HHsearch 1.5 NAME c2mbyA_ FAM FILE c2mbyA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2mbyA_.a3m DATE Sat Sep 28 08:21:25 2013 LENG 46 match states, 46 columns in multiple alignment FILT 50 out of 54 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4596 1.3247 SEQ >ss_dssp CHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHCSCSSCSCC >sa_dssp EEEDDEEEEDEEEEDDEEDDEEECDEEDCDEEDDEEDEEEEEEEEE >ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >ss_conf 9723066899999999999999999999999999999920889999 >Consensus gxxxnFYrFQxRExKkxxxxeLrkkFeeDkxrixxmKxxRrFkPyx >c2mbyA_ GPEADFYRFQVRERKKQEINQLLSKFKEDQERIKVMKAKRKFNPYT >UniRef50_Q7PXY6(202-243:243) AGAP001656-PA n=4 Tax=Culicidae RepID=Q7PXY6_ANOGA E=4e-05 s/c=1.17 id=37% cov=93% ---KNFYTFQIRESKKNDIISLRKKYDRDLKKMEQIKKAKRFKPY- >UniRef50_Q55P14(362-402:402) Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q55P14_CRYNE E=1e-09 s/c=1.56 id=40% cov=91% ----DFYKFQALDRKRQDLAELRQKFEHDKARVEELKKSRRYKPY- >UniRef50_Q0CWT1(565-606:607) Meiotic recombination protein DMC1 n=22 Tax=Dikarya RepID=Q0CWT1_ASPTN E=1e-07 s/c=1.37 id=46% cov=89% ----DFYRFQSREKRKMRQNELLKRFDEDKKRLEELKRRKgKLRP-- >UniRef50_B6K4Q5(191-235:235) Gastric cancer antigen Zg14 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4Q5_SCHJY E=6e-10 s/c=1.45 id=46% cov=100% GIHHNFYRWQVREEKKKKLNDLVRKFEQDKQRIQQIRESRRFKPY- >UniRef50_A8BSF6(227-270:275) Putative uncharacterized protein n=2 Tax=Giardia intestinalis RepID=A8BSF6_GIALA E=9e-07 s/c=1.25 id=31% cov=98% -VEKGFYKFQQIEKKQSDLEKLRRRHAADKEVIERMRCAGRLNPF- >UniRef50_B5YP47(571-615:615) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YP47_THAPS E=1e-11 s/c=1.58 id=46% cov=100% GEFTDFYRFQRRDEKKKEVQDLKARFEEDLEKVRKMKEERAFRPF- >UniRef50_C5LR14(276-313:316) Putative uncharacterized protein n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LR14_9ALVE E=2e-06 s/c=1.41 id=46% cov=85% ----DFYRFQHRERKRAEFIEEQKRNTQDQETVSAMKKRRLF---- >UniRef50_C1EBY3(247-289:290) Predicted protein n=2 Tax=Micromonas RepID=C1EBY3_9CHLO E=3e-10 s/c=1.54 id=41% cov=96% -IRENFYRFQQREKRRNELFELKRAFAADKDRVAKLKASRKFKP-- >UniRef50_Q23314(231-269:270) Ribosomal RNA-processing protein 7 homolog n=3 Tax=Caenorhabditis RepID=RRP7_CAEEL E=1e-06 s/c=1.39 id=38% cov=87% -----YYTFQIKKNRQEKAQELLKKFEEDRKRITQLKQARNFKP-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1852 0 0 P 2 * * * 2745 * * * 918 * * * * 2751 * * * * 2532 * * 2 0 * * * * * * 2529 0 0 E 3 * * 3091 1269 2972 * 2178 * * * * * * * 3070 * * * * * 3 0 * * * * * * 2588 0 0 A 4 3070 * * 2941 * * 4085 * 1199 * * * * 3184 * 3538 4058 * * * 4 0 * * * * * * 3008 0 0 D 5 * * 1176 5564 * 3838 * * * * * 1101 * * * * * * * * 5 0 * * * * * * 3436 0 0 F 6 * * * * 94 * * 5083 * * * * * * * * * * * 4890 6 0 * * * * * * 3451 0 0 Y 7 * * * * * * * * * * * * * * * * * * * 0 7 0 * * * * * * 3451 0 0 R 8 3978 * * * * * * * 2894 * * * * 6355 823 5016 2486 6028 * * 8 0 * * * * * * 3451 0 0 F 9 * * * * 148 * * * * * * * * * * * * * 3872 5083 9 0 * * * * * * 3451 0 0 Q 10 * * * 5441 * * * * * * * * * 34 * * * * * * 10 0 * * * * * * 3451 0 0 V 11 5422 * * * 5322 5635 3352 2328 4074 3014 6312 4572 * 3531 3639 4570 3592 3252 * * 11 0 * * * * * * 3451 0 0 R 12 5539 * * * * * 6084 4559 2604 5422 * * * * 447 * * * * * 12 0 * * * * * * 3451 0 0 E 13 * * 3830 293 * * * * 4890 * * 5665 * 4054 * * * * * * 13 0 * * * * * * 3451 0 0 R 14 3690 * * 4778 * * * 4591 1719 * 6032 4890 * 4628 2718 2381 3645 * * 5198 14 0 * * * * * * 3451 0 0 K 15 * * * * * * 5685 * 532 * * * * 3789 2206 * * * * * 15 0 * * * * * * 3451 0 0 K 16 * * * * * * * 4017 1325 * 3482 * * 3715 1421 * * * * * 16 0 * * * * * * 3451 0 0 Q 17 4786 * 4067 1820 * * * * 2802 5981 5681 2842 * 2905 4577 3296 5296 * * * 17 0 * * * * * * 3451 0 0 E 18 4126 * 3452 1629 * * 3266 * 3089 * * 3410 * 3159 4377 * 5257 5249 * * 18 18 6373 * 5248 38 * * 3451 1000 0 I 19 4890 * * 4572 3422 * * 1954 * 1418 3753 * * 3584 * * * 4609 * * 19 0 * * * * * * 3451 0 0 N 20 1850 * 5103 3925 5920 4367 * 3147 5296 3904 3353 3175 * 3631 * * 4530 5323 * * 20 0 * * * * * * 3451 0 0 Q 21 3832 * 2385 1202 * 4699 * * 4559 * 4961 * * 3546 * 4304 5296 5103 * * 21 0 * * * * * * 3451 0 0 L 22 * * * 4786 * * * * * 167 4611 * * * * * * 4965 * * 22 0 * * * * * * 3451 0 0 L 23 5643 * * * * * * * 3744 2288 * * * 2992 891 * * 4807 * * 23 0 * * * * * * 3451 0 0 S 24 3647 * * 4186 * * 5643 * 1347 * 6373 4844 * 3204 2283 3967 5198 * * * 24 0 * * * * * * 3451 0 0 K 25 4365 * * * * 6032 * * 657 * * * * 5322 2080 4628 * * * * 25 0 * * * * * * 3451 0 0 F 26 * * * * 248 * 4559 * * 4965 * 4786 * * * * * * 5539 5286 26 0 * * * * * * 3451 0 0 K 27 3458 * 3964 555 * * * * 3513 * * * * 4628 * * 4786 * * * 27 0 * * * * * * 3451 0 0 E 28 3108 * 4802 779 5643 * 5422 * * 4065 * 5723 * 3404 5286 * * 5417 * * 28 0 * * * * * * 3451 0 0 D 29 * * 60 * * * * * * * * * * * * 4628 * * * * 29 0 * * * * * * 3451 0 0 Q 30 * * * 4965 * * * * 709 3783 * * * 3014 2646 * * * * * 30 0 * * * * * * 3451 0 0 E 31 3588 * 5086 2136 * * * * 1452 5083 * * * 2783 3314 5723 * * * * 31 0 * * * * * * 3451 0 0 R 32 4965 * * * * * * * 1326 5296 * * * * 1105 * 4786 4559 * * 32 0 * * * * * * 3451 0 0 I 33 * * * * * 5249 * 1155 * 3875 5286 * * 5417 * * * 1295 * * 33 0 * * * * * * 3451 0 0 K 34 2632 * 5296 1522 * * * 5417 3598 * * 4628 * 2793 4267 3708 4449 * * * 34 0 * * * * * * 3451 0 0 V 35 2686 * 4944 3593 * 4801 * * 2993 2885 5002 * * 2171 3413 * 4782 4353 * * 35 38 5249 * 1000 1000 * * 3451 1000 0 M 36 * * * * * * * 4225 * 1646 874 * * * 5322 * * 5103 * 5198 36 0 * * * * * * 3451 0 0 K 37 * * * * * * * * 554 * * * * * 1788 * 5094 * * * 37 0 * * * * * * 3417 0 0 A 38 1684 4466 * 2017 * 4651 * * 2518 5910 * * * 3580 4795 5304 * 5612 * * 38 0 * * * * * * 3417 0 0 K 39 1745 * * 3793 * 6329 * * 2874 * 4621 6247 * 3873 2602 2551 5428 * * * 39 0 * * * * * * 3417 0 0 R 40 5223 * * * 5266 3757 * * 3396 * * 4226 * * 464 * * * * * 40 121 3633 * 0 * * * 3417 1666 0 K 41 5458 * * * * * * * 1456 4610 * 3710 * 4312 1224 * 5868 * * * 41 0 * * * * * * 3309 0 0 F 42 * * * * 268 * * * * 3894 * * * * * * * 4360 * 4229 42 0 * * * * * * 3309 0 0 N 43 * * * * * * * * 918 * * 3383 * * 1505 * * 5484 * * 43 0 * * * * * * 3253 0 0 P 44 * * * * * * * * * * * * 0 * * * * * * * 44 0 * * * * * * 3223 0 0 Y 45 * * * * 1222 * * * * * * * * * * * * * * 807 45 0 * * * * * * 3043 0 0 T 46 * * * * * * * * * * * * * * * * 0 * * * 46 0 * * 0 * * * 1000 0 0 //