HHsearch 1.5 NAME c2mhjA_ FAM FILE c2mhjA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mhjA_.a3m DATE Sat Dec 27 08:17:09 2014 LENG 95 match states, 95 columns in multiple alignment FILT 119 out of 717 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.8 EVD 0.4309 0.2525 SEQ >ss_dssp CCCCCCSSCCBCSSTTSCEEECCEEEEESCSSSCHHHHHGGGTTSSSSEEEHHHHHHHHHHHHHHHHHTTCTTCEEECCCSSCCSSEEEEEEECC >sa_dssp EEDEDEEECCBDEDEEBDBCDAEDACBCDBEEBDCEEADECAEDBDDDABADDCADDAACDAADBACEDEDEEAEADADCEECCEBDADACBECE >ss_pred CCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEECCCCEEEEEEECC >ss_conf 97653014312322379748874899977601798898875320489716999999999999999986698189998324353699799999429 >Consensus xxxxxxxxvxxxxxxxGpxxxIxxVxixGnxxxxxxxlxxxxxxxxGxxxxxxxixxxxxxIxxxYxxxGYxxaxVxixxqxxxdgxvxixVxEG >c2mhjA_ MAHHHHHHVDDDDKMGGPTVLVKRFQLSGNRQFDDRRLLALLHDLPGQELNLSQLHAAAARIGDFYQEKGYVLARAFLPAQEIQDGTVRIEVLEG >UniRef50_A0L9N1(88-161:692) Polypeptide-transport-associated domain protein, ShlB-type n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9N1_MAGSM E=8e-08 s/c=0.79 id=19% cov=72% ------------------KLTVDGFRLEGHPGVDSAAVDEVITPWKGRELTFAEFEQMVHAVAAFLRENGHPDAQVMISRANIKN---------- >UniRef50_Q1H433(68-154:572) Hemolysin activator HlyB n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H433_METFK E=5e-09 s/c=0.72 id=19% cov=83% -----------------PCFTIRQISLEGEhTDLFQFALQSVLQGehlAIGRCLGAQGINTVMSHMQNTLVAQGFVTTRILAGSQDLSNGHLRLTVIPG >UniRef50_Q93Q09(82-175:589) Large superatant protein exporter n=6 Tax=Pasteurellaceae RepID=Q93Q09_HAEDU E=2e-05 s/c=0.53 id=15% cov=63% ------------------------------------DFDRITKQYIGHPLNKKVIFSLVKALTEALHKAGYSTSGITLKQAEAKTGKLEFNIVWG >UniRef50_Q075M0(97-174:258) Plastid outer membrane protein (Fragment) n=1 Tax=Prototheca wickerhamii RepID=Q075M0_PROWI E=7e-05 s/c=0.62 id=18% cov=77% ---------------------LSHFEVEGAKVLPRQLVKDLRAELLAEgeaPFTMQTMARIRNAIEGWYRTRGYGLC--YISQFTgMDNGSITVHVNEG >UniRef50_A6GJC0(164-240:892) Outer membrane protein, OMP85 family n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJC0_9DELT E=9e-05 s/c=0.62 id=17% cov=80% ------------------RPTIRKIIVEGNSKVKLDDINEALSLTTNAVLDLGAVKANVEMVQAVYTQSGFFLAEVDyaVRPVDDQPGKVDVVFV-- >UniRef50_C4UL76(36-126:534) Hemolysin activator protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL76_YERRU E=3e-07 s/c=0.62 id=15% cov=93% ------HIIEKSDEfethLSPQCLNISSVYIQGNTIFSNDNLPRIIK-KLNECITIEHVNKLMRDIKNKYISNGYIMVAVDTLPLNKKR-ELGISIIEG >UniRef50_B2I323(249-341:834) Outer membrane protein/protective antigen OMA87 n=18 Tax=Acinetobacter RepID=B2I323_ACIBC E=8e-07 s/c=0.59 id=18% cov=80% ----------------GSQFKFGQTKFLGDALYKPEELQALKIYKDGDTYSQEKVNAVKQLLLRKYGNAGYYFADVNIVPQiNNETGVVDLN---- >UniRef50_B5YHC4(174-264:748) Outer membrane protein, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHC4_THEYD E=0.0009 s/c=0.49 id=19% cov=60% ----------------GNKVKIKEIKFEGNKAISSRKIKKVMATSERKFYSFitgsgfykkYEMLQDLEKIKDLYYDNGYL------------------- ---- >UniRef50_A5G1A5(279-361:785) Surface antigen (D15) n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G1A5_ACICJ E=3e-06 s/c=0.63 id=19% cov=84% ----------------GPRYHIASVKVESSvTNLSAKSLRALVPIEKGDIFDGDAIQTAVKNISKAAQNRGFAFAQVVPDVHENHANHtidLTFRVVEG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 587 * * * * * * 1580 * * 1 0 * * * * * * 2249 0 0 A 2 602 * * * * 1552 * * * * * * * * * * * * * * 2 0 * * * * * * 2249 0 0 H 3 * * * * * * 1623 * * * * 1580 * * * * * * * 1552 3 0 * * * * * * 2249 0 0 H 4 * * * * 1303 * 750 * * * * * * * * * * * * * 4 0 * * * * * * 3140 0 0 H 5 * * * 2567 * * 2689 * * * * 1593 * * 2517 * * 2556 * * 5 0 * * * * * * 3520 0 0 H 6 * * 2567 1570 * * 1624 * * * * 2556 * * * * * * * * 6 0 * * * * * * 3520 0 0 H 7 2858 * * * * * 1406 2902 3079 * * * * * * * * * * 2104 7 0 * * * * * * 4041 0 0 H 8 3805 * * * * * 2510 2357 2457 * * 2407 * * 3334 3509 * * * * 8 0 * * * * * * 4613 0 0 V 9 * * * 3700 * * * 2310 * 3578 * * * * * * * 649 * * 9 0 * * * * * * 5164 0 0 D 10 3909 * 1560 1227 3583 * * * * * * * * * * 3578 * * * * 10 0 * * * * * * 5164 0 0 D 11 * * 2303 1350 * * * 3910 3840 * * * * * * 2313 * 3890 * * 11 107 * 3811 * * * * 5305 0 0 D 12 4079 * 1132 * 4227 4405 * * * * * 4076 * 3199 * 3209 3216 * * * 12 0 * * * * * 0 5721 0 1000 D 13 4195 * 1966 3067 * * * 2658 4453 4293 * * 3173 * * * 4190 2744 * * 13 0 * * * * * 0 5883 0 1000 K 14 4154 * 4557 2713 * * * * 990 * * 4479 * 3271 * 4268 4468 * * * 14 78 4257 * 2000 415 * 0 5981 1000 1000 M 15 3387 * 4207 2008 * 3459 * 4520 * 4257 4462 * 3212 * * * 2699 4254 * 4181 15 80 * 4207 * * * 0 5981 0 1000 G 16 2484 * 3029 4497 * 1234 * * 4602 * * * * * * 2411 * * * * 16 199 4600 3512 0 * 1069 934 6272 1000 1687 G 17 5413 * 5234 4467 * 429 * * 4463 5412 * 4330 4520 * * * * * * * 17 54 5549 6024 3000 193 1610 572 7415 1000 2328 P 18 4044 * 5002 3418 * * 4896 * 3620 5743 * 4817 1169 4857 4652 5913 5031 3655 * * 18 85 4539 6172 2139 371 572 1611 7948 2261 2299 T 19 * 3109 * 5023 * * * 5453 2402 5128 * 3518 5532 4269 1850 4359 3125 6484 * * 19 0 * * * * 929 1075 8334 0 1782 V 20 4247 * * 6672 2460 * 6553 4081 6772 3126 7106 * 1859 * * 6591 * 3347 * 2551 20 16 * 6520 * * * 0 8487 0 1000 L 21 4080 * 6493 6239 4984 * 5127 4148 4063 3596 6140 4462 4343 5253 3389 5582 2233 2989 * 3892 21 10 7182 * 2585 263 0 * 8497 1000 1625 V 22 * * * * 4385 * * 1504 * 1918 5945 * * * * * * 1650 * * 22 14 6672 * 2322 322 * * 8489 1000 0 K 23 5164 * 4095 4661 6498 3503 4084 * 2628 6858 * 3544 6332 3962 2413 3075 4120 6463 * 6986 23 0 * * * * * * 8528 0 0 R 24 3191 * 2982 3053 * 3184 4336 * 2945 * 6716 3698 * 4085 3421 3819 5281 6815 * 6679 24 0 * * * * * * 8547 0 0 F 25 * * * * 3775 * * 1595 * 3770 * * 6331 * * * * 1121 * 4315 25 0 * * * * * * 8485 0 0 Q 26 5838 * 3711 2640 7102 4904 4670 3565 3892 4858 6479 4137 * 3498 2734 4122 4424 4064 * 6856 26 0 * * * * * * 8485 0 0 L 27 * * * * 1611 * * 1841 * 2696 6583 * * * * * * 2532 6751 4427 27 43 6943 5535 2322 322 * * 8482 1000 0 S 28 4409 * 3716 1909 * 7002 5256 4115 4074 4364 * 5650 5402 3866 4280 3358 3651 4060 * 6615 28 35 5802 7315 1885 455 894 1114 8443 1772 1734 G 29 5912 * 4658 6668 5750 328 * * 5977 * * 4425 6531 * * 4915 6310 * * * 29 13 6759 * 0 * 1096 910 8467 1000 1585 N 30 3177 * 4004 3959 * 3970 6854 6839 6480 3738 * 1260 5407 6675 6935 3760 5183 4831 * * 30 21 6107 * 1637 560 0 * 8488 1767 1000 R 31 5028 * 4069 3213 5737 5990 4202 4979 2482 4245 * 5815 4255 4391 5524 3429 2330 5758 * * 31 16 6486 * 0 * * * 8482 1000 0 Q 32 3211 * 6093 4379 5812 4467 6014 3674 2786 3021 6531 5043 5681 4846 4242 3910 5055 2824 * 5788 32 16 * 6486 * * * * 8482 0 0 F 33 5089 * * 5977 2106 3988 * 2893 * 1912 7142 * * 6545 6515 6417 6439 2993 6626 3809 33 11 7083 * 1585 585 * 0 8464 1000 1000 D 34 4687 * 2750 4804 6736 * 6670 * 2960 5314 * 6234 1996 6792 5471 2391 3385 * 5508 * 34 41 5162 * 1213 815 0 * 8493 2440 1000 D 35 3833 * 2982 2529 6673 * * 5806 3978 3720 6915 4301 3683 5436 3921 3468 3008 6123 * 6966 35 0 * * * * * * 8506 0 0 R 36 3213 * 3189 2089 5777 4556 6998 6643 3239 * 6099 5380 4945 4143 4208 2772 4843 * * * 36 57 4698 * 1535 611 * * 8506 2878 0 R 37 3055 * 2395 2187 4770 6328 * * 5251 6670 * 5494 * 3587 4056 4600 4279 3370 6521 5719 37 12 * 6915 * * * * 8506 0 0 L 38 5363 * * * 4774 * * 2280 5620 937 * * 5352 6552 5808 * 6817 3095 * 6436 38 11 7012 * 3170 170 0 * 8507 1000 1000 L 39 3184 * 4277 2668 5643 6661 * 5091 3590 3016 6184 3792 6879 3512 2747 5318 4888 6966 6993 6739 39 27 5773 * 1240 794 * * 8506 1666 0 A 40 2409 * 3728 2433 * 5772 6720 6470 2794 6730 * 5404 4106 3706 3328 3583 5872 * * * 40 46 5694 6340 2927 203 * * 8506 1516 0 L 41 2793 * 6657 4189 4122 6748 * 2573 4542 2435 5188 5017 6789 5589 5145 6247 4360 3209 5029 6463 41 14 * 6650 * * * 0 8503 0 1000 L 42 4329 7123 7135 * 3895 * * 2571 6308 2042 4646 5510 * * 6441 4298 3715 2421 4967 5262 42 48 4946 * 2826 219 * 0 8483 2783 1728 H 43 3199 * 4949 4091 7088 3593 5155 * 2473 4707 6553 3658 5149 3254 3702 4135 4276 4774 * 5749 43 12 * 6878 * * * 0 8483 0 1728 D 44 3326 * 5405 4588 4720 4415 * 3738 4571 2437 5447 4340 2812 5723 5139 4203 3477 4989 6506 * 44 0 * * * * 553 1652 8479 0 2329 L 45 5198 * 7058 4879 3790 6531 4552 4321 2488 3100 4948 7150 7023 3828 3771 5088 5932 4355 4750 2857 45 69 4655 7161 863 1152 0 * 8528 2893 1000 P 46 3969 * 6143 2976 5965 5819 * 3927 2829 2830 6756 * 2852 4579 4190 5352 4685 3701 * 5081 46 59 4643 * 2638 253 0 * 8554 3409 1000 G 47 5776 * 4140 6554 * 699 5704 6671 5299 * * 2965 7150 * 4094 4826 * * * 6057 47 21 6079 * 2480 285 * * 8547 1692 0 Q 48 4683 * 2978 3153 5751 3523 4635 * 2968 6082 * 5873 * 2996 2690 3540 4814 6103 * * 48 26 6903 6767 2807 222 * * 8547 1000 0 E 49 4211 3210 4273 4324 6662 6482 * 2757 4478 5381 * 5358 2351 * 3685 * 4097 3126 6947 5705 49 14 6712 * 3170 170 0 * 8548 1000 1000 L 50 5092 * * * 2302 * 6693 2869 6651 1758 6589 6215 * 6488 6490 * * 3091 * 2715 50 9 7303 * 1585 585 * * 8547 1000 0 N 51 5992 * 2401 6903 * 3324 * 6765 5538 * * 2504 5761 4526 4364 2126 2834 * * * 51 0 * * * * * * 8547 0 0 L 52 5224 * 5549 3707 4245 4903 * 3153 5507 3088 5835 4715 3333 3519 3367 4454 3654 4511 6470 5798 52 25 5860 * 3108 178 * * 8547 1613 0 S 53 2808 * 3685 2806 6747 4640 * 6966 3811 5514 * 4306 7059 3064 3681 3051 3797 4734 * * 53 0 * * * * * * 8547 0 0 Q 54 3401 * 2693 3487 * 4079 6904 5992 3176 4450 7059 6305 * 3335 3657 4144 3389 4058 * 6470 54 0 * * * * * * 8547 0 0 L 55 5988 * * * 5021 * * 1824 * 1375 4114 6589 * * * * * 2326 * 5792 55 0 * * * * * * 8547 0 0 H 56 3679 6693 4715 2755 4934 6574 4729 5190 4473 4375 5842 3497 * 3045 3907 3660 3753 4971 * 4457 56 0 * * * * * * 8547 0 0 A 57 3228 * 3761 2412 6726 4570 * 5300 3005 4275 * 3704 * 3745 3211 4031 4310 7031 * * 57 19 6277 * 1739 514 * * 8547 1505 0 A 58 2352 6589 2406 5895 6538 4117 * 2605 * 2394 4521 5018 * * * 5241 4552 6753 * 6329 58 16 6488 * 2000 415 * * 8547 1000 0 A 59 2660 * * 4003 5909 6768 * 3218 4063 3389 4973 6744 6511 4715 3260 4975 3913 2336 * * 59 15 * 6574 * * * * 8547 0 0 A 60 3542 * 2515 2791 * 5481 4845 6514 2878 6043 * 2920 * 3385 3601 5251 5169 6501 * * 60 0 * * * * * 0 8514 0 1000 R 61 2105 * 3824 3307 4839 5065 * 4360 3339 5717 7169 5104 6868 4869 2322 4693 7297 5503 * 5749 61 0 * * * * * 0 8514 0 1000 I 62 4386 * * * 6466 * * 1260 * 1586 5375 * * * * * * 2589 * * 62 8 * 7522 * * 0 * 8514 0 1000 G 63 3667 * 5924 3023 * 5260 6613 4688 3446 5294 6370 4656 * 3289 3144 3196 2480 5325 * 6802 63 0 * * * * * 0 8553 0 1000 D 64 3048 * 2902 3049 * 5107 * * 2920 6805 * 2771 * 3541 3685 5197 3478 6740 * 5807 64 0 * * * * * 0 8553 0 1000 F 65 3852 * * 4305 2720 6900 5698 4007 3218 2718 6935 5809 * 5423 4423 * * 3576 4061 2843 65 0 * * * * * 0 8553 0 1000 Y 66 6116 6528 * * 4839 6468 * 5465 * 2280 6529 * * * * * * 6411 * 562 66 0 * * * * 0 * 8553 0 1000 Q 67 4496 * 5875 5392 6132 3527 4434 3430 3654 3352 6527 6192 * 3023 2560 5017 5471 3874 * 4091 67 0 * * * * * * 8549 0 0 E 68 3320 * 2550 2754 * 4290 5813 * 3454 * 5741 3530 * 3627 3930 2972 4963 * * 6721 68 0 * * * * * * 8549 0 0 K 69 3532 6822 4892 3622 6765 6591 4335 5315 2368 4993 * 3843 * 3101 2445 3963 6227 6307 * 6567 69 20 * 6192 * * * * 8549 0 0 G 70 * * 5072 * * 169 * * 5961 * * 5941 * * 5225 6668 6404 * * * 70 0 * * * * * 0 8515 0 1000 Y 71 * * 5545 * 2517 * 5213 5784 5917 4611 * * * 6873 5320 * 6736 6500 7204 643 71 0 * * * * 0 * 8596 0 1000 V 72 2895 * 5821 * 3562 5157 7045 3073 6210 3011 6643 5697 2956 * 5798 3548 5464 3293 * 3559 72 11 * 7082 * * * * 8467 0 0 L 73 4092 6801 3119 5111 3300 4891 5822 5945 6542 2530 5697 4021 * 6064 5658 5799 2176 5451 6695 4382 73 9 * 7348 * * * 0 8464 0 1000 A 74 1314 6476 * * 4914 5816 6351 4890 * * * * 6611 * * 2416 3238 2596 * 5607 74 15 6623 * 1000 1000 0 * 8464 1000 1627 R 75 4500 * 4844 4019 5194 4860 6188 5295 3216 4882 * 4070 * 2918 2368 3323 3659 6576 6568 5000 75 28 * 5698 * * * * 8454 0 0 A 76 2738 5602 * 6173 6765 * * 3007 * 4411 * * 6752 6566 * * 6987 719 * * 76 159 3559 5666 1379 700 0 * 8440 4173 1728 F 77 4273 * 3329 5364 4447 6270 5383 4291 5922 4761 5698 3462 * 4430 5783 3278 2928 3221 * 3047 77 84 4501 6350 484 1811 0 * 8470 3264 1776 L 78 3997 * * 7043 4175 4624 6698 2058 6569 3073 6580 6622 3789 * * 4979 4540 1970 * 4972 78 100 4719 5102 386 2089 0 * 8322 2745 1000 P 79 4087 * 3122 3658 * 4967 4628 5832 6707 6565 * 5401 1442 4116 4981 4011 5417 4172 * 6052 79 27 5765 * 1055 947 1554 601 8318 1693 2361 A 80 3274 * 5156 2973 6375 6790 * 4045 4757 6719 * 4084 2230 3672 3992 5597 4060 3071 * * 80 0 * * * * 979 1021 8340 0 1791 Q 81 6877 * 4096 4534 * 3800 5164 4122 4243 4394 6664 5876 4564 1364 5883 5750 3816 4171 * 6308 81 13 6826 * 0 * 0 * 8341 1000 1000 E 82 5831 * 2150 3505 * 4407 6313 5528 4437 6422 * 2585 5591 4562 3318 4021 3747 4189 * 6810 82 26 5807 * 1109 898 * * 8342 1741 0 I 83 4258 * 3911 4199 3907 6689 * 2752 5119 2282 4991 4581 4793 * 5289 4407 4195 3080 * 6287 83 26 5805 * 612 1533 * * 8332 1790 0 Q 84 3397 * 3244 3159 * 4666 5719 * 2873 6118 * 4627 5228 3390 3462 3404 3767 4132 * * 84 12 * 6955 * * * * 8332 0 0 D 85 5179 * 1295 2590 6094 3410 6447 * 5851 * * 3224 5669 4704 4822 4937 5145 * * * 85 72 5183 5555 675 1420 0 * 8336 2397 1000 G 86 4273 * 4946 4543 * 714 5616 * 4983 * * 3351 6510 6734 5759 6466 6301 4597 6792 * 86 96 3955 * 1469 647 0 * 8297 3270 1774 T 87 6694 * 5371 3743 5806 * 5635 3086 3767 5490 * 4706 6869 5035 3269 3649 2402 2498 * 6274 87 150 3343 * 1404 685 * * 8325 4521 0 V 88 5515 * * * * 6317 * 2286 * 1666 * * * * 6507 * * 1233 * 6827 88 43 5091 * 628 1503 * * 8325 2303 0 R 89 4396 * 3463 4939 * 5758 5583 4347 3122 5646 * 3651 6432 4453 3380 5771 1867 3862 * 6406 89 26 5805 * 1000 1000 * * 8325 1669 0 I 90 * * * * 2319 * * 1951 * 1827 5564 * * * * * * 2139 * 6518 90 54 4768 * 1000 1000 * * 8325 2754 0 E 91 5661 * 4047 2889 6712 6594 6303 5076 3932 5628 6466 3472 6307 3251 2691 4557 3163 3201 * * 91 14 6744 * 1000 1000 * * 8335 1000 0 V 92 6628 * * * 6450 * * 1324 * 3119 * * * * * * * 1152 * 6172 92 0 * * * * * * 8323 0 0 L 93 3535 * 3515 4588 6230 * 5332 2674 4640 3782 6243 4718 * 4232 4277 6576 3684 2176 * 6457 93 0 * * * * * * 8116 0 0 E 94 5216 * 6313 381 * * * * * 6202 * * 3641 * 6163 6648 6265 * 5438 4677 94 0 * * * * * * 8005 0 0 G 95 * * * * * 0 * * * * * * * * * * * * * * 95 0 * * 0 * * * 7692 0 0 //