HHsearch 1.5 NAME c2mwtA_ FAM FILE c2mwtA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mwtA_.a3m DATE Sat Nov 7 08:14:11 2015 LENG 34 match states, 34 columns in multiple alignment FILT 1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.0 EVD 0.5252 3.8511 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHTCSSSSCSCCCCC >sa_dssp EEEDEEEDECDEDDEEEDEEEDEEEEDEEDEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC >ss_conf 9279999999999999999996277143332479 >Consensus krfkkffkkvkksvkkrlkkifkkpmvigvtipf >c2mwtA_ KRFKKFFKKVKKSVKKRLKKIFKKPMVIGVTIPF # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 0 * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 R 2 * * * * * * * * * * * * * * 0 * * * * * 2 0 * * * * * * 1000 0 0 F 3 * * * * 0 * * * * * * * * * * * * * * * 3 0 * * * * * * 1000 0 0 K 4 * * * * * * * * 0 * * * * * * * * * * * 4 0 * * * * * * 1000 0 0 K 5 * * * * * * * * 0 * * * * * * * * * * * 5 0 * * * * * * 1000 0 0 F 6 * * * * 0 * * * * * * * * * * * * * * * 6 0 * * * * * * 1000 0 0 F 7 * * * * 0 * * * * * * * * * * * * * * * 7 0 * * * * * * 1000 0 0 K 8 * * * * * * * * 0 * * * * * * * * * * * 8 0 * * * * * * 1000 0 0 K 9 * * * * * * * * 0 * * * * * * * * * * * 9 0 * * * * * * 1000 0 0 V 10 * * * * * * * * * * * * * * * * * 0 * * 10 0 * * * * * * 1000 0 0 K 11 * * * * * * * * 0 * * * * * * * * * * * 11 0 * * * * * * 1000 0 0 K 12 * * * * * * * * 0 * * * * * * * * * * * 12 0 * * * * * * 1000 0 0 S 13 * * * * * * * * * * * * * * * 0 * * * * 13 0 * * * * * * 1000 0 0 V 14 * * * * * * * * * * * * * * * * * 0 * * 14 0 * * * * * * 1000 0 0 K 15 * * * * * * * * 0 * * * * * * * * * * * 15 0 * * * * * * 1000 0 0 K 16 * * * * * * * * 0 * * * * * * * * * * * 16 0 * * * * * * 1000 0 0 R 17 * * * * * * * * * * * * * * 0 * * * * * 17 0 * * * * * * 1000 0 0 L 18 * * * * * * * * * 0 * * * * * * * * * * 18 0 * * * * * * 1000 0 0 K 19 * * * * * * * * 0 * * * * * * * * * * * 19 0 * * * * * * 1000 0 0 K 20 * * * * * * * * 0 * * * * * * * * * * * 20 0 * * * * * * 1000 0 0 I 21 * * * * * * * 0 * * * * * * * * * * * * 21 0 * * * * * * 1000 0 0 F 22 * * * * 0 * * * * * * * * * * * * * * * 22 0 * * * * * * 1000 0 0 K 23 * * * * * * * * 0 * * * * * * * * * * * 23 0 * * * * * * 1000 0 0 K 24 * * * * * * * * 0 * * * * * * * * * * * 24 0 * * * * * * 1000 0 0 P 25 * * * * * * * * * * * * 0 * * * * * * * 25 0 * * * * * * 1000 0 0 M 26 * * * * * * * * * * 0 * * * * * * * * * 26 0 * * * * * * 1000 0 0 V 27 * * * * * * * * * * * * * * * * * 0 * * 27 0 * * * * * * 1000 0 0 I 28 * * * * * * * 0 * * * * * * * * * * * * 28 0 * * * * * * 1000 0 0 G 29 * * * * * 0 * * * * * * * * * * * * * * 29 0 * * * * * * 1000 0 0 V 30 * * * * * * * * * * * * * * * * * 0 * * 30 0 * * * * * * 1000 0 0 T 31 * * * * * * * * * * * * * * * * 0 * * * 31 0 * * * * * * 1000 0 0 I 32 * * * * * * * 0 * * * * * * * * * * * * 32 0 * * * * * * 1000 0 0 P 33 * * * * * * * * * * * * 0 * * * * * * * 33 0 * * * * * * 1000 0 0 F 34 * * * * 0 * * * * * * * * * * * * * * * 34 0 * * 0 * * * 1000 0 0 //