 6666 2266 6375 * 4326 * 3714 2529 3673 3748 * * * 32 0 * * * * * * 5981 0 0 S 33 2828 5511 5592 3054 * 5788 5200 4565 3530 3437 5296 5259 * 3783 3424 4265 3981 3521 * 6685 33 0 * * * * * * 5981 0 0 L 34 6746 * * * 6144 * * 5902 * 168 6446 * * * * * * 4534 * 6026 34 0 * * * * * * 5991 0 0 E 35 3992 * 2508 2158 * 4601 5431 * 2697 4152 * 5797 * 3508 3959 4014 5695 * * 6520 35 0 * * * * * * 5991 0 0 K 36 3674 * 3605 4808 * 5627 * 5205 2106 4107 6690 3484 5848 4590 3126 3073 4718 5546 * 6022 36 48 4935 * 340 2251 * * 5991 2091 0 Y 37 5434 5240 * 5978 3628 * * 3466 5375 1561 3102 * 6526 * 4859 5487 3987 2876 * 5897 37 17 6456 * 0 * * * 5991 1000 0 P 38 5075 6446 3404 3442 6614 5401 * 5993 4276 6738 6744 4453 1363 5572 5618 4382 4735 3455 * * 38 13 6790 * 0 * * * 5991 1000 0 I 39 7119 * * * 5902 * * 1629 * 3717 2335 * 4124 * * * 5848 1719 * * 39 11 7055 * 0 * * * 5991 1000 0 T 40 * * 2446 * 6179 * * * 6520 * 6465 3550 6916 * 4662 2350 1149 * * * 40 0 * * * * * * 5991 0 0 K 41 4648 6456 * 4231 4798 * * 3894 3011 1992 4586 * * 5811 3387 4576 4616 2699 * 5320 41 12 6890 * 2585 263 * * 5991 1000 0 E 42 4380 * 1989 1422 * * 4998 5816 3838 * * 5033 * 4170 6105 4202 5802 5487 * 6311 42 0 * * * * * * 5991 0 0 A 43 3860 5811 4777 6456 * * 4031 2076 6382 2600 5659 6584 * 3239 4112 * 3784 3016 * * 43 0 * * * * * * 5991 0 0 L 44 * * * * * * * 4926 * 95 * * * * * 5033 * * * * 44 0 * * * * * * 5991 0 0 E 45 5254 * * 3105 * * * 4954 1441 5115 * 6515 * 2360 3542 5747 3839 4380 * * 45 0 * * * * * * 5991 0 0 E 46 3308 * 4397 2606 * 5196 6275 6368 3016 6576 5273 4819 * 3306 3880 2438 3685 6908 * * 46 0 * * * * * * 5990 0 0 T 47 * 4905 * * * 5634 * * * * * 3566 * * * 2452 558 * * * 47 21 6132 * 0 * * * 5990 1000 0 R 48 * * 4609 5470 * 2268 * * 2501 4726 4328 2844 * 3849 2418 4225 * 6027 * * 48 0 * * * * * * 5990 0 0 L 49 5005 5403 * * 6132 6145 * 847 * 3337 6970 * * * * * 4498 2255 * * 49 0 * * * * * * 5990 0 0 G 50 3409 * 6471 5813 * 404 * * * * * * 3786 * * * * 5373 5344 * 50 0 * * * * * * 5990 0 0 K 51 5090 * * 6178 5850 5375 4644 3864 1093 5209 5000 * * 5195 3279 6138 * 2980 * 6902 51 0 * * * * * * 5990 0 0 L 52 2392 * * 5144 5318 * 5299 3677 5772 3071 5598 * 5562 * 5434 3470 2794 2439 * 4993 52 0 * * * * * * 5990 0 0 I 53 * * * * * * * 2755 * 2747 5489 * * * * * * 555 * * 53 0 * * * * * * 5990 0 0 N 54 5429 * * * * 3660 * * 2765 * 5003 1043 * 5826 4160 4155 3828 6656 * 5373 54 25 6858 6898 3170 170 * * 5990 1000 0 D 55 4881 * 5248 6869 6887 4190 4636 6255 1746 5588 6678 3510 5465 3266 3393 3492 5185 4972 * 5152 55 18 6347 * 0 * 0 * 5986 1000 1000 V 56 6340 * * * 3697 * * 3305 * 589 4707 * * * * 6368 * 3569 * 6633 56 37 7161 5764 0 * * * 5990 1000 0 R 57 4885 4633 * * 5199 * * * 3574 4101 5402 4977 * * 1226 2753 3916 4448 6256 * 57 0 * * * * 0 * 5987 0 1677 K 58 5829 * 5344 6471 * 4848 5826 * 692 * * 5397 * 5201 2847 3987 5488 * * * 58 103 5285 4526 1309 746 * * 5990 1648 0 K 59 4019 * 4481 5279 * * 1281 * 3095 5470 6591 5575 * 4526 3534 3953 4182 * * 4801 59 364 4629 2452 2353 314 301 2408 5957 2144 2784 T 60 3047 3508 3981 6468 4703 3971 4673 5864 5652 6281 * 6407 3136 6056 5611 2449 3034 4085 * * 60 216 4219 3555 335 2271 306 2387 5919 2256 4025 K 61 4434 * 2912 2596 5437 3356 6000 6074 2555 6760 * 5332 4223 * 4797 3099 3795 5528 * * 61 185 4054 4061 1392 692 402 2040 5954 2560 3703 N 62 5170 5372 1896 4085 * * 5961 * 6777 6258 * 2049 6206 * * 2390 3646 4722 5758 * 62 149 6549 3515 1000 1000 545 1669 5988 1000 3187 E 63 5641 * 3803 2108 * 4191 * 4318 3080 5401 * * 2183 5475 5153 4255 3587 5428 * * 63 45 * 5033 * * 430 1955 5927 0 3609 E 64 3780 * 3700 1857 * 4132 5194 6422 3179 * 6316 5064 4450 3224 3939 4170 6619 4582 * * 64 11 * 7057 * * 0 * 5957 0 2713 L 65 4235 6258 * * * * 6128 1769 * 3415 * 4976 * * * * 5675 1083 * 6813 65 33 6441 6457 0 * * 0 5983 1000 1000 A 66 3156 5397 * * * 3989 * 4869 2144 5822 * 6793 * 2611 2816 2998 6313 3824 * * 66 0 * * * * 973 1027 5950 0 1622 K 67 3884 * 2764 3508 * 4963 * 5553 2488 5517 * 4162 * 4058 3266 2860 3688 * * 6879 67 0 * * * * * 0 5975 0 1000 R 68 3244 * * * 5178 * * 4196 3556 1584 5088 4729 * 4468 2842 3978 5450 4484 * 6511 68 0 * * * * 0 * 5975 0 1000 A 69 400 5532 * * * 4898 * 5822 * 5666 * * * * * 3136 * 4811 * * 69 0 * * * * * * 5980 0 0 K 70 4120 * 5438 * * 5084 6304 5394 1269 6819 6128 6615 * 3517 2546 3607 4349 6011 * * 70 0 * * * * * * 5980 0 0 K 71 2824 * 3894 2568 * 4732 7024 * 3233 5283 * 3405 * 3749 4588 2542 4290 6344 * * 71 0 * * * * * * 5980 0 0 L 72 6382 * * * * * * 2694 * 402 5249 * * * * * * 4317 * * 72 0 * * * * * * 5980 0 0 L 73 5423 * * 5882 4848 * * 1908 5265 2641 5325 * * * 6304 * 5604 1412 * 4709 73 0 * * * * * * 5980 0 0 R 74 4240 6685 3032 2564 * 4553 4799 6566 1598 * * 4678 * 4223 4391 4159 5038 * * * 74 0 * * * * * * 5980 0 0 S 75 4328 * 3939 5060 * 4856 7122 6717 1292 6650 * 5639 * 3578 3694 3224 3898 6615 * 5635 75 0 * * * * * * 5980 0 0 W 76 * * * * * * * * * * * * * * * * * * 0 * 76 0 * * * * * * 5980 0 0 Q 77 * * * * * * * 6267 654 4285 5474 5703 * 4025 3024 4391 6384 6090 * * 77 0 * * * * * * 5951 0 0 K 78 3405 * 3100 3362 * 5390 5647 * 1645 6506 * 3018 * 3756 3901 6025 5780 5695 * * 78 0 * * * * * * 5890 0 0 L 79 4017 5799 6162 6059 4075 * * 2125 5761 2319 2655 * * 4633 4994 * 4768 3099 * * 79 0 * * * * * * 5793 0 0 I 80 * * * * 6160 * * 1867 * 3327 5115 * * * 4795 * 5820 917 * * 80 0 * * * * * * 5672 0 0 E 81 * * 879 1320 * * * * * * * * * 4162 * * * * * * 81 0 * * 0 * * * 4282 0 0 //