HHsearch 1.5 NAME c2mupA_ FAM FILE c2mupA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mupA_.a3m DATE Sat Dec 12 08:14:32 2015 LENG 82 match states, 82 columns in multiple alignment FILT 26 out of 30 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4853 0.6797 SEQ >ss_dssp CCEEECCSSCCSSCCCCCEEECCSSCCEEEEEECCCCCCTTSCSCCCEEEEEESSCCCCCSCSSSCCCEECCBSSTTSCCCC >sa_dssp EBDABBCEEEEEEDDBCEEDEBEDECEAACBCCCEEEDEEEBEEDDBBDBDCBEDCEEECEEEEEECDECECCEEDDDCEED >ss_pred CCEEEECCCCCCHHHCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC >ss_conf 9351442887883341651361788863489998457776654430576166454876676531458985023874346669 >Consensus xLxCysCxxxxsxxxCxxxxxCxxxexxCxTtxxxxxxgxxxxxxxtvskxCsxxCxxxxxdxxgxxxxvsCCxtdLCNxdx >c2mupA_ MLKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCNSEL >UniRef50_UPI0000F2C8CB(20-96:122) PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2C8CB E=3e-15 s/c=1.08 id=37% cov=95% -LSCFSCSKPTALSLCTDVANCSAAEGWCQTTLLPVQSGFPFMEEKTVQRGCVASCASTDHDAIGELKPILCCNTDLC---- >UniRef50_UPI00015555FF(3-79:783) PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015555FF E=4e-12 s/c=0.94 id=28% cov=91% -LRCHVCQSESS--DCQNPVECKPNELACFSNYKEITNGSETIRSTV--KNCTANCDhcESEPTPVTSFFLSSmCCNKDLCN--- >UniRef50_UPI0001A5EEBA(23-89:190) PREDICTED: similar to RIKEN cDNA D730001G18 n=2 Tax=Homo sapiens RepID=UPI0001A5EEBA E=0.0008 s/c=0.67 id=28% cov=83% ------CHVCCGHEHCESLVECAPTDKYCVITRATSPGG------ILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCN--- >UniRef50_UPI00015555FF(671-748:783) PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015555FF E=3e-19 s/c=1.23 id=22% cov=96% -LRCYTCESQFSKEFCLNDTPCPSSSNYCKTLISSGLT--DSGHLTTYSMWCADFCEPLTKTVHGTFFMVSCCSSSLCGAD- >UniRef50_UPI000060FD78(21-96:126) PREDICTED: similar to stem cell antigen 2 n=3 Tax=Neognathae RepID=UPI000060FD78 E=2e-10 s/c=0.88 id=29% cov=94% -LFCYTCENEHSNWNCLKTYKCEDHEKYCTTTYSAAGFGKDMGYR--ITKKCSADCPETNTDFGVVAISTKCCKTSLCN--- >UniRef50_UPI0000F2C876(36-112:141) PREDICTED: similar to Ly6C antigen n=2 Tax=Monodelphis domestica RepID=UPI0000F2C876 E=9e-09 s/c=0.80 id=29% cov=91% -LKCYMCIGVNDANICKA-KTCSSGESFCGKIVMTPELGSD---MKSYIMDCTPSCEdfkKLYPQSLGFFMDASCCNTDLCN--- >UniRef50_O43653(21-94:123) Prostate stem cell antigen n=10 Tax=Eutheria RepID=PSCA_HUMAN E=9e-09 s/c=0.83 id=29% cov=91% -LLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRA-----VGLLTVISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNA-- >UniRef50_Q16553(21-99:131) Lymphocyte antigen 6E n=13 Tax=Eutheria RepID=LY6E_HUMAN E=6e-11 s/c=0.87 id=24% cov=96% -LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNLVTFGHSLSKTCSPACPiPEGVNVGVASMGISCCQSFLCN--- >UniRef50_C3Y5U6(22-103:541) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y5U6_BRAFL E=5e-08 s/c=0.72 id=31% cov=90% -FQCYSCSStLTANSDCRdsveniTTVSCAD-DSSCFAAVVKVGT-----LLTKIDRGCTPNCVSDDscMNQIGSGICRMCCKGEKCNS-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 770 1274 * * * * * * * * * 1 0 * * * * * * 1868 0 0 L 2 * * * * 3401 * * * * 143 * * * * * * * * * * 2 0 * * * * * * 4461 0 0 K 3 * * * * 4588 * * 4553 2220 4471 4216 * * 2539 1556 4277 4696 * * * 3 0 * * * * * * 4461 0 0 C 4 * 0 * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 4461 0 0 Y 5 * * * * 1810 * 4038 * * * * * * * * * * * * 613 5 0 * * * * * * 4461 0 0 T 6 * * * * 4523 * * * * * 4073 * * * * 1122 1524 3476 * * 6 0 * * * * * * 4461 0 0 C 7 * 0 * * * * * * * * * * * * * * * * * * 7 0 * * * * * * 4584 0 0 K 8 * * * 3006 * * 3179 4170 1978 4294 * * 4126 2562 * 2876 4578 * * * 8 0 * * * * * * 4584 0 0 E 9 3582 * 2844 2953 * 4170 5638 * 4331 * * 3472 * 3301 * 2428 4657 3242 * * 9 69 4423 * 0 * * * 4584 1000 0 P 10 3231 3939 * 2984 * * * * 4657 2125 * * 2065 2853 * * * 4170 * * 10 0 * * * * * * 4584 0 0 M 11 * 3939 * * 4467 * 3048 * 4294 4657 4822 4170 3874 * * 3371 1396 4565 * * 11 0 * * * * * * 4584 0 0 T 12 2630 * 2756 * * 2908 * * * * * 5017 4934 * 4745 1248 4822 * * * 12 84 * 4140 * * * * 4584 0 0 S 13 4086 * 4674 4520 * 4550 3862 4504 4374 3573 * 1529 * * * 4712 5568 2601 * * 13 0 * * * * * 0 4440 0 1000 A 14 4712 * * 1638 3714 * * 3824 * 4215 * 4086 4559 * * 1978 * * 3560 * 14 0 * * * * 0 * 4440 0 1000 S 15 4059 * 2537 4934 4467 * 3965 4170 4578 3478 * 3174 * 3364 3670 3307 * * * 4294 15 0 * * * * * * 4584 0 0 C 16 * 0 * * * * * * * * * * * * * * * * * * 16 0 * * * * * * 4584 0 0 R 17 4465 * * 3939 5017 * * * 3386 1806 * 3070 * 3375 3014 * 3171 5224 * * 17 69 4423 * 2585 263 * * 4584 1000 0 T 18 3393 * 4331 * * 4806 4641 * 3472 4745 * 2798 * 2694 * 3380 1958 * * * 18 82 * 4170 * * * * 4584 0 0 I 19 * * 4349 * * * * 1907 * 3857 * * 2681 * * * 1595 2962 * * 19 0 * * * * 0 * 4442 0 1000 T 20 2916 * * 3738 * * * 5035 4170 * 4657 * * 3070 * * 1836 2130 * 4675 20 0 * * * * * * 4584 0 0 R 21 * * * 3036 * * * 3429 3123 * * 2174 4467 4641 4822 2654 2563 * * * 21 0 * * * * * * 4584 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 4584 0 0 K 23 2228 * * 4675 * 5311 * 4599 2541 * * 4578 4467 * * 1736 3038 * * * 23 0 * * * * * * 4584 0 0 P 24 3602 * 2577 3117 * * 4745 * * 3770 * 4578 2141 4004 * 2823 4267 * * * 24 69 * 4423 * * * * 4584 0 0 E 25 4260 * * 3141 * 2831 3755 * * 4468 * 1966 * 4258 4550 3037 3295 * * * 25 0 * * * * 0 * 4521 0 1000 D 26 4641 * 2007 987 * 4565 * * 4626 * * * * 3670 * 4467 * * * * 26 58 * 4657 * * * * 4584 0 0 T 27 4520 * * 3499 * 4281 * * 2494 4081 * 2903 4577 * * 3221 1751 * * * 27 57 * 4701 * * 0 * 4541 0 1000 A 28 2885 * * * 2140 * 4626 3940 * * 2775 * * 4526 * 4385 * * 4306 2033 28 0 * * * * 0 * 4564 0 1000 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 4584 0 0 M 30 * * * * 3274 4170 * 4626 1418 3908 4822 * * 4331 * * 3709 2680 4565 * 30 0 * * * * * * 4584 0 0 T 31 4423 * * * * * * 3939 4170 * * * * * * 4140 366 * * * 31 0 * * * * * * 4584 0 0 T 32 3492 * 4657 * * * * 4170 * 2606 * 4140 * 4578 * 4806 1101 4294 * * 32 0 * * * * * * 4584 0 0 L 33 * * * * * * * 3118 * 1942 4295 * * * 3219 4294 5035 2456 * 2304 33 0 * * * * * * 4584 0 0 V 34 2704 * * 4578 * * * 3611 4140 4331 4170 * * * * 2343 4806 2626 * 2590 34 0 * * * * * * 4584 0 0 T 35 4675 * * 4140 * 4647 3070 * 4423 * * 4578 4331 4641 3611 1931 2167 * * * 35 60 * 4626 * * * * 4584 0 0 V 36 2859 * * * * 2881 * 4089 4957 4116 4611 4917 4087 * 3605 3816 * 1777 * * 36 128 * 3558 * * * 0 4548 0 1000 E 37 * * 4864 1537 * 1836 * * * 4259 * 3366 3801 4156 * * 3971 * * * 37 0 * * * * 1356 715 4414 0 1869 A 38 4714 * 4794 4918 4510 3848 * 2945 * 3412 * 4023 * * * 2194 2078 * * 4687 38 190 * 3018 * * * 0 4451 0 1434 E 39 * * * 2047 * 706 * * * * * * * * * * * 2787 * * 39 205 * 2916 * * * 0 4321 0 2484 Y 40 * * 4471 * 3936 4115 * * 4128 * * 3067 * * * 2168 3962 * * 1439 40 97 * 3945 * * 2675 246 4106 0 3162 P 41 * * 1462 3670 * * * * 4150 3842 * * 1210 * * * * * * * 41 114 * 3718 * * 1289 760 4088 0 3024 F 42 4634 * * * 1483 * * 4313 4158 4096 4357 * * * 3508 3205 3745 3091 * * 42 0 * * * * 2190 357 4209 0 2746 N 43 * * * * 4647 1336 * 3790 * 4920 4084 2865 4692 3750 4292 * 4038 4739 * * 43 0 * * * * 1998 416 4236 0 2420 Q 44 * * * 3432 3255 2864 4248 * * 2752 * 4368 4416 2245 3924 * * * * 3441 44 0 * * * * 1476 643 4315 0 2002 S 45 * * 3408 4250 4558 4201 * * * 1850 4055 3630 * * 3623 2174 * 4823 * * 45 253 * 2639 * * 626 1506 4462 0 1514 P 46 3569 * * * * * 3881 3125 3031 * * * 3463 * * 2722 1440 * * * 46 0 * * * * * 0 4383 0 2104 V 47 * * * * * * * 4361 4123 3675 3379 * * * * 2931 1226 2637 * * 47 100 * 3904 * * 321 2325 4383 0 2104 V 48 * * * * * * 4654 1746 * 4200 * * * * * * * 1279 * 2354 48 0 * * * * * 0 4442 0 1413 T 49 * * 4292 * * * * 3258 * * 3838 * * 4242 * 1460 1481 * * * 49 0 * * * * 740 1317 4442 0 1413 R 50 4582 * * * * * * * 836 * 2808 * * * 2202 * 4726 * * * 50 0 * * * * * 0 4586 0 1000 S 51 4940 * 4152 * * 1973 * * 3221 * 4889 4128 * * * 2055 4280 * 2590 * 51 0 * * * * * 0 4586 0 1000 C 52 * 0 * * * * * * * * * * * * * * * * * * 52 0 * * * * * 0 4586 0 1000 S 53 1681 * * 4631 * * * * * * * * * * * 1482 2063 4305 * * 53 0 * * * * * 0 4586 0 1000 S 54 1969 * 2590 * * * 4551 * * 4524 * 4961 1931 4940 * 2595 * * * * 54 0 * * * * * 0 4586 0 1000 S 55 4280 * 4658 * 3141 * * * 3523 * 4582 2758 * 4940 4551 1933 3223 3741 * * 55 0 * * * * * 0 4586 0 1000 C 56 * 0 * * * * * * * * * * * * * * * * * * 56 0 * * * * * 0 4586 0 1000 V 57 4305 * 4128 2882 * * * 4616 5159 4551 * * 1911 2636 * * * 2195 * * 57 260 2600 * 1032 969 0 * 4586 2132 1000 A 58 2574 * 4565 2883 * * * * 4170 * * 3939 1596 * * 2581 4806 * * * 58 0 * * * * * * 4584 0 0 T 59 4647 * 2960 4294 * * * 2429 * 3311 * * * * * 1796 2278 * * * 59 0 * * * * * * 4584 0 0 D 60 * * 1306 4140 * 3460 * 4626 * * * 3032 * * * 4565 2759 * * 3393 60 69 4423 * 1000 1000 * * 4584 1000 0 P 61 5638 * * * * * 4331 4647 2606 3908 4423 * 2123 3611 * * 4675 1931 * * 61 0 * * * * * * 4584 0 0 D 62 * * 1139 * * * * * * * * 2292 * 4170 * 3939 2178 * * * 62 0 * * * * * * 4584 0 0 S 63 4331 * * * 3666 2827 * 3908 * 4647 * * 4140 4423 * 2176 4578 2216 * 4565 63 0 * * * * * * 4584 0 0 I 64 * * 3939 3670 * 2076 4467 1558 4657 4170 4641 * * * * * * 4140 * 4565 64 0 * * * * * * 4584 0 0 G 65 * * * 4599 * 760 * 3231 * * * * * * * 4915 4140 2539 * * 65 0 * * * * * * 4584 0 0 A 66 2374 * * 4331 4170 3611 * 4305 * 3781 4934 * * 4267 3939 3274 2606 3658 * * 66 0 * * * * * * 4584 0 0 A 67 1935 * * * 2667 3142 * * 4565 4331 * 4657 * 3684 * 4294 2590 4599 * * 67 0 * * * * * * 4584 0 0 H 68 4647 * * * 3294 * 2737 2977 3444 3025 2766 * * * 2773 * * 3775 * * 68 0 * * * * * * 4584 0 0 L 69 3908 4423 4170 * * 4294 * * * 3441 4467 3611 1748 * * 2793 3070 * * * 69 0 * * * * * * 4584 0 0 I 70 4170 * * * * * * 2488 * * 3670 * * 4626 4423 4140 3241 1191 * * 70 0 * * * * * * 4584 0 0 F 71 * * * * 4822 * * * 4675 4331 4423 * * * * 766 2632 * * 3644 71 84 4140 * 0 * * * 4584 1000 0 C 72 * 0 * * * * * * * * * * * * * * * * * * 72 0 * * * * * * 4584 0 0 C 73 * 0 * * * * * * * * * * * * * * * * * * 73 0 * * * * * * 4584 0 0 F 74 * * 3606 4806 3729 * * * 3543 * * 1919 * 1910 * 3111 * * * 3745 74 0 * * * * * * 4584 0 0 R 75 * * * * * 3161 4641 * 4140 * * * * 3781 4822 1796 1339 * * * 75 0 * * * * * * 4584 0 0 D 76 * * 1199 3343 3460 * * * * * * 3628 * * * 1980 4626 * * * 76 0 * * * * * * 4584 0 0 L 77 * * * * * * * * 4423 171 * * * 3939 * * * * * * 77 0 * * * * * * 4584 0 0 C 78 * 0 * * * * * * * * * * * * * * * * * * 78 0 * * * * * * 4584 0 0 N 79 * * * * * 4431 * * * * * 68 * * * * * * * * 79 0 * * * * * * 4485 0 0 S 80 1766 * * * 3739 * * * * 4179 * * * * * 1803 2150 3963 * * 80 0 * * * * * * 3093 0 0 E 81 * * 242 2695 * * * * * * * * * * * * * * * * 81 0 * * * * * * 2476 0 0 L 82 * * * * * * * * * 0 * * * * * * * * * * 82 0 * * 0 * * * 1000 0 0 //