HHsearch 1.5 NAME c2ma7A_ FAM FILE c2ma7A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2ma7A_.a3m DATE Sat Sep 7 08:32:17 2013 LENG 73 match states, 73 columns in multiple alignment FILT 112 out of 16063 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.3 EVD 0.5072 0.9672 SEQ >ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHSCSSCEEETTTTEEESCHHHHHHHTTTTSSCSCCC >sa_dssp EEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEDEEDEEEBEEEDBEAEEDEDDCDEEDDBEECEEDDEEEDEEE >ss_pred CCCCCCCHHHCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCC >ss_conf 9522120330449757757478851120211212223221222356443035514267553276646898899 >Consensus xxlxxHxxxHxxxkxxxCxxCxxxfxxxxxxxxHxxxhxxxkxxxCxxCxkxFxxxxxlxxHxrxHtgekpyx >c2ma7A_ MGHHHHHHSHMPNGKLKCDVCGMVCIGPNVLMVHKRSHTGERPFHCNQCGASFTQKGNLLRHIKLHSGEKPFK >UniRef50_UPI0000ECC662(26-91:575) CDNA FLJ25343 fis, clone TST01040. n=1 Tax=Gallus gallus RepID=UPI0000ECC662 E=8e-07 s/c=0.83 id=21% cov=90% LQYKKHVSQH-EEIKFICSYCNYISYTKGEFQRHLVKHTGTFPYQCEYCDYGAVRHDYIVKHtRRVH------- >UniRef50_Q28ZV0(484-545:704) GA11925 n=4 Tax=Drosophila RepID=Q28ZV0_DROPS E=1e-05 s/c=0.82 id=24% cov=85% ----HLQQLHSVDTLHACEICHKTFKSADFLAVHRKRHS-ERHYQCDKCSLNYINAAELRVHyERAH------- >UniRef50_A9TF68(132-189:395) Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TF68_PHYPA E=7e-05 s/c=0.84 id=24% cov=81% ---KHYRRKHCTEKQWKCDKCSKGYAVQSDYKAHLKT-CGTRGHCCD-CGRVFSRVESFIEHQ---------- >UniRef50_Q6P2D0(147-213:407) Zinc finger protein 1 homolog n=23 Tax=Eutheria RepID=ZFP1_HUMAN E=5e-05 s/c=0.73 id=24% cov=93% ------EKTHSGVEYSEYNKSGKALSHKAAIFKHQKIKNLVQPFICTYCDKAFSFKSLLISHKRIHTGEKPYE >UniRef50_Q08AG5(117-198:666) Zinc finger protein 844 n=5 Tax=Homo sapiens RepID=ZN844_HUMAN E=0.0009 s/c=0.55 id=22% cov=99% --LNRHIRADTAHKpseyqeygqePYKCQQRKKAFRCHPSFQMQEKAHTGEKLYDCKECGKTFISHSSIQRHMIMHNGDGTYK >UniRef50_Q0IGS1(166-237:387) RT01123p (Fragment) n=5 Tax=melanogaster subgroup RepID=Q0IGS1_DROME E=8e-09 s/c=0.85 id=23% cov=100% -GLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFK >UniRef50_P10925(655-726:782) Zinc finger Y-chromosomal protein 1 n=74 Tax=Euteleostomi RepID=ZFY1_MOUSE E=0.001 s/c=0.62 id=22% cov=99% --LKKHVATHKSKKMHQCRHCDFNSPNPFLLSHHILSAHTKNVPFKCKRCKKeFQQQCELQTHMKTHSSRKVYQ >UniRef50_P08153(570-639:709) Transcriptional factor SWI5 n=7 Tax=Saccharomyces cerevisiae RepID=SWI5_YEAST E=5e-05 s/c=0.70 id=19% cov=95% -----HIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKAYACPCGKKFNREDALVVHrsRMICSGGKKYE >UniRef50_B0W205(140-210:600) Zinc finger protein 509 n=1 Tax=Culex quinquefasciatus RepID=B0W205_CULQU E=0.001 s/c=0.63 id=24% cov=97% --LTKHAKIlHSKQKLFKCERCSKS-FYRNNALKFHMLSHQSKNFQCRSCEKEFVDARNLERHLKTHVTQKEYR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2446 * 1138 3965 * * * * * * 1746 * * 1 0 * * * * * * 5288 0 0 G 2 2522 * * 4161 * 975 * * * * * * * 3556 4689 3444 4454 * * * 2 0 * * * * * * 5880 0 0 H 3 * * * * * * 2904 5760 5693 627 * 5459 * * 4922 * * 5920 * 3198 3 0 * * * * * * 7477 0 0 H 4 6521 * * 6353 * 6377 2698 * 1944 6255 5238 2856 * 2625 3026 4117 5922 6153 * * 4 0 * * * * * * 7756 0 0 H 5 4372 * 6271 3900 * * 1840 * 2859 6182 6518 3584 * 3466 2369 4617 * * * 5528 5 0 * * * * * * 8060 0 0 H 6 6913 * * 5103 * * 461 3683 5295 6376 6574 6884 * 6411 4197 * * 5922 * 5710 6 24 5915 * 1017 983 * * 8377 1610 0 H 7 5107 6467 * 3527 * * 5926 4358 2593 3239 3225 4906 * 2316 3475 5218 7020 3829 * * 7 30 6399 6883 0 * * * 8454 1000 0 H 8 6912 * 5286 4586 7034 6509 4097 5183 2291 4027 5203 3945 * 3229 2144 3859 5878 5983 * 5191 8 14 6672 * 0 * * 0 8449 1000 1000 S 9 3828 5991 6460 6822 5845 5719 6534 2317 4267 5166 4761 4215 7209 4641 3915 4329 2582 3292 6695 4888 9 26 5780 * 0 * 0 * 8445 1646 1000 H 10 5919 6456 * 4654 6793 * 228 6664 5168 * 6995 * 6077 * * * * 6777 * * 10 72 6706 4668 0 * * * 8454 1000 0 M 11 4635 * 6424 3627 5101 5122 4523 5195 4436 4123 3854 3756 6544 5054 4038 3032 2348 4031 * 6627 11 104 4392 5526 766 1279 576 1604 8366 3117 2403 P 12 4358 6349 3512 3439 5668 1565 7127 6735 3595 4796 * 4665 3504 5143 4658 4050 6607 * * * 12 10 7210 * 1585 585 1548 604 8401 1000 2201 N 13 4457 * 3010 1753 6866 4028 6939 4714 4038 6878 5607 4029 4119 6747 3993 4960 4790 3869 * * 13 27 6677 6821 1000 1000 0 * 8449 1000 1692 G 14 5172 * * 4424 * 4493 6388 6895 1117 * 5630 4882 4678 5067 2195 4847 5889 7165 * * 14 48 4926 * 1580 588 * 0 8490 2745 1000 K 15 4883 * 5456 6226 5593 6878 * 5783 3756 3380 5941 6731 1484 3825 3383 3804 4482 4916 * 6208 15 56 4721 * 3014 191 0 * 8490 2876 1000 L 16 * 5771 * * 1714 * 2622 4860 6122 4486 * * * 6719 * 6193 * 7047 5617 1435 16 20 6162 * 1000 1000 * * 8645 1000 0 K 17 4153 6831 4869 3788 * * 6721 5515 1937 6952 5718 6513 4999 3083 3882 3667 3236 3511 * 6942 17 26 6719 6912 2322 322 * * 8645 1000 0 C 18 * 96 5722 * * 6159 * * * * * 5944 * * * * * * * 6037 18 0 * * * * 0 * 8651 0 1000 D 19 5080 * 2924 3188 5748 4629 4356 4330 3684 6831 6956 4470 2756 3453 4932 3620 4064 5763 * * 19 14 6719 * 1000 1000 * * 8645 1000 0 V 20 5949 * 5401 3149 3436 6513 3202 3178 5166 4816 6690 6817 * 3390 4417 6595 3985 3381 6580 3048 20 51 4839 * 834 1188 * * 8645 2585 0 C 21 6001 143 * * * * * * * 5949 * * 5548 * * 5508 * * * 5724 21 56 5187 6577 2000 415 * * 8645 2229 0 G 22 5637 * 3214 4168 * 1679 5742 * 3530 6947 6718 3581 3906 4256 7270 2926 5088 6460 * * 22 17 6403 * 0 * * 0 8619 1000 1000 M 23 4363 5105 7189 3856 4179 * 5393 7091 1446 4369 5204 4519 * 5205 3984 5886 4730 5308 6475 3434 23 66 4747 7017 3048 186 0 * 8619 2379 1000 V 24 3639 * 5070 5081 5561 4033 * 5337 3241 4845 6109 5780 6186 4128 2648 2654 3156 4203 7037 5905 24 14 * 6745 * * * 0 8643 0 1000 C 25 4220 5288 * * 929 * 5992 5702 6266 4222 * * * * 6634 3813 3734 6371 * 2993 25 17 6388 * 2000 415 0 * 8640 1000 1660 I 26 4310 5293 5943 * 4167 5174 5270 3039 3345 4215 7151 5082 4696 5469 3141 2624 3656 4383 * 5370 26 0 * * * * * * 8645 0 0 G 27 5379 4553 4187 6797 3847 5902 3663 6563 3876 5872 7252 3915 6162 4178 3606 2582 2824 * 4861 4587 27 0 * * * * * * 8645 0 0 P 28 3495 6633 5328 3922 5665 4986 * 5473 2622 5123 4560 6893 3823 3801 3109 2960 6463 5003 6682 4170 28 0 * * * * * * 8645 0 0 N 29 3326 6068 4727 5286 * 4434 4603 * 4543 3722 * 3534 4756 4405 3570 2662 3690 3901 6580 4369 29 27 5751 * 1000 1000 * * 8645 1612 0 V 30 3695 6725 3104 3998 6483 5435 3072 * 4040 5159 6792 2767 6433 4771 4009 2769 4315 5705 * 6633 30 41 5140 * 777 1263 * * 8645 2291 0 L 31 4761 * * 7068 3070 6598 4343 4103 5285 1381 4758 6433 6912 * 3709 4839 * 4224 5300 4009 31 14 * 6682 * * * * 8645 0 0 M 32 4592 5473 3479 3996 4961 5936 4403 6414 2300 3765 5775 4777 * 3792 2932 5354 3695 5044 * 6695 32 0 * * * * * 0 8627 0 1000 V 33 4368 6759 5038 4046 * 5758 3661 3517 3011 4222 5705 4623 * 3905 2342 3789 4146 5349 * 6415 33 0 * * * * 0 * 8627 0 1000 H 34 * * 5949 * 6757 * 451 5369 * * * * * 4430 3225 5208 * 4711 * * 34 45 5026 * 289 2462 * * 8645 2663 0 K 35 4681 5165 6682 3395 4687 * 3320 3460 3632 3714 2781 6682 * 3085 4062 5293 6874 4240 * 5525 35 90 4249 6956 1019 981 * * 8645 3465 0 R 36 4528 6435 5145 6158 5990 6559 3488 5246 2580 3511 5763 3881 6696 3680 2231 4261 5769 5281 6083 6945 36 17 6424 * 0 * 0 * 8642 1587 1000 S 37 5219 6953 4590 6034 5736 5203 * 3411 3822 4431 3864 4037 * 5103 4197 3566 2376 2782 * 6001 37 54 4763 * 0 * * * 8645 2840 0 H 38 6122 6001 6637 4515 6797 6674 756 6592 4557 * 7101 6956 * 5644 4865 3395 6830 5665 * 4078 38 12 * 6958 * * * * 8645 0 0 T 39 3725 6670 5193 3926 6508 5486 2829 4662 5235 4325 4374 3718 6429 5645 4237 2875 2759 4697 * * 39 34 6169 6753 1626 565 0 * 8636 1660 1000 G 40 4792 * 3514 4042 6679 2085 3974 6989 4990 4438 5485 3269 4991 4155 4140 3402 4919 5434 * * 40 48 4948 * 2398 303 * 0 8629 2605 1000 E 41 4937 6594 3355 2282 * 3845 5198 4299 4028 4419 5249 5209 4463 4522 4852 4507 4490 3162 * 5571 41 40 5188 * 1476 643 0 * 8629 2125 1000 R 42 5687 * 5014 4766 5235 4708 6674 6421 1489 5299 5346 4673 5817 3528 2304 5248 6831 5036 * 6844 42 12 6956 * 1000 1000 * * 8645 1000 0 P 43 4516 4851 6884 4907 4591 5196 6896 6169 3729 3757 5155 3952 2008 4549 4088 3436 4972 4574 6862 5528 43 36 5326 * 2718 238 * * 8645 2197 0 F 44 4927 4182 6849 * 1721 * 2851 5318 5149 5187 6912 4950 4272 5629 * * * 5415 * 2030 44 0 * * * * * * 8645 0 0 H 45 4990 5659 4733 3752 6056 5590 4701 4375 3131 4955 5167 4814 3850 2685 4700 3602 4363 3765 * 4758 45 14 6668 * 1000 1000 * * 8645 1000 0 C 46 5615 329 5016 * 6162 * 5655 * * * * * * * 5729 4036 6421 * * 5207 46 0 * * * * * * 8645 0 0 N 47 5389 3916 3114 2796 * 4574 4540 5646 3720 * 5714 5195 3203 4053 4580 3640 2918 * * * 47 0 * * * * * * 8645 0 0 Q 48 * 5671 4916 3221 4475 5574 3434 3701 4377 3081 6433 6577 5459 3485 5314 5975 4537 3048 * 3333 48 47 4968 * 549 1660 * * 8645 2764 0 C 49 * 249 * 6636 * 4334 * * * * * 4771 5030 * 6122 * * 7071 * 6702 49 0 * * * * * * 8645 0 0 G 50 5495 6607 2938 3524 6951 1650 4341 5812 4359 5312 * 4267 3972 6020 5037 3597 5802 6592 * 6674 50 36 5356 * 2582 264 * * 8645 1637 0 A 51 3744 5055 4800 4880 4252 * 6595 * 1430 6633 4458 4716 * 6893 2772 6899 5716 5941 * 3333 51 0 * * * * * * 8645 0 0 S 52 3211 5492 * 5121 * 3361 6595 4386 3522 5797 6951 6893 6789 4357 3129 2567 2663 4522 6421 6633 52 15 6597 * 0 * * * 8645 1000 0 F 53 4670 5378 * * 581 5967 * 6086 6560 4701 * * * * * 5396 4108 * * 3230 53 14 6657 * 1000 1000 * * 8647 1000 0 T 54 3832 5476 5665 * 5906 5787 5424 4498 3006 6986 5434 3614 4220 6478 3702 2434 3434 3399 * 4880 54 11 7049 * 2000 415 * * 8647 1000 0 Q 55 5310 5147 4361 4650 5501 * 4431 * 5408 4321 * 4282 5906 2848 2443 2735 3183 5984 5889 4962 55 0 * * * * * * 8647 0 0 K 56 3367 * * 4415 5785 5312 4772 4538 1881 3966 * 5071 4330 5792 3127 2847 5155 6716 * 6751 56 33 6560 6419 1000 1000 * * 8647 1000 0 G 57 3568 4899 2979 5203 5068 4005 5281 6585 5323 5850 6856 5097 * 4848 4098 1725 4122 6718 5274 4995 57 0 * * * * 0 * 8627 0 1000 N 58 4244 6198 3525 3713 * 4369 3518 5989 4900 3892 * 2601 6950 3790 4949 2815 4043 * * 4725 58 15 6562 * 1000 1000 * * 8647 1000 0 L 59 * 6847 * * 3191 * 6884 5943 5330 731 3897 * * 6589 5246 * * 4264 5379 4324 59 0 * * * * * * 8454 0 0 L 60 4964 * 4433 4100 * 5692 4649 4107 2564 4211 4672 3919 5827 3331 3425 4746 3359 4369 * 5358 60 0 * * * * * * 8444 0 0 R 61 4130 * 5057 3458 * 6437 6439 4563 2303 4889 5910 4841 * 3623 2173 5079 4884 3898 * 4833 61 0 * * * * * * 8442 0 0 H 62 * 5820 * * * * 55 * * 5669 * * * * * * * * * * 62 80 4219 * 318 2336 * * 8442 3225 0 I 63 * 6860 6377 3314 * * 6794 2909 3152 2840 2887 * * 3030 3273 6550 5546 3783 * 5741 63 25 5866 * 0 * * * 8442 1729 0 K 64 4757 * * 5131 5925 * 6675 4938 2194 3882 4766 4289 * * 1270 5433 5777 4787 6809 * 64 53 4805 * 0 * * * 8546 2672 0 L 65 6360 * * 6391 5429 6300 * 3022 2929 4302 4256 5682 * 5552 4175 3776 2127 2748 5475 6257 65 0 * * * * * * 8258 0 0 H 66 * 4409 * * * * 124 * * * * * * * * 5896 * 5735 * * 66 0 * * * * * * 7996 0 0 S 67 4524 * 5099 * * 6059 4165 4718 5767 * * 2939 6153 * 4029 2405 1361 5919 * * 67 18 * 6305 * * * * 7645 0 0 G 68 * * 4358 3842 * 985 * * 3116 6128 5845 4465 4892 4973 3888 5977 5888 5771 * * 68 0 * * * * 0 * 7595 0 1000 E 69 6132 5716 3330 904 * 4653 * * 4077 4555 * 6097 5748 4868 * 4934 5558 3839 * * 69 23 5999 * 0 * * * 7378 1000 0 K 70 5299 * * * * * * * 1139 * * * * 4421 1295 * 5725 * * 4394 70 25 5850 * 0 * * * 7215 1000 0 P 71 4700 * 4566 5507 * * * * 4336 4525 * 4536 520 5635 5567 * 5474 * * * 71 0 * * * * * * 7161 0 0 F 72 * * * * 1617 * 3728 * * * * * * * * * * * * 741 72 0 * * * * * * 6952 0 0 K 73 * * * 1609 * * * * 1527 * * * * 4545 1824 * * * * * 73 0 * * 0 * * * 6137 0 0 //