HHsearch 1.5
NAME  c2mp2C_
FAM   
FILE  c2mp2C_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c2mp2C_.a3m 
DATE  Sat Jul  5 08:28:22 2014
LENG  26 match states, 26 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5050  3.3108 
SEQ
>ss_dssp
CCSCCCCCCSCCCCCSSCCCCCCCC-
>sa_dssp
EEEEEEEEEEEEEEEEEEEEEEEEE-
>ss_pred
CCCCEEEEEEECCCCCEEEEEECCCC
>ss_conf
97532776652578828998531789
>Consensus
xxgxeivdltcesxepvvvdlthndx
>c2mp2C_
TVGDEIVDLTCESLEPVVVDLTHNDX
>UniRef50_UPI0001555274(42-66:143) PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555274  E=0.0004 s/c=1.83 id=77% cov=100%
SAGEEVVDLTCESSEPVVVDLTHND-
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
T 1    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	1000	*	*	*	1
       0	*	*	*	*	*	*	1149	0	0	

V 2    1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	2
       0	*	*	*	*	*	*	1149	0	0	

G 3    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1149	0	0	

D 4    *	*	1000	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1149	0	0	

E 5    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1149	0	0	

I 6    *	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	1000	*	*	6
       0	*	*	*	*	*	*	1149	0	0	

V 7    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	7
       0	*	*	*	*	*	*	1149	0	0	

D 8    *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1149	0	0	

L 9    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1149	0	0	

T 10   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	10
       0	*	*	*	*	*	*	1149	0	0	

C 11   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1149	0	0	

E 12   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1149	0	0	

S 13   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	13
       0	*	*	*	*	*	*	1149	0	0	

L 14   *	*	*	*	*	*	*	*	*	1000	*	*	*	*	*	1000	*	*	*	*	14
       0	*	*	*	*	*	*	1149	0	0	

E 15   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1149	0	0	

P 16   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1149	0	0	

V 17   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	17
       0	*	*	*	*	*	*	1149	0	0	

V 18   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	18
       0	*	*	*	*	*	*	1149	0	0	

V 19   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	19
       0	*	*	*	*	*	*	1149	0	0	

D 20   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1149	0	0	

L 21   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1149	0	0	

T 22   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	22
       0	*	*	*	*	*	*	1149	0	0	

H 23   *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1149	0	0	

N 24   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1149	0	0	

D 25   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1149	0	0	

X 26   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	26
       0	*	*	0	*	*	*	1000	0	0	

//