HHsearch 1.5 NAME c2mewA_ FAM FILE c2mewA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mewA_.a3m DATE Sat Nov 9 08:25:31 2013 LENG 82 match states, 82 columns in multiple alignment FILT 77 out of 81 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4405 1.3221 SEQ >ss_dssp CCCCCEEEEEEEESSHHHHHHHHHHHHHHHHHSSSEEEEEEECCCBTTBEEEEEEEESCCHHHHHHHHHSCCCTTCEEECCC >sa_dssp EEDEEDCEBDADBEDDEDACEBAEDBCDCAEECEAECDDDDDDEDEEECCBCBACADDCCEEAEDBCEEDECDEDBDCCEEE >ss_pred CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEC >ss_conf 9886189999997278899999999999998529843126579832057678888756998999997543079983899889 >Consensus xxxxqkirIkLxSxdxxxLexxxxxixxxakxxgxxvxGPvpLPTExRtHkRlIdixxxxxxtvxxlxxxxlpxgVxveixi >c2mewA_ SMGGQKIRIKLKAYDHELLDESAKKIVEVAKSTNSKVSGPIPLPTESRVHKRLIDIIDPSPKTIDALMRINLPAGVDVEIKL >UniRef50_A9VB28(103-200:347) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VB28_MONBE E=2e-05 s/c=0.52 id=32% cov=91% --------IRMEGYNHAVLDSYVTFLERAARELGISCTGRIPLPTHKRretvlksphvykqhrvqfdiaTHARLFQMRNLSHSTLNTYLTYVqhhLPPGV ATRVKL >UniRef50_A9J5L8(15-111:115) Putative ribosomal protein S20 (Fragment) n=1 Tax=Pomphorhynchus laevis RepID=A9J5L8_9BILA E=4e-05 s/c=0.51 id=34% cov=93% ----QCIRITLSSSNVTSIEKVANALLRSAKANNLRIRGPVPLPvkilrittrktpcgegsktwdhFQMRIHKRLIDLYCPQEQ-VQGLQSIIIEPDVIS EV-- >UniRef50_Q2S4M9(137-234:238) Ribosomal protein S10p/S20e, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4M9_SALRD E=4e-05 s/c=0.50 id=26% cov=93% ------LQIRLSSTDHQMVDRAVRQITQFVSDRQPRAPVAVPLPVGKKaaaderqgrtngppsrdesfsqhIHHRAIEMWTAGPKLVAQLGQVQLPEAVD VTVR- >UniRef50_A4V822(11-107:119) Putative 30S ribosomal protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V822_PSEFS E=3e-06 s/c=0.55 id=35% cov=91% -------YIVIDGLDHPIVLQTAKTIKAALSRTqGVKVRGPLALPTVRRRHiilrealsngsrglycakaKRIrnvLLVESPTSESIMSLVALPLPATVN IKIE- >UniRef50_A0BD80(14-120:123) Chromosome undetermined scaffold_10, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0BD80_PARTE E=9e-10 s/c=0.61 id=28% cov=98% --QTKKIRMIVTSRSAQDLENFTNQVIEktrgIQRDQGAQVvfKGPVRMPTkhlkmtvrkspcgegsktwdrfEMRIHKRVIDFQCTLP-TFKDITNFKI GPGINVELNV >UniRef50_B6JWT5(81-184:240) 30S ribosomal protein S10 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWT5_SCHJY E=2e-09 s/c=0.61 id=31% cov=76% ------AQIMFKSYELSKLEFFADFAVRCAYYMNIPVRGPTPLPkkiqrwtlvrspfvhkasqenFERITYSRLLRLFNVNSETLEVL------------ --- >UniRef50_Q4D6H7(11-113:117) Ribosomal protein S20, putative n=4 Tax=Trypanosomatidae RepID=Q4D6H7_TRYCR E=1e-09 s/c=0.62 id=24% cov=95% ----QRVLVKMTSRNAKAVENVMTELLLHARNEKVVLRGPVRLPTrtlkvttrktpcgngtntwdtyELKIYKRLVELRAPT-ELVKKITSFPIDAGVDV AITI >UniRef50_B0DK32(13-95:111) Predicted protein (Fragment) n=2 Tax=Basidiomycota RepID=B0DK32_LACBS E=6e-08 s/c=0.71 id=31% cov=76% ----------FRSHHVRLLEFFTHFASHAASSLGIPISKVARLPTQrtlwtvprspfahkksqenfdRRVHKRAIKAWDADPEVVDRwLMYLR------- ---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1000 0 0 M 2 * * * * * * * * * * 0 * * * * * * * * * 2 0 * * * * * * 2229 0 0 G 3 994 * * 4179 * 4941 * * * * * 3173 * 2404 * 3831 * 4648 * * 3 0 * * * * * * 3000 0 0 G 4 4945 * 5180 * * 2942 * * 2773 * * 2054 * 4510 3440 3456 2354 * * * 4 0 * * * * * * 3204 0 0 Q 5 * * * 2879 * * * * 2503 * * * 5720 959 3763 * 4262 * * 5127 5 0 * * * * * * 4016 0 0 K 6 * 5246 4732 4524 * * * * 749 * * 4665 * * 2750 4754 5133 5833 * 5247 6 0 * * * * * * 4174 0 0 I 7 2696 * * * * * * 825 * 2803 6141 * * * * * * 3014 * * 7 31 5552 * 1000 1000 * * 4569 1000 0 R 8 * * * 4759 * * * * 3904 5574 * * * 3979 508 4899 5670 * * 4170 8 0 * * * * * * 4639 0 0 I 9 * * * * * * * 445 * 2772 5292 * * * * * * 3423 * * 9 0 * * * * * * 4876 0 0 K 10 * * * 5810 * * * 5292 1513 * 5986 5529 * 3200 2189 5032 2444 5236 * * 10 0 * * * * * * 4876 0 0 L 11 * * * * 4004 * * 2673 * 545 3828 * * * * * * 5305 * * 11 0 * * * * * * 4906 0 0 K 12 6483 * 5279 4183 * * 5423 * 2112 5357 * * * * 2099 3538 2195 5840 6029 4102 12 0 * * * * * * 4906 0 0 A 13 2489 6124 * * * 2869 * * * * * * * * * 612 5933 * * * 13 0 * * * * * * 4954 0 0 Y 14 6202 * * * 2059 * 5280 * 4361 5288 * 5374 * * 4142 5237 2483 5859 * 1544 14 0 * * * * * * 4954 0 0 D 15 * * 1299 3565 5238 * 4493 * 4170 * * 2537 * * * 2340 * * 6276 * 15 0 * * * * * * 4954 0 0 H 16 2929 5562 * * 5374 * 1858 6502 5055 3304 * 4763 4635 7081 * 3987 5404 2207 * 5845 16 0 * * * * * * 4954 0 0 E 17 4163 * 5869 2612 * 5627 6011 5744 2412 * * 5043 3631 3304 2041 4235 6292 * * * 17 0 * * * * * * 4954 0 0 L 18 4109 * 4045 6643 * 5933 3956 3643 3785 1972 4860 3670 5017 4316 * 3402 5091 3942 * * 18 0 * * * * * * 4954 0 0 L 19 * * * * * * * 3165 * 577 5551 * * * * * * 2345 * * 19 0 * * * * * * 4954 0 0 D 20 6184 * 1548 1319 * * 5627 5933 5163 5288 * 3211 * 4465 * * * * * * 20 0 * * * * * * 4954 0 0 E 21 3795 * 4526 3230 2834 6022 * 5875 3312 4863 6393 3739 * 3298 3324 3113 5255 5238 * 6184 21 0 * * * * * * 4954 0 0 S 22 2489 4136 * * 2202 * * * * 5963 * * * * * 2235 4805 2146 * 4120 22 0 * * * * * * 4954 0 0 A 23 1968 1856 * * * * * * * 5574 5972 * * * * 3563 2564 2494 * * 23 0 * * * * * * 4954 0 0 K 24 4023 * 1985 3620 * 4263 5280 * 2321 * * 3595 * 4685 3267 4194 4429 * * * 24 0 * * * * * * 4954 0 0 K 25 6292 * 4405 2652 2043 6202 * * 2122 * 4864 4120 * 2735 * * 4243 * * * 25 0 * * * * * * 4954 0 0 I 26 2632 * * * 4703 * * 848 * 2600 5574 * * * * * * 4087 * * 26 0 * * * * * * 4954 0 0 V 27 5574 6254 * 5479 5276 * * 2042 3143 2668 5101 * * 4144 5374 5280 4582 2139 * * 27 0 * * * * * * 4954 0 0 E 28 4435 * 3369 2156 * 5101 5280 * 4374 4631 4495 4195 * 3566 2092 4370 * 5458 * * 28 36 5332 * 2000 415 * * 4954 1000 0 V 29 1640 6164 * 5562 4860 4986 5972 2177 4442 4891 * 4580 * * 6124 4252 2903 5722 * * 29 0 * * * * * * 4954 0 0 A 30 829 * * * * 3873 * 4267 * 3608 * 5744 * 5332 * 5236 5869 2758 * * 30 0 * * * * * * 4954 0 0 K 31 6327 * 5859 4291 * * * * 1321 * * 4866 * 5541 3189 2808 4632 * * 2553 31 0 * * * * * * 4954 0 0 S 32 4466 * 3199 3211 * 7043 * * 2912 * * 3324 5886 4138 2445 3841 * * * 2553 32 25 5886 * 1000 1000 * * 4954 1000 0 T 33 * * * 5972 * 6184 6230 5372 4672 2102 3838 3866 * 4419 4860 4488 1381 * * 6327 33 91 4646 5574 0 * * * 4954 1665 0 N 34 * * * 4052 * 1014 * * 3843 5487 * 2079 * 4315 5227 4684 * * * * 34 33 5452 * 3459 138 0 * 4939 1000 1000 S 35 2152 * * 5886 * 5125 * 2281 * 2550 6529 * 4860 * * 3798 4864 2452 * 5744 35 0 * * * * * * 4954 0 0 K 36 5397 5933 5449 3956 * * 5744 6796 2549 4540 * 4453 2565 3288 2675 3986 5869 3695 * * 36 0 * * * * * * 4954 0 0 V 37 3305 4661 * * 5515 * * 2458 5277 3052 4795 * * * * 5541 4744 1272 * * 37 36 5332 * 1000 1000 * * 4954 1000 0 S 38 5503 6813 7092 4889 5311 * 6393 5541 2023 * 6276 * 4860 * 2266 1846 4077 5450 * 6954 38 31 * 5574 * * * * 4954 0 0 G 39 * * * * * 93 * * 5217 * * * * * * * * 4806 * * 39 0 * * * * 0 * 4939 0 1000 P 40 4860 * * * * * * * 5574 * * * 262 * 4425 * * 3958 * * 40 0 * * * * * * 4954 0 0 I 41 5280 * * * * * * 1375 4763 5288 6393 * * * 6254 * 4398 1140 * * 41 0 * * * * * * 4954 0 0 P 42 4418 5574 5374 * 5797 * * * * * 5055 * 655 * 2297 * 5541 * * * 42 0 * * * * * * 4954 0 0 L 43 * * * * 5934 * * 4849 * 286 3287 * * 5238 * * * * * * 43 0 * * * * * * 4954 0 0 P 44 * * * 6055 * * * * 5238 * * * 61 * * * * * * * 44 310 2370 * 4406 70 * * 4954 3121 0 T 45 * * * * 2643 * * * * * * 6230 * * * * 428 4327 * 4906 45 1372 704 * 4409 70 * * 4954 4203 0 E 46 * * * 413 * 4860 4992 * 3566 * * * * 3778 * * * 5288 * * 46 38 5269 * 4392 70 * * 4954 1000 0 S 47 * * * * * * * 2500 3556 3253 2212 * * 6915 1774 4297 5178 4711 * * 47 29 5674 * 4440 68 * * 4949 1512 0 R 48 * * * * * * 5509 3506 3409 * * * * * 409 5853 * 5301 * * 48 155 3298 * 4245 78 * * 4947 2620 0 V 49 * * * 5108 * * * 1482 * 5916 6004 * * * 4545 5785 1175 3695 * * 49 33 5473 * 4392 70 * * 4947 1434 0 H 50 * 6738 * * 6419 * 416 * * 4407 5361 * * * * 5022 * * * 2974 50 38 5282 * 4248 78 * * 4947 1000 0 K 51 4727 * * * 5785 5234 3827 * 839 6514 * 6757 * 5041 2522 3984 * * * * 51 0 * * * * * * 4947 0 0 R 52 * 5606 * * * * * * 5432 * * * * * 64 * * * * * 52 0 * * * * * * 4947 0 0 L 53 4030 * * * 5432 * * 2291 5234 890 6246 * * * * * * 3080 * 6203 53 38 5282 * 1585 585 * * 4947 1000 0 I 54 * * * * 5467 * * 789 * 1904 6514 * * * * * * 3051 * * 54 13 * 6849 * * * * 4947 0 0 D 55 * * 1059 3117 * 6128 * 3816 4312 5259 * 5987 * 3005 4284 5929 * 5547 * 6202 55 0 * * * * 0 * 4953 0 1000 I 56 4762 * * * 4109 * * 1310 * 1816 3460 * * * * * * 2976 * * 56 122 6446 3847 0 * * * 4947 1000 0 I 57 6372 * * 3916 6059 * 3417 4188 3094 4163 6576 5156 5695 3600 3567 4572 4913 4526 3253 2867 57 61 6209 5161 1585 585 0 * 4902 1000 1968 D 58 4242 4185 2008 5824 * 6106 * * * 6404 * 2121 5844 4680 6408 2748 3090 * * 4827 58 75 * 4295 * * 0 * 4935 0 1641 P 59 2184 5712 * 5821 4762 3350 * * * 3133 * 3780 1717 * * 5317 3965 5151 * * 59 20 * 6189 * * 0 * 4898 0 2035 S 60 * * 2762 * * 4814 4344 * 4458 5302 * 2931 * 4762 * 2217 1944 4212 * * 60 100 5846 4327 1000 1000 0 * 4945 1000 1000 P 61 2648 * 4012 2708 * * 5407 * 5014 * * 4647 1468 4544 * 2981 * * * * 61 57 * 4697 * * 0 * 4923 0 1701 K 62 4755 * 3140 1740 * * 5592 * 2356 6224 * 5825 * 3018 3549 4779 5516 4807 * * 62 75 * 4298 * * 0 * 4909 0 1549 T 63 3236 * * * * * * 4922 6397 3417 5519 * 5481 * * 4509 981 2811 * 5794 63 22 * 6036 * * 0 * 4909 0 1863 I 64 4344 * * * 4476 * * 1881 * 2641 4117 * * * * * 6252 1310 * * 64 49 4903 * 512 1744 0 * 4940 1601 1000 D 65 4821 * 1745 3331 * * 5916 * 2603 * 5282 4591 * 2648 3499 4131 6206 * * * 65 0 * * * * * * 4947 0 0 A 66 2190 * 5307 5905 5435 6234 * 5186 3755 4354 3771 * * 2752 4000 3091 3242 4478 * * 66 41 5156 * 0 * * * 4921 1000 0 L 67 * * * * 3817 * * 2030 * 796 5694 * * * * * * 4798 * 4243 67 0 * * * * * * 4813 0 0 M 68 * * * * * 4739 * * 4193 3153 1329 5030 * 5763 * 4079 2121 4073 * * 68 0 * * * * * * 4747 0 0 R 69 4639 * * 3999 * 4466 4989 * 2758 5030 * 3955 5414 2745 2450 3360 3381 * * 5130 69 23 5967 * 1585 585 * * 4747 1000 0 I 70 5556 * * * 2965 * * 1794 * 1608 * * * * * 5170 5502 3228 5579 4135 70 42 5112 * 1585 585 * * 4747 1000 0 N 71 5563 * 2648 3751 * * * 5743 3901 * * 3121 3594 3081 3533 3662 3392 3977 * 5694 71 44 5054 * 1585 585 * * 4653 1000 0 L 72 * * * * 5185 * * 1940 5886 968 4478 * 5503 * * * * 3095 * * 72 0 * * * * * * 4594 0 0 P 73 4332 * 3740 2960 * 5072 * * * * * * 536 * * 5185 * * * * 73 0 * * * * * * 4594 0 0 A 74 1944 * 3546 3122 6000 * * * 5407 * * 5281 1849 * * 3359 3750 * * 5309 74 0 * * * * * * 4594 0 0 G 75 4162 * 3235 5407 * 460 * * 5886 * * 5802 * * * 6796 4523 * * * 75 0 * * * * * * 4594 0 0 V 76 4989 * * * * * * 3536 * * * * * * * * * 181 * * 76 0 * * * * * * 4594 0 0 D 77 4794 * 1819 2109 4927 * 5481 4655 4830 * * 2886 * 4932 * 4115 6151 * 5028 4378 77 0 * * * * * * 4528 0 0 V 78 * 5580 * * 4241 * * 1394 * 4764 * * * * * 5683 4794 1141 * * 78 0 * * * * * * 4528 0 0 E 79 5468 * 3203 799 * * * * 4605 6125 * 4311 * 4876 4300 4535 4050 * * * 79 0 * * * * * * 4528 0 0 I 80 5259 5441 * * 5878 * * 1138 * 2791 5372 * * * * * * 1685 * * 80 0 * * * * * * 4528 0 0 K 81 5374 * * 2656 * * * * 1467 * * 4892 * 3315 3599 3591 3352 4602 * 5906 81 0 * * * * * * 4368 0 0 L 82 * * * * * * * 1841 * 1410 3327 * * * * * * 2030 * * 82 0 * * 0 * * * 4090 0 0 //