HHsearch 1.5
NAME  c2mwdA_
FAM   
FILE  c2mwdA_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c2mwdA_.a3m 
DATE  Sat Dec  6 08:15:32 2014
LENG  28 match states, 28 columns in multiple alignment
FILT  102 out of 284 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  4.2 
EVD   0.4594  2.0316 
SEQ
>ss_dssp
CCSEEEEETTTEEEEEETTTTEEECSCC
>sa_dssp
EEDCDEEDEEEDDCCDAEEEEEECDEEE
>ss_pred
CCCEEEECCCCCEEEEECCCCEEEEECC
>ss_conf
9768999898888887678870463078
>Consensus
sxWxexxxxdGxxYYyNxxTxxsxWexP
>c2mwdA_
SEWTERKTADGKTYYYNNRTLESTWEKP
>UniRef50_A3LXR3(2-29:478) Pre-mRNA processing protein (Fragment) n=1 Tax=Pichia stipitis RepID=A3LXR3_PICST  E=0.0001 s/c=1.70 id=41% cov=104%
SEWEKVTDNEGRVYYYNSKTKETSWTLP
>UniRef50_A9UNJ8(587-614:1058) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UNJ8_MONBE   E=5e-06 s/c=1.87 id=38% cov=104%
SKWQVHAMPDGRPYYFNTETQTSVWVMP
>UniRef50_B3LAR8(338-366:497) RNA binding protein, putative n=5 Tax=Plasmodium RepID=B3LAR8_PLAKH   E=9e-06 s/c=1.78 id=38% cov=104%
SPWKQYFSkEDGRPYYHNEITGQTQWHKP
>UniRef50_C1EIU3(82-109:727) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EIU3_9CHLO   E=3e-05 s/c=1.77 id=41% cov=104%
TRWRENRAPDGRTYYYHQDTRETRWSLP
>UniRef50_B6JWN1(7-34:370) DNA replication protein n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWN1_SCHJY  E=0.0004 s/c=1.65 id=41% cov=104%
SGWTEHKAPSGIPYYWNAELKKSTYKRP
>UniRef50_UPI00006CFFD1(61-88:748) FF domain containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFFD1  E=0.0008 s/c=1.60 id=34% cov=104%
TDWIECTKQDGRVFYYNTKSKKSQWLIP
>UniRef50_UPI000186E178(1280-1305:1448) histone-lysine N-methyltransferase SUVR5, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E178  E=0.0001 s/c=1.83 id=37% cov=96%
--WKAAKDPKGRVYYYHIKERVSQWEPP
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
S 1    3541	*	*	*	*	*	*	*	*	*	*	4251	*	*	*	683	2067	*	*	*	1
       0	*	*	*	*	*	*	3928	0	0	

E 2    5497	*	1604	2233	*	3566	5861	*	3908	4886	5781	5721	5937	3641	5617	4192	*	5288	*	*	2
       0	*	*	*	*	*	*	4196	0	0	

W 3    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	3
       0	*	*	*	*	*	*	4216	0	0	

T 4    4989	5737	6714	2952	*	*	5153	4652	2594	6179	5474	6539	*	3334	3502	3451	2839	3487	*	5464	4
       0	*	*	*	*	*	*	4216	0	0	

E 5    3692	*	6910	877	*	*	*	5334	4969	6139	*	*	5020	3623	6425	5331	3503	4010	*	*	5
       0	*	*	*	*	*	*	4216	0	0	

R 6    3049	4244	*	*	4358	5893	1881	*	*	4436	5473	6342	*	6336	4457	4981	5096	3346	*	2387	6
       0	*	*	*	*	*	*	4216	0	0	

K 7    5536	*	6270	5103	4913	*	*	3895	2034	4865	5371	5711	*	5158	2630	*	2574	4129	3862	5020	7
       9	7300	*	0	*	*	*	4216	1000	0	

T 8    2685	6022	2280	*	*	*	*	*	5301	*	6201	4364	*	*	*	2666	1539	4875	*	*	8
       23	6815	7185	0	*	*	*	4216	1000	0	

A 9    3326	*	2843	2565	*	4703	*	*	3594	*	*	5206	1841	4566	5602	3694	5356	*	*	*	9
       22	6037	*	0	*	0	*	4218	1411	1000	

D 10   6509	*	1243	2604	*	4195	5983	*	4907	*	*	2972	*	4018	6465	3754	5406	*	*	*	10
       52	4807	*	532	1697	*	*	4216	1999	0	

G 11   *	*	*	*	*	65	*	*	*	*	*	5261	*	*	*	5794	*	*	*	*	11
       0	*	*	*	*	*	*	4216	0	0	

K 12   5274	*	*	5007	5217	*	4020	6390	2376	4855	6597	4886	*	4317	1251	6726	4726	*	*	4218	12
       0	*	*	*	*	*	*	4216	0	0	

T 13   7072	6367	5762	4927	6466	*	4944	4011	2690	4803	*	5997	2402	*	6876	5000	2287	2449	*	*	13
       0	*	*	*	*	*	*	4216	0	0	

Y 14   *	*	*	*	3041	*	*	*	*	*	*	*	*	*	*	*	*	*	*	187	14
       0	*	*	*	*	*	*	4216	0	0	

Y 15   *	*	*	*	3999	*	*	*	*	*	*	*	*	*	*	*	*	*	4113	185	15
       0	*	*	*	*	*	*	4216	0	0	

Y 16   *	*	*	*	2826	*	3976	*	*	*	6521	6427	*	*	*	6225	*	4910	3675	626	16
       0	*	*	*	*	*	*	4216	0	0	

N 17   *	*	5178	*	*	*	3201	*	*	*	*	258	*	*	*	5187	*	*	*	*	17
       0	*	*	*	*	*	*	4216	0	0	

N 18   3708	6022	6427	4580	6190	*	4604	4523	3331	4468	6179	6026	3973	5010	3658	2814	2734	3364	*	5712	18
       0	*	*	*	*	*	*	4216	0	0	

R 19   3671	*	4521	2788	*	6367	6418	3152	2868	6932	*	3666	*	4716	4159	3930	4317	2709	*	6632	19
       0	*	*	*	*	*	*	4216	0	0	

T 20   *	*	*	6228	*	*	*	*	*	4922	6273	5680	*	*	6108	4314	224	*	*	*	20
       0	*	*	*	*	*	*	4216	0	0	

L 21   5903	6022	*	4360	*	1740	*	*	1955	6816	5535	5059	*	3399	2338	6818	*	*	*	*	21
       0	*	*	*	*	*	*	4216	0	0	

E 22   5216	*	*	1240	*	*	6481	*	3253	6139	*	*	*	2882	4183	5184	4260	2747	*	*	22
       0	*	*	*	*	*	*	4216	0	0	

S 23   6153	*	*	*	*	4875	*	*	*	*	*	*	*	*	4673	815	1539	*	*	*	23
       0	*	*	*	*	*	*	4216	0	0	

T 24   6820	6562	6190	*	*	*	*	6384	4453	*	*	*	*	1701	4130	3106	1938	2579	*	*	24
       0	*	*	*	*	*	*	4216	0	0	

W 25   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5746	*	123	3980	25
       0	*	*	*	*	*	*	4216	0	0	

E 26   6470	*	2807	1117	*	*	6815	6505	4037	5463	*	*	*	4473	*	6342	2674	4146	*	6546	26
       0	*	*	*	*	*	*	4216	0	0	

K 27   4818	6560	6336	5762	5596	*	4776	3956	1404	4753	6201	*	3574	6418	2212	6729	6384	4970	*	6939	27
       0	*	*	*	*	*	*	4216	0	0	

P 28   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	28
       0	*	*	0	*	*	*	4216	0	0	

//