HHsearch 1.5 NAME c2mf8A_ FAM FILE c2mf8A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mf8A_.a3m DATE Sat Nov 9 08:22:37 2013 LENG 75 match states, 75 columns in multiple alignment FILT 80 out of 84 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.5082 2.5371 SEQ >ss_dssp CCSSSCSSCCSCSCSSSSCCCCSSSSCCCSSCCSCCTTCCCCCCCCSCSCSSCCSCSCSSSSCCCCSSSSCCSCC >sa_dssp EEDAECEEBDADCBEDBDDCCAEDEDBCCEECEEDDEEDEECEDDECAEDEDBECEDBEEEEEEDBEDEDBCDEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >ss_conf 960689875751114777786515567867664510023320002588867688756347654554255587369 >Consensus xxxCPtpGCxGxGHvxGxyxxHrsxxgCPxaxxnxxxxxxxxxxxlrcPtpgcxgxgHvxgxxxxhxsxsgcpxa >c2mf8A_ LLTCPTPGCDGSGHITGNYASHRSLSGCPLADKSLRNLMAAHSADLKCPTPGCDGSGHITGNYASHRSLSGCPRA >UniRef50_B7PTD5(826-927:1053) Lethal(3)malignant brain tumor, putative n=1 Tax=Ixodes scapularis RepID=B7PTD5_IXOSC E=1e-16 s/c=0.86 id=47% cov=99% --TCPTPGCTGLGHVKGpMFATHHSAYGCPYSKENLErdgpvpdrlhgtdpgpgakapdaevstaPPADTKDGLRRCPTPGCNGSGHLNQKYSVHHKASG CPLA >UniRef50_UPI000176135F(820-900:1052) PREDICTED: im:7137770 n=1 Tax=Danio rerio RepID=UPI000176135F E=6e-22 s/c=1.30 id=46% cov=99% -IKCPVAGCDGQGHVSGKYTSHRSAGSCPIATKRQKEsplngsafWKVCKQELPHCPLPGCNGLGHANNVFVTHRSLSGCPL- >UniRef50_UPI000180C4A3(627-699:877) PREDICTED: zinc finger (C2H2)-1 n=1 Tax=Ciona intestinalis RepID=UPI000180C4A3 E=4e-16 s/c=1.18 id=35% cov=92% --GCPTPGCSGIGHVKStkfqnNHRKHHSEFGCPYAPKNLNKAVMYDRLANRAPRRCARSTSHTTSNVARRDSIN----- >UniRef50_A7UUJ6(7-65:476) AGAP000875-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=A7UUJ6_ANOGA E=1e-07 s/c=0.98 id=44% cov=76% ILKCPTPGCNGRGHVSAGRNSHRSLSGCPkaaASKAAARELKYQNAARVRQPEPAADSR------------------- >UniRef50_UPI000194C1B3(534-627:813) PREDICTED: l(3)mbt-like 3 (Drosophila) n=1 Tax=Taeniopygia guttata RepID=UPI000194C1B3 E=7e-13 s/c=0.80 id=31% cov=93% --GCPTAGCKGVGHIKrARHIGHHSAVSCPYSEMNLNKESLLPDRLSGempaaSPIPrnrkvetnerstspvindrKCPSPGHVGMKSSPHNRPSG---- >UniRef50_Q5H8Y7(197-271:288) L(3)mbt-like (Drosophila) (Fragment) n=5 Tax=Eutheria RepID=Q5H8Y7_HUMAN E=2e-11 s/c=0.93 id=43% cov=91% --------CSKTGHplqppLGPREPSSASPGGCPplsYRSLPHTRTSKYSFHHRKCPTPGCDGSGHVTGKFTAHHCLSGCPLA # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * 3037 * * 2273 * 752 3693 * * * * * * * * * 1 0 * * * * * * 2200 0 0 L 2 * * * * 5539 * * 2089 * 1089 3292 * * 5173 * * 4940 3171 * * 2 0 * * * * * * 2402 0 0 T 3 4601 * * 4646 * 2005 * * 1879 5095 * 5764 * 4085 3057 3185 4032 * * * 3 0 * * * * * * 2901 0 0 C 4 * 0 * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 2911 0 0 P 5 * * * 4760 * * * * 5182 * * * 265 4976 * 4618 5018 * * * 5 0 * * * * * * 2911 0 0 T 6 * * * * * * * 4315 * 5759 6056 * * * * * 328 3066 * * 6 0 * * * * * * 2911 0 0 P 7 4202 * * * * * * 4691 * 4760 6108 5302 376 * 5535 * * 4707 * * 7 0 * * * * * * 2911 0 0 G 8 * * 4829 * * 231 * * * 4760 5759 * * * 5955 5854 5397 * * * 8 0 * * * * * * 2911 0 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 3029 0 0 D 10 * * 1189 * * * 6133 * 3329 4884 * 3218 * 5956 3171 3483 3709 6228 * * 10 0 * * * * * * 3029 0 0 G 11 4884 * * * * 213 * * 4231 * * * * * * 4316 * * * * 11 0 * * * * * * 3029 0 0 S 12 4591 * * * * * * 2499 4988 3477 3978 4959 * 4426 3757 2227 2710 4086 * 5725 12 0 * * * * * * 2986 0 0 G 13 * * * * * 0 * * * * * * * * * * * * * * 13 0 * * * * * * 3029 0 0 H 14 * * * * * * 0 * * * * * * * * * * * * * 14 79 4231 * 2322 322 * * 3029 1000 0 I 15 4090 * * * 4266 * * 1525 * 3760 5322 * * 5870 6493 4612 * 1419 * * 15 0 * * * * * * 3029 0 0 T 16 * * 5016 * * 4231 * * 1998 5053 * 3716 * 4127 4021 2770 1767 * * * 16 76 4286 * 0 * * * 3029 1194 0 G 17 3815 * * * * 290 * * * * * * 3764 * * 4747 * * * * 17 451 1897 * 736 1324 * * 3029 2154 0 N 18 * * * * * 5660 5618 * 1455 3261 5554 2771 * * 2085 4151 5016 * * * 18 0 * * * * * * 3029 0 0 Y 19 * * * 4231 2306 * 3147 * * * * * * * 4188 5506 * * * 850 19 0 * * * * * * 3029 0 0 A 20 2206 * 5053 5604 5743 4586 * 5918 * 3857 * 4188 3204 * 5473 2667 2039 * * * 20 0 * * * * * * 3029 0 0 S 21 6088 * 5506 * * 2836 3795 * 4652 * * * * * 4233 1553 1959 4684 * 5560 21 0 * * * * * * 3029 0 0 H 22 * * * * * * 133 * * * * * 4848 * * 4231 * * * * 22 0 * * * * * * 3029 0 0 R 23 4231 * * * 5604 * 1875 * * * * * * 5743 846 4761 * * * 4586 23 0 * * * * * * 3029 0 0 S 24 * 6088 * 4761 * * * * 5887 * 5752 * * * 3915 476 2968 * * * 24 0 * * * * * * 3029 0 0 L 25 2058 * * 5473 5956 * * 3648 * 1721 * * 4231 3568 * 4467 4075 3382 * * 25 0 * * * * * * 3029 0 0 S 26 3952 * 5365 * 2905 3694 * * 4746 4960 * * * 4653 * 1171 * 3835 5897 4054 26 14 6648 * 0 * * * 3125 1000 0 G 27 * * * * 5092 420 * * * * * 4087 * * * 2973 * * * 4746 27 35 5365 * 3807 107 * * 3125 1000 0 C 28 * 0 * * * * * * * * * * * * * * * * * * 28 0 * * * * * * 3125 0 0 P 29 * * * * * * * * * * * * 0 * * * * * * * 29 136 3475 * 1335 729 * * 3125 2185 0 L 30 5615 * * * * * 6093 4043 * 2016 * 4686 * * 2550 * 5058 5747 * 1326 30 46 5008 * 1000 1000 * * 3129 1000 0 A 31 973 * * * * * * * 3847 * * * 5903 * 3838 1702 5217 * * * 31 54 5509 6066 3807 107 * * 3130 1000 0 D 32 3495 * 2182 2257 * 5639 * 5303 3237 6402 6269 4326 4900 3680 6252 3662 4876 5811 * * 32 47 * 4952 * * * 0 3347 0 1000 K 33 4337 * 4020 5148 * 7701 * 3667 1546 3567 3573 7090 * 4158 2979 4867 * 4587 * * 33 26 6834 6820 2322 322 * 0 3221 1000 1339 S 34 3238 * * * * * * * 4364 * 5508 1056 3409 * 3191 4250 4830 4291 * * 34 17 6442 * 0 * 1936 437 3222 1000 1448 L 35 5176 * * * * * 3909 4654 3704 1804 3531 * 4060 2802 * 2867 4256 5401 * * 35 20 6178 * 4459 67 0 * 3238 1000 1340 R 36 * * * 5039 * 6970 * 5471 2061 6092 * 2113 4844 5454 2444 4237 3122 5128 * 5985 36 74 4313 * 4330 74 * * 3263 1514 0 N 37 4282 * 5381 2580 * 5192 * * 1369 * * 5092 5164 4751 2712 3643 5985 * * * 37 170 3167 * 3126 176 * * 3263 1663 0 L 38 3473 * 6032 2118 * * * 3851 * 2773 3507 * 4515 4280 6207 4899 3784 5044 3112 * 38 0 * * * * * * 3279 0 0 M 39 4814 * 3851 * * * * 4303 2509 2823 5343 4471 5362 4569 3094 2564 * 3249 * * 39 81 4190 * 3070 183 * * 3502 1367 0 A 40 1467 * 4301 4093 * 5927 * 4486 3530 4322 3999 * 4780 4575 * 5159 4094 3797 * 4974 40 24 5916 * 0 * * * 3532 1000 0 A 41 2998 5620 * 4869 5175 6013 * * 5690 1875 3627 5476 * 3525 * 4788 4565 3188 * 3230 41 0 * * * * * * 3783 0 0 H 42 * 5436 2882 5952 * 6169 2767 * 2267 * * 3311 3777 3190 4495 3566 6919 * * 4788 42 0 * * * * * * 3783 0 0 S 43 2936 * 2232 3146 3549 * 4871 * * * * 5195 5583 3084 4156 2545 5044 * * * 43 60 4625 * 3563 128 * * 3420 1201 0 A 44 3340 5718 4984 2178 * 3435 3986 * 6004 3612 * 5534 4736 2806 3264 6008 4184 * * * 44 116 4317 5222 2987 194 * * 3529 1389 0 D 45 2915 * 3927 2113 * 3761 4929 3557 5024 2818 * * 4178 * 4530 * 5276 3608 * * 45 78 4243 * 2245 342 0 * 4199 1303 1000 L 46 * * * * * * * 4251 4014 1429 4709 3502 2848 4765 4194 3870 4390 4600 * * 46 0 * * * * * * 4356 0 0 K 47 * * * * * 3459 3810 * 1604 * * 5548 * * 1424 3353 5900 * * * 47 148 3356 * 2322 322 * * 3423 1404 0 C 48 2962 370 * * * * * * * * * * * 4887 * 3961 * * * * 48 0 * * * * * * 2734 0 0 P 49 * * * 5352 * * * * * * * * 84 * * * 4968 * * * 49 0 * * * * * * 2734 0 0 T 50 * * * 4887 * * * 3159 * 4424 * * * * 3268 * 634 4075 * * 50 0 * * * * * * 2734 0 0 P 51 4968 * * 6013 * * * * * 5880 * * 308 * 3268 5394 * * * * 51 96 3961 * 4248 78 * * 2734 1000 0 G 52 4887 3268 * * * 406 * * 3961 * * * * * * 5711 5373 * * * 52 0 * * * * * * 2734 0 0 C 53 2625 255 * * * * * * * * * * * * * * * * * * 53 0 * * * * * * 2734 0 0 D 54 * * 1309 * * * * * 4399 * * 2480 3958 * 2575 4045 4235 5385 * * 54 0 * * * * * * 2729 0 0 G 55 * * * * * 465 * * * * * * * * * 1860 * * * * 55 0 * * * * * * 2729 0 0 S 56 * * * * * * * 3748 4005 3737 * * 3958 5278 2534 1496 2815 * * 5118 56 0 * * * * * * 2729 0 0 G 57 * * * * * 198 * * * * * * * * * 2962 * * * * 57 0 * * * * * * 2707 0 0 H 58 * * * * * * 0 * * * * * * * * * * * * * 58 0 * * * * * * 2707 0 0 I 59 4004 * * * 4814 * * 2980 5377 4034 * * * * 5988 4188 2962 1025 * * 59 0 * * * * * * 2707 0 0 T 60 * * * * * 3835 * * 3616 * * 1952 * 5352 4425 3285 1264 * * * 60 0 * * * * * * 2707 0 0 G 61 5647 * * * * 694 * * * * 3835 3937 5352 4969 * 2700 5947 * * * 61 105 3838 * 0 * * * 2707 1352 0 N 62 * * * * * 5647 5352 * 1355 4650 * 1775 * * 3507 3621 6092 4363 * * 62 0 * * * * * * 2707 0 0 Y 63 * * * * 2124 * 3988 * * * * * * * 2596 3385 * 2962 * 1652 63 0 * * * * * * 2707 0 0 A 64 1907 * * 5101 5110 * * * * 3415 * 4351 4070 5376 * 2069 2495 4912 * * 64 0 * * * * * * 2707 0 0 S 65 4287 * 5284 * * 5490 * * 4814 * * * 3835 * 2201 1522 2842 3469 * * 65 0 * * * * * * 2707 0 0 H 66 * * * * * * 198 * * * * * * * 2962 * * * * * 66 0 * * * * * * 2707 0 0 R 67 * * 2962 * 5101 * 2485 * * * * 3835 * 5110 824 * * * * * 67 0 * * * * * * 2707 0 0 S 68 * 5191 * * * * * * 4250 * 4883 * * * 2925 476 4814 * * * 68 0 * * * * * * 2707 0 0 L 69 2919 * * 5367 5896 * * 1936 * 1340 * * 3827 * * * 4661 4045 * * 69 0 * * * * * * 2707 0 0 S 70 * * * * 4603 * * * * 4148 * 2962 * 5357 * 564 * * 4809 4732 70 0 * * * * * * 2707 0 0 G 71 * * * * * 135 * * * * * * * * * 3480 * * * * 71 0 * * * * * * 2367 0 0 C 72 * 0 * * * * * * * * * * * * * * * * * * 72 0 * * * * * * 2242 0 0 P 73 * * * * * * * * * * * * 0 * * * * * * * 73 0 * * * * * * 2242 0 0 R 74 * * * * * * * 2165 * 1064 5173 * * * 2397 * * 5015 * 4313 74 0 * * * * * * 2213 0 0 A 75 0 * * * * * * * * * * * * * * * * * * * 75 0 * * 0 * * * 2005 0 0 //