HHsearch 1.5
NAME  c2muzC_
FAM   
FILE  c2muzC_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c2muzC_.a3m 
DATE  Sat Dec 27 08:15:22 2014
LENG  26 match states, 26 columns in multiple alignment
FILT  1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.0 
EVD   0.5815  5.2289 
SEQ
>ss_dssp
CHHHHHHHHHHHCCHHHHHHHHHC--
>sa_dssp
ECDCCDCDCCDDDECDCCCCEDCD--
>ss_pred
CHHHHHHHHHHHHHHHHHHEEEEECC
>ss_conf
97899999998762656450224229
>Consensus
yykeiahalfsalalselyiavryxx
>c2muzC_
YYKEIAHALFSALALSELYIAVRYXX
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
Y 1    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	1
       0	*	*	*	*	*	*	1000	0	0	

Y 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	2
       0	*	*	*	*	*	*	1000	0	0	

K 3    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1000	0	0	

E 4    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1000	0	0	

I 5    *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1000	0	0	

A 6    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1000	0	0	

H 7    *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1000	0	0	

A 8    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1000	0	0	

L 9    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1000	0	0	

F 10   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1000	0	0	

S 11   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	11
       0	*	*	*	*	*	*	1000	0	0	

A 12   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1000	0	0	

L 13   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1000	0	0	

A 14   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1000	0	0	

L 15   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1000	0	0	

S 16   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	16
       0	*	*	*	*	*	*	1000	0	0	

E 17   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1000	0	0	

L 18   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1000	0	0	

Y 19   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	19
       0	*	*	*	*	*	*	1000	0	0	

I 20   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1000	0	0	

A 21   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1000	0	0	

V 22   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	22
       0	*	*	*	*	*	*	1000	0	0	

R 23   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	23
       0	*	*	*	*	*	*	1000	0	0	

Y 24   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	24
       0	*	*	*	*	*	*	1000	0	0	

X 25   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	25
       *	*	*	*	*	*	*	1000	0	0	

X 26   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	26
       0	*	*	0	*	*	*	1000	0	0	

//