HHsearch 1.5 NAME c2majC_ FAM FILE c2majC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2majC_.a3m DATE Sat Jan 18 08:14:57 2014 LENG 82 match states, 82 columns in multiple alignment FILT 16 out of 20 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4619 0.6045 SEQ >ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >sa_dssp EDEEDEEEEDEDDEEEDEEEDCDEECDDECDDDCEEECEEECEDDDEEBDDEDEEDDEDDDEDDDDEEEEDDDDDDEECEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9267899999999999999999999999964115899908999999999999999999999999999999999999996159 >Consensus xxxxexsrxxxxeqElexvrxxLxxAExxLexxxxwxxPxxLQxwLqxTxExExkxxxxKrqxAekqlxxAkexxeKikKKr >c2majC_ GSHMASSRQKYAEEELEQVREALRKAEKELESHSSWYAPEALQKWLQLTHEVEVQYYNIKKQNAEKQLLVAKEGAEKIKKKR >UniRef50_Q9N379(246-330:530) Mammalian stromal interaction molecule-1 n=5 Tax=Caenorhabditis RepID=Q9N379_CAEEL E=0.0003 s/c=0.54 id=32% cov=96% ----ERSKRSISDgvvnhTEMENLRVQLEEAERRLEANSNGSqAPLALQPLLRRTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQ >UniRef50_A7RFY6(246-326:383) Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RFY6_NEMVE E=6e-20 s/c=1.21 id=46% cov=100% GTKEQLQRLYIAEQELMQVRKALRKAERELE-YRSWKAPEELAQWLHITYTKESRHFQMKRTQALKQMTEAKDACDRIRKKR >UniRef50_B0WPD8(404-476:589) Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0WPD8_CULQU E=3e-19 s/c=1.32 id=45% cov=90% --------LQQLKQEVEMLRSELSRAEVEINDH-CWTPPQGLQAWLQLTFELENKHHIRKRIQAEKQLMSAREACEKLKKKR >UniRef50_UPI00019242E1(409-487:788) PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019242E1 E=7e-16 s/c=1.07 id=34% cov=98% --EEDKIKLSMIEQELSDVRLQLINAQKQLGS-AQIKSPKMLQKYLVMTYKKETKHFLQRKQMALNQMKEAKEACAKVSKSR >UniRef50_A8Q7C2(225-302:590) Putative uncharacterized protein n=1 Tax=Brugia malayi RepID=A8Q7C2_BRUMA E=1e-09 s/c=0.82 id=35% cov=94% ----QSSRGAAENEQVETLKSQLMEAERLLE--NSGTAPLALQPLLRRTCELEVSYIGQQRMECIAEMREAIEHIDKLRKKQ >UniRef50_C7TYB3(391-432:612) Stromal interaction molecule 1 n=1 Tax=Schistosoma japonicum RepID=C7TYB3_SCHJA E=4e-09 s/c=1.49 id=37% cov=52% ----------------------------------------ELKYWLQVTYELEIKRYCEKRMKAEKKLDFARQSCKRFMRKR >UniRef50_UPI000180C6A4(303-378:700) PREDICTED: similar to GK16254 n=1 Tax=Ciona intestinalis RepID=UPI000180C6A4 E=1e-13 s/c=1.01 id=35% cov=83% --------------ELADVKQALEQAEERLKLNdKHWSPPTRLLTCLKTTYQVEMKLHEVKRHTAHKKVEQAKAQFQKMKKK- >UniRef50_C3YZK5(189-460:698) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YZK5_BRAFL E=3e-72 s/c=0.31 id=55% cov=100% NTETEINRLRIAEEELYQVRQALRKAEKELE-RRSWHPPTSLQQWLQLTYELELKNYSNKRLAAETQFAEAKESCEKIRKKR >UniRef50_UPI000194E524(177-418:634) PREDICTED: stromal interaction molecule 1, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194E524 E=1e-101 s/c=0.34 id=66% cov=90% --------RLHRWQQIELLCGFHIVTNPGLHSLAS-AAPEALQKWLQLTHEVEVQYYNIKKQNAEKQLLVAKEGAEKIKKKR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 291 * * * * * 2453 * * * * * * * * 1 0 * * * * * * 1837 0 0 S 2 1134 * * * * * * * * * * * * * * 2797 1320 * * * 2 0 * * * * * * 1837 0 0 H 3 * * * 465 * * 3141 * 2624 * * * * * * * * * * * 3 0 * * * * * * 2143 0 0 M 4 * 2105 * 1397 * * * * * * 3141 2904 * * * * 2829 * * * 4 0 * * * * * * 2143 0 0 A 5 3726 * 2675 975 * * * * * * * * * 1948 * * * * * * 5 0 * * * * * * 2673 0 0 S 6 * * * * * * * 3304 2675 1832 * * * * 2064 2171 * * * * 6 0 * * * * * * 2673 0 0 S 7 * * * * * * * 2675 * * * 3304 * 3151 * 668 * * * * 7 0 * * * * * * 2673 0 0 R 8 * * * * * * * * 1725 * * * * * 520 * * * * * 8 0 * * * * * * 2673 0 0 Q 9 * * * * * 3094 * * * 1098 * * * 2984 1789 * * * * * 9 0 * * * * * * 2903 0 0 K 10 3094 * * * * * * 3780 3095 3321 * * * 2561 3636 2003 * * * 3418 10 0 * * * * * * 2903 0 0 Y 11 3094 * * * * * 3321 1751 * * 2985 * * 3273 * * * * * 1967 11 0 * * * * * * 2903 0 0 A 12 1110 * * 3167 * * * 3070 * 3364 * * * * 3476 3069 * * * * 12 0 * * * * * * 2929 0 0 E 13 * * 3125 866 * * * * 2732 * * 3263 * * * * * * 3605 * 13 176 3125 * 2322 322 * * 2914 1000 0 E 14 * * * 1893 * * * * 3771 * * * * 881 * * 3125 * * * 14 0 * * * * * * 2914 0 0 E 15 * * * 379 * * * * * * * * * 2563 * 4012 * * * * 15 0 * * * * * * 3095 0 0 L 16 * * * * * * * 2800 * 750 3325 * * * * * * 2626 * * 16 0 * * * * * * 3095 0 0 E 17 3258 * * 864 * * 4012 * * * 3791 * * * * 3285 * 4345 * 4053 17 0 * * * * * * 3095 0 0 Q 18 * * 1894 * * * * * * 3705 2875 3325 * 1619 * * 3433 * * * 18 82 4181 * 0 * * * 3095 1000 0 V 19 * * * * * * * * * 1097 * * * * * * * 909 * * 19 0 * * * * * * 3095 0 0 R 20 * 3705 * * * * * * 2343 * * * * 4012 590 * * * * * 20 0 * * * * * * 3095 0 0 E 21 * * * 3314 * 3705 * * 3042 3285 4317 3902 * 2601 * 2626 4181 3325 * * 21 0 * * * * * * 3095 0 0 A 22 1142 * * 2966 3786 * * * * * * * * 1803 4067 * * * * * 22 0 * * * * * * 3108 0 0 L 23 * * * * * * 3786 * * 109 * * * * * * * * * * 23 0 * * * * * * 3108 0 0 R 24 * * * 2333 * * * 2512 2437 * 3482 * * 4067 2604 2966 * * * * 24 0 * * * * * * 3108 0 0 K 25 * * * 2444 * * * * 1635 * * 3282 * 3263 2219 * * 3786 * * 25 0 * * * * * * 3108 0 0 A 26 109 * * * * * * * * * * * * * * * 3786 * * * 26 0 * * * * * * 3108 0 0 E 27 * * * 386 * * * * * * * 3786 * 2622 * * * * * * 27 0 * * * * * * 3108 0 0 K 28 * * * 2609 4033 * * * 1606 * * * 3786 * 1703 * * 3902 * * 28 0 * * * * * * 3108 0 0 E 29 * * 4492 1331 * 3786 * * 4253 3482 * * * 2785 2333 * * * * * 29 89 4067 * 3807 107 * * 3108 1000 0 L 30 * * * * 4459 * * 3902 * 432 3527 * * * 4067 * * * * * 30 0 * * * * * * 3108 0 0 E 31 * * * 983 * 3282 3786 * 3263 * * 3902 * 3527 * * * 4033 * * 31 355 * 2196 * * * * 3108 0 0 S 32 2817 * 2567 * * * * * * 2414 * * * * 3850 1405 4190 * * * 32 198 * 2960 * * 669 1430 2878 0 1868 H 33 * * * 4284 * * 3005 * * 2278 * 1549 * 4040 3029 * * * * 3428 33 577 3012 2282 0 * 0 * 2800 1000 1701 S 34 1886 * * * * * 3826 * 3099 * * 3203 * * 2214 2197 * * * * 34 0 * * * * 668 1431 2942 0 1606 S 35 * 2875 * * * * 3258 * * * * 3325 * 3285 3094 1186 * * * * 35 194 * 2989 * * 0 * 3095 0 1000 W 36 * * * * * 2335 * 3139 * * * * * * * * * * 539 * 36 0 * * * * 980 1020 3071 0 1330 Y 37 2854 * * * * * 4040 * 2468 * * * * 3995 * 1480 2645 * * 4673 37 248 2661 * 3147 173 0 * 3113 1623 1000 A 38 1242 * * * * * * * * * * * 1547 * * 3282 * 2919 * * 38 0 * * * * * * 3108 0 0 P 39 * * * * * * * * * * * * 0 * * * * * * * 39 0 * * * * * * 3108 0 0 E 40 * * 4459 1403 * * * * 3282 2444 * * 4033 3902 * * 2627 * * * 40 0 * * * * * * 3108 0 0 A 41 1323 4315 * 2902 * 3988 * * * * 3301 * * 4169 3363 3335 * * * * 41 0 * * * * * * 3183 0 0 L 42 * * * * * * * * * 0 * * * * * * * * * * 42 0 * * * * * * 3183 0 0 Q 43 3924 * * * * * * * 3881 3363 * * * 379 * * * * * * 43 0 * * * * * * 3183 0 0 K 44 3988 * * * * * * * 1398 4435 * * 2541 3074 * 4169 3363 * * 3881 44 0 * * * * * * 3183 0 0 W 45 * 3363 * * * * * * * 2541 * * * * * * * * 668 3301 45 0 * * * * * * 3183 0 0 L 46 * * * * * * * * * 0 * * * * * * * * * * 46 0 * * * * * * 3183 0 0 Q 47 * * * * * * 3924 * 3363 * * * * 827 2541 * * 3301 * * 47 0 * * * * * * 3183 0 0 L 48 * * * * * * * 3924 * 1184 3301 * * * 2541 * 3363 3881 * 4169 48 0 * * * * * * 3183 0 0 T 49 * * * * * * * * * * * * * * * * 0 * * * 49 0 * * * * * * 3183 0 0 H 50 * 2541 * * 3988 * 1625 * * * * * * * * * * * * 1182 50 0 * * * * * * 3183 0 0 E 51 * * * 443 * * * * 3301 * * * * 3363 * * 3924 * * * 51 0 * * * * * * 3183 0 0 V 52 * * * * * * * 4315 2579 1634 * 3491 * * * * * 1430 * * 52 0 * * * * * * 3183 0 0 E 53 * * * 0 * * * * * * * * * * * * * * * * 53 0 * * * * * * 3183 0 0 V 54 * * * * * * * 3881 * 4242 2426 3988 * * * 3041 3301 1296 * * 54 0 * * * * * * 3183 0 0 Q 55 3491 * * * * * * * 1191 * * * * 1625 3924 3593 * * * * 55 0 * * * * * * 3183 0 0 Y 56 * * * * 3491 * 2118 * * 3363 * 3205 * * 3881 * * * * 1296 56 0 * * * * * * 3183 0 0 Y 57 * * * * 2579 * 2212 3593 * 3491 * * * * * * * * * 1168 57 0 * * * * * * 3183 0 0 N 58 * 3881 * 2426 * 3593 * 3988 * 3301 * 1625 * 3041 * 4242 * * * * 58 0 * * * * * * 3183 0 0 I 59 * * * 3881 * * * 1847 2791 * 3924 4242 * 2439 3988 * * 2802 * * 59 0 * * * * * * 3183 0 0 K 60 * * * * * * * * 461 * * * * 2541 3301 * * * * * 60 0 * * * * * * 3183 0 0 K 61 * * * * * * * * 1385 * * * * * 696 * * * * * 61 0 * * * * * * 3183 0 0 Q 62 * * * * * * 3363 3075 * 4242 2730 * * 958 * * 3924 * * * 62 0 * * * * * * 3183 0 0 N 63 4242 * 3491 3593 * * * * 3881 * 3301 2404 * 2955 * 2389 3363 * * * 63 0 * * * * * * 3183 0 0 A 64 272 2541 * * * * * * * * * * * * * * * * * * 64 0 * * * * * * 3183 0 0 E 65 * * * 827 3491 * 3363 3593 * 2579 * * * * * * * * * * 65 0 * * * * * * 3183 0 0 K 66 3593 * * * 4688 * * * 775 * 4543 3301 * 4435 4315 * 4242 * * * 66 0 * * * * * * 3183 0 0 Q 67 * * * 2541 * * * * 2599 * * * * 593 * * * * * * 67 0 * * * * * * 3183 0 0 L 68 * * * * 4242 * * * * 969 1560 * * * * * * 3363 * * 68 0 * * * * * * 3183 0 0 L 69 3384 * 3881 3363 * * * 4435 2393 2349 3988 * * 4169 3593 * 3924 * * 4688 69 0 * * * * * * 3183 0 0 V 70 * * * 1351 3881 * * 4543 * * * * * 2762 * 3075 4435 2435 * * 70 0 * * * * * * 3183 0 0 A 71 0 * * * * * * * * * * * * * * * * * * * 71 0 * * * * * * 3183 0 0 K 72 * * * * * * * 2541 758 * * * * * 2078 * * * * * 72 0 * * * * * * 3183 0 0 E 73 3363 * 2689 557 * * * * * * * * * 3881 * * * * * * 73 0 * * * * * * 3183 0 0 G 74 1806 * * 2966 * 2349 3593 * * * 3491 * * 3363 * 3050 * * * * 74 0 * * * * * * 3183 0 0 A 75 1625 1298 * * 3363 * * 3593 * * * * * * * * * 3491 * * 75 0 * * * * * * 3183 0 0 E 76 3301 * 2073 1012 * * * * 3881 * * * * 3363 * * * * * * 76 0 * * * * * * 3183 0 0 K 77 * * * * * * * * 460 * * * * * 1873 * * * * * 77 0 * * * * * * 3183 0 0 I 78 * * * * 3881 * * 1175 * 1784 3363 * * * * * * 3301 * * 78 0 * * * * * * 3183 0 0 K 79 * * * * * * * * 1046 * 3881 * * 3491 1959 3301 * * * * 79 0 * * * * * * 3183 0 0 K 80 * * * * * * * * 101 * * * * * 3881 * * * * * 80 0 * * * * * * 3183 0 0 K 81 * * * * * * * * 154 * * * * * * 3301 * * * * 81 0 * * * * * * 3183 0 0 R 82 * * * * * * * * 4185 * * * * 2385 408 * * * * * 82 0 * * 0 * * * 2986 0 0 //