HHsearch 1.5 NAME c2m5jA_ FAM FILE c2m5jA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2m5jA_.a3m DATE Sat Mar 8 08:14:02 2014 LENG 107 match states, 107 columns in multiple alignment FILT 107 out of 501 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.4 EVD 0.4748 1.9583 SEQ >ss_dssp CCTTTSCCEEEEECCCBHHHHHHHHHHHHTCEEECSSSSCSCCBCCCEEEEECHHHHHHHHHTSSSCEEECCTTSEEEEECCCCCCTTTTCSSTHHHHTC SSSCBCC >sa_dssp EEDEECEEDEBEBEDCDBDCAAEDBADEDEBEBCDEECEEEECEBDEAECDBBDBCAADEABCEECCBAECCEECDACBCEDCECDCEEECEEDDDBCEE CEBBBAE >ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCEEECCEEEE ECCCCCC >ss_conf 9443467077871888999999999997296999847885598243346666999999998548980899956987999854755677664021138999 3047899 >Consensus axAxxaqxxxxxixxxxLxxaLxxlxxqsgxxixyxxxxxxxxxxxxxxgxxtxxxaLxxlLxgtxlxxxxxxxxxixixxxxxxxxxxxxxxlxxixVx gxxxxxa >c2m5jA_ SMAQAAQQKNFNIAAQPLQSAMLRFAEQAGMQVFFDEVKLDGMQAAALNGSMSVEQGLRRLIGGNPVAFRLQPQGQIVLSRLPTANGDGGALALDSLTVL GAGGNNA >UniRef50_Q4ZPM8(31-129:811) TonB-dependent siderophore receptor n=5 Tax=Pseudomonas syringae group RepID=Q4ZPM8_PSEU2 E=3e-17 s/c=0.90 id=20% cov=91% --AQQASVVAYDLPAGPMATTLNQISSQGGLALSLDPALVAGKTSSAVKGNFDAATALREALRGSGLQLVQSSAGTYTLMVMEQ-----NALNLSDVNIN ANS---- >UniRef50_A7V665(30-131:1154) Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=A7V665_BACUN E=4e-05 s/c=0.49 id=19% cov=93% -LASHAQNAGINIKltDKPLSAFIQSIEQQTDFKFFYEQQQVDVKQHVTVNvRNASINAALEQALRNTNIAYSISEKRILLTQKQDNAPSQSGKVILAKG QVT------- >UniRef50_A6EKX9(38-149:211) Putative outer membrane protein (Fragment) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKX9_9SPHI E=4e-07 s/c=0.50 id=19% cov=101% SAAGYAQKITLNERNTPLMKVFDKISTQSGLDFLVPASVLKeSKPVNINVSQMELEKVLEQLFVGTELNFKIAQKSVVISRRERSLLDGLKKITLSAfqn kIDVRGRIVDSA >UniRef50_C6VTP2(31-126:1092) TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTP2_DYAFD E=5e-06 s/c=0.54 id=17% cov=70% ---------SFEIRRATLKTALKKLEKTTGYTIAYPSEKVGKVRSVTVpPGKRTIEQTMLLMLERTDLQFRQAGRNIILFEKLE---------------- -------- >UniRef50_D1PTP6(23-131:1126) Putative uncharacterized protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTP6_9BACT E=5e-05 s/c=0.45 id=15% cov=95% -----GQTVTVNLKKASLQQVFKAIEKQTSYRFSYRNEVIDHRANINIHHTNAPvSRVLDDAFKGRNLTYSIVSPKSIVVTdRNEKTQVKQRGTTTGKIT gvVKDASGEP- >UniRef50_A6EID8(39-152:1098) Putative uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EID8_9SPHI E=0.0001 s/c=0.42 id=10% cov=36% -------------------------------------------------------EVLKKMLLNTGYTFEPMANNLIIIKPVGAQQTVSGVIT------- ------- >UniRef50_A8UGT8(30-114:771) Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UGT8_9FLAO E=0.0002 s/c=0.55 id=15% cov=80% ---------------QSLAQILVQLEKHYNVKFSFETKTVKDILITSLDPKLSLEQALNKLRDVTNLNFEILSKRFIAITPKKDVELNKTIQRLEEVIVT ------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 836 * * * * * * * * * * * * * * 1185 * * * * 1 0 * * * * * * 5940 0 0 M 2 2740 * * 4796 3946 * * 4673 * 2081 3749 3800 4629 4632 3211 * * 3317 * 4692 2 0 * * * * * * 6057 0 0 A 3 426 * * 5177 * 5343 * * * * * * 5164 * * 2750 5232 * * * 3 0 * * * * * * 6564 0 0 Q 4 2439 * * 3839 * 4057 * * 5332 4375 5538 * 4455 1453 5217 3663 4372 * * 5267 4 0 * * * * * * 6593 0 0 A 5 1795 * 4549 5279 4365 5289 5197 * 5561 5780 * 4033 5680 2850 * 2439 4706 4947 * 5152 5 0 * * * * * * 6833 0 0 A 6 732 * 4628 * * 2696 * * * 5832 * 4834 5833 6067 * 3843 4866 6165 * * 6 58 4659 * 2055 397 * * 7252 2273 0 Q 7 2964 * * 3210 * 4771 * 6138 3727 5859 * * 5902 1123 5158 4470 4696 5904 * 5961 7 0 * * * * * * 7249 0 0 Q 8 4155 * 6469 3374 * 4585 * 6093 2868 * * 3567 3094 3254 3101 5219 3068 4148 * 5843 8 31 5543 * 1816 482 * * 7297 1628 0 K 9 5791 * 6062 * * * 3621 2443 4152 4586 6188 * 5120 4114 2551 * 5308 2134 6368 3881 9 66 5105 5984 0 * * * 7305 1770 0 N 10 3338 * 5042 3890 * 5834 4910 6257 5240 6064 * 3703 4749 4087 5164 2197 2053 6383 * 5252 10 0 * * * * 0 * 7229 0 1000 F 11 * * * * 1315 * * 2595 * 2516 5312 * * * * * * 3692 * 2688 11 0 * * * * * * 7277 0 0 N 12 5423 * 1571 4768 * * 4797 * 5762 * * 1907 * 4727 5256 2468 4734 * * * 12 0 * * * * * * 7277 0 0 I 13 5767 6362 * 4298 6265 5798 * 1213 5796 2064 4609 * * 5407 * * * 2895 * * 13 38 5266 * 1000 1000 * * 7266 1746 0 A 14 2875 * 4960 4872 * 6069 * * 2181 * * 5373 1487 4005 3516 6217 5796 * * * 14 23 5985 * 1000 1000 * * 7266 1000 0 A 15 1505 * 5133 5826 * 3604 * * 4469 * * 2609 3693 4649 6082 2753 5058 * * * 15 0 * * * * * * 7294 0 0 Q 16 3055 * 5198 4716 * 2180 * 4509 4446 * 5905 * * 1437 * 3959 6205 4648 * * 16 20 6179 * 1000 1000 * * 7255 1000 0 P 17 5320 * 4244 * * 6925 * * 3649 5956 * * 1340 * 4758 1663 3828 * * * 17 0 * * * * * * 7449 0 0 L 18 4246 * * * 6462 * * 5686 * 297 5449 * * * 5466 * 6468 5007 * 6092 18 0 * * * * * * 7467 0 0 Q 19 3095 * 3366 2555 * 3629 6523 5776 2712 * 6572 6631 4487 4134 4498 2871 5341 5294 * * 19 15 6567 * 1000 1000 * * 7480 1000 0 S 20 2471 * 3298 2819 * 5757 * * 3773 * * 4155 5537 2561 5250 3284 3487 5686 * * 20 0 * * * * * * 7506 0 0 A 21 1016 * * * 5163 4756 * 4291 * 6223 * * * 6123 * 4859 3676 2006 * * 21 0 * * * * * * 7506 0 0 M 22 * * * * 2786 * * 3060 * 617 4784 * * * * 6490 * 4809 * * 22 0 * * * * * * 7504 0 0 L 23 3646 * 5223 3877 * * 5714 5587 2258 3876 5268 4350 5611 3146 3520 3726 3450 5343 6419 6764 23 0 * * * * * * 7561 0 0 R 24 2602 * 4813 2968 * 6840 5489 5307 3933 5828 * * * 2001 3426 3109 4762 5307 * 6419 24 0 * * * * * * 7561 0 0 F 25 6183 * * * 2711 * * 1615 * 1452 5620 * * * * * 6511 3903 * 4526 25 0 * * * * * * 7561 0 0 A 26 1504 6356 * 2236 * 3198 * 6679 6101 * * * * 4714 4287 2556 5725 6469 * * 26 0 * * * * * * 7561 0 0 E 27 3305 * * 4774 * * 4349 5560 2053 4629 * 4267 * 2979 2438 4560 4516 4030 * * 27 0 * * * * * * 7561 0 0 Q 28 4535 * * 4972 * * 6404 4090 3927 5213 * 6778 * 825 3935 6612 4274 4037 * * 28 0 * * * * * * 7561 0 0 A 29 1948 * * * 5100 4908 * * * * * 6640 * * 5537 1767 1826 5111 * 4574 29 0 * * * * * * 7561 0 0 G 30 6612 * 3300 5038 * 893 6706 * 3407 * * 3159 * 5299 4404 5027 * * * * 30 12 6966 * 0 * * * 7561 1000 0 M 31 5459 4064 * * 3956 6476 * 2821 * 2664 5079 * * 4801 5001 * 4563 2290 5357 2518 31 0 * * * * * * 7561 0 0 Q 32 4365 * 4124 3994 4911 6323 * 6446 3789 5158 5744 4403 4016 2672 3099 2750 3825 4886 * 5686 32 0 * * * * * * 7561 0 0 V 33 * * * * 1727 * * 1896 * 2265 * * * * * * * 2352 * 5304 33 0 * * * * * * 7561 0 0 F 34 2997 * 6507 * 3320 4551 * 3211 * 2198 4173 5724 * 6578 * 2867 4968 3423 * 4382 34 0 * * * * * * 7561 0 0 F 35 4354 * * * 1758 4871 * 4587 * 5495 5909 * * * * 6116 6302 3577 * 1218 35 15 6612 * 0 * * * 7561 1000 0 D 36 4730 * 1940 3053 * 6429 * * 6372 6495 * 3395 3015 4034 3925 3035 4600 4737 * * 36 0 * * * * * * 7561 0 0 E 37 3458 * 3312 3276 5539 3607 6677 * 7026 5127 * 3839 3183 4308 4762 2765 3209 6188 6500 6964 37 0 * * * * * * 7561 0 0 V 38 2502 * 3798 2165 * 4041 5958 6157 2992 * * 4386 4542 3444 5239 4057 4916 6688 * * 38 13 * 6816 * * * * 7561 0 0 K 39 3043 6576 3283 4244 * * * 3955 5277 1705 6706 6685 6362 3740 5129 5926 3624 3586 * * 39 0 * * * * 0 * 7557 0 1000 L 40 3559 * 4571 * 4934 5337 * 3014 * 2276 4672 * 4892 6192 * 6188 3473 1761 * * 40 53 5929 5662 0 * * * 7561 1647 0 D 41 2322 5223 3364 4258 * 4301 * 5767 2909 * 6470 3830 5660 4018 3251 3190 6074 5851 6422 * 41 96 4419 5811 639 1482 940 1062 7536 3009 1791 G 42 3806 * 3113 5102 * 1532 4891 * 3434 * 5457 2778 4841 5491 7185 4157 6347 6505 * * 42 25 5884 * 0 * 1661 549 7559 1720 2269 M 43 3768 * * 4640 5943 6702 5662 3499 2421 3456 5079 * 6250 5045 2519 6482 4123 3643 * 3671 43 20 6178 * 0 * 0 * 7559 1610 1802 Q 44 4128 * * * * * 5495 6708 2453 5509 * 4485 4415 2773 1976 5459 2684 5494 * 6154 44 14 6676 * 2000 415 * * 7559 1000 0 A 45 2534 * 6411 6708 * 5647 6539 3988 6742 6381 * 4427 4375 * * 2291 3011 1900 * * 45 16 6506 * 0 * * * 7559 1000 0 A 46 4041 * 6034 5187 * 5054 4601 4447 4430 5245 * 2427 2825 5459 3661 3729 3163 3464 * * 46 18 6337 * 1000 1000 * * 7559 1000 0 A 47 1830 6758 5222 5385 * 3443 * 3712 5014 4237 5853 5379 3108 5683 6810 3733 3434 5026 * 5473 47 32 5508 * 0 * * * 7559 1638 0 L 48 6758 * 4828 * 4064 * * 3285 5001 2011 * 4524 * 5153 4355 4440 6258 1581 * * 48 14 6664 * 0 * * * 7559 1000 0 N 49 4541 * 5018 4525 6675 * 4331 4883 3214 3931 * 3489 4911 3244 2926 3722 5083 3171 * 4632 49 220 2924 6676 297 2427 * * 7559 4747 0 G 50 3941 * 6686 4599 * 1037 5860 5484 3295 * * 3796 6390 4319 4339 4264 6734 * * 6621 50 27 5763 * 0 * 0 * 7559 1804 1000 S 51 4635 * 2912 3886 * 4660 6063 * 3835 6697 * 2577 6618 3628 2838 3131 3481 5448 * * 51 0 * * * * * * 7560 0 0 M 52 3508 * 6525 4369 2534 4580 6646 4471 4286 3521 2872 4970 * 5009 6667 5158 5563 3739 * 3164 52 20 6178 * 1024 977 * * 7560 1688 0 S 53 5144 * 4189 4097 * 6523 * 6159 5532 6692 * 5609 3268 6236 7317 1725 1490 * * * 53 13 6857 * 0 * * * 7559 1000 0 V 54 3297 * 6323 * 5133 * * 3343 * 1734 6968 * 2689 * * * 5051 2043 5485 * 54 27 5760 * 0 * * * 7559 1695 0 E 55 5178 * 2556 2307 6630 5726 * 5386 3754 3973 * 4968 * 2985 3508 3180 5280 5195 * * 55 0 * * * * * * 7559 0 0 Q 56 3075 * 4017 1532 * 4857 * * 4209 * 6834 5078 6004 2256 5783 4619 4945 5037 * * 56 0 * * * * * * 7625 0 0 G 57 714 * * * 6172 4082 * 4139 * 5705 * * * 6355 * 6661 4361 2551 * * 57 0 * * * * * * 7625 0 0 L 58 * * * * 5153 * * 4236 * 312 4176 * * * * * * 4418 * 6457 58 0 * * * * * * 7625 0 0 R 59 4073 * 2579 3138 * 4754 5660 * 3601 4461 6788 3544 * 3873 2600 4605 3800 6505 6353 6534 59 0 * * * * * * 7625 0 0 R 60 3307 6767 4640 3703 * * 5420 4703 2946 3166 6360 6877 * 2286 2948 4534 4514 6691 * 5790 60 0 * * * * * * 7625 0 0 L 61 2923 5123 * * 6734 * * 2979 * 907 3985 * * * * * * 3226 * * 61 0 * * * * * * 7625 0 0 I 62 6405 * * * 3181 * * 4647 * 374 * * * * 5539 * 4993 6234 * * 62 0 * * * * * * 7625 0 0 G 63 2269 * 4038 3039 * 4215 * 6635 2506 6839 * 4324 * 3178 4267 3804 4866 4538 * * 63 0 * * * * * * 7625 0 0 G 64 * * 3593 4059 * 954 6688 * 5491 * * 3258 4349 4463 5517 4089 6872 5580 * * 64 0 * * * * * * 7625 0 0 N 65 4437 * * 6405 * 5758 5905 * 4786 4105 * 5676 * 3252 4747 2898 1057 6165 * 5497 65 0 * * * * * * 7625 0 0 P 66 5551 * 3487 5731 * 1488 6165 * 5072 * * 2585 2497 6348 4345 3941 * * * * 66 0 * * * * * * 7625 0 0 V 67 5734 4425 * * 3523 6380 * 3407 * 727 * * * * * * * 3611 6516 4487 67 0 * * * * * * 7625 0 0 A 68 3786 6657 4140 3364 * 4646 5581 6914 4383 * 6366 4433 * 3858 2930 2918 2490 3683 * * 68 0 * * * * * * 7636 0 0 F 69 2993 * * * 2301 6353 * 5021 * 3901 * * * * * * * 2852 5150 1341 69 10 * 7142 * * * * 7636 0 0 R 70 6554 * 5791 2307 6456 * 5812 6912 3422 5346 4940 5268 * 3900 2877 3113 3443 3047 6464 6334 70 15 * 6605 * * 0 * 7637 0 1000 L 71 4433 * * 4252 4150 * 5843 1918 3736 3882 3786 6652 4678 3731 3523 5784 * 3544 * 4954 71 56 * 4716 * * 0 * 7626 0 1000 Q 72 3827 * 4604 3169 6296 5169 * 3152 3912 4613 * 4539 * 3976 5526 2847 4001 2417 * * 72 93 * 4007 * * 1010 990 7615 0 2649 P 73 3994 * 2232 4849 * 1896 * * 4295 * * 3793 4129 4998 3972 3419 5445 6053 * 6146 73 0 * * * * 0 * 7594 0 4084 Q 74 3020 * 3424 3852 * 3485 5447 6900 3010 6203 * 2505 5191 4256 4563 2664 * * * * 74 63 * 4553 * * * * 7702 0 0 G 75 3727 * 4320 * * 1698 5604 5665 4237 6532 * 2712 6129 4614 3177 4987 3338 6228 * * 75 131 4511 4546 1768 502 680 1412 7707 2827 3177 Q 76 3094 * 6099 * 5390 3930 * 2282 5078 5056 6591 4879 * 4470 4840 3293 2668 3219 * 5486 76 0 * * * * 257 2616 7664 0 3731 I 77 4906 * * * 3497 * * 1718 * 2801 6602 6028 * * 6161 * 4438 2437 6460 2748 77 18 6320 * 2807 222 0 * 7705 1000 1000 V 78 4115 * * 6326 * 6133 * 2038 * 3739 * 6436 6168 * 4478 4276 2613 1947 * 4254 78 13 * 6828 * * * * 7702 0 0 L 79 6939 * 6357 * 6632 * * 1763 4059 1950 6028 * * 5504 5237 4685 6368 2132 * 6253 79 72 4366 * 1885 456 * 0 7693 3263 1000 S 80 4160 * 6202 3687 5608 5010 * 3410 3611 4276 * 6815 5588 5608 2250 2769 4898 3124 * 5765 80 44 5056 * 1603 576 * 0 7705 2465 1000 R 81 3704 * 5604 4104 * 5863 4663 * 2337 4647 6539 5699 2694 4846 1972 4183 * 5586 * * 81 42 5723 6685 2126 375 * 0 7705 1841 1000 L 82 2321 * * 4553 * 5282 6531 4570 4671 3359 6677 6362 3244 3921 3726 3623 3316 3455 * * 82 89 4438 6160 2444 293 1000 1000 7750 2848 1796 P 83 2885 * 4082 3712 * 5587 * * 4284 * * 4805 1709 3797 3591 3540 4444 6303 * 5969 83 32 5530 * 1970 425 * 0 7731 1707 1750 T 84 1637 * 4652 3832 * 4681 * 6140 4978 * * 6306 3843 3965 5061 2908 3581 3659 * 6470 84 29 6689 6579 1000 1000 * 0 7726 1000 1750 A 85 2221 * 5081 5181 * 6757 6802 6415 3728 4168 * 5711 2960 5600 5961 2922 3592 2571 * * 85 97 4161 6747 2976 196 1469 646 7740 3158 2227 N 86 3371 * 4873 3700 6350 4454 6959 5338 4077 4430 * 4256 3013 3357 * 2236 4123 4250 * * 86 0 * * * * * 0 7751 0 2245 G 87 2669 * 3642 3888 * 4627 * 4878 4095 3984 5405 * 4968 5052 5331 2766 2643 3621 * * 87 53 5579 6065 3469 137 * 0 7724 1679 2245 D 88 2907 * 4759 3066 * 4055 * 5436 3339 6453 * 4317 3458 3638 4485 2740 3693 5402 * * 88 18 6366 * 3907 100 956 1046 7694 1000 2676 G 89 2443 * 3276 4618 * 3527 * 5608 4658 4127 * 4058 3772 4585 5321 3099 3120 4780 * * 89 0 * * * * * 0 7684 0 1717 G 90 2997 * 4904 4313 * 2303 * 5127 4097 5365 * 4023 3206 * 6160 2233 4153 5364 * * 90 20 6207 * 1585 585 0 * 7655 1000 1717 A 91 1900 * 3774 6328 * 3787 * 4896 4295 5439 6176 4736 4470 6423 6303 3207 2775 3453 * * 91 59 6011 5363 2807 222 * * 7712 1000 0 L 92 3266 * 3971 5178 6441 6021 * 4033 5104 2644 5463 5438 3584 3501 * 5038 3093 2743 * 6247 92 50 5409 6540 1743 512 0 * 7608 1719 1678 A 93 3223 * 3888 3894 * 6175 * 4981 6137 6024 * 6259 5962 2584 3771 4573 2133 2796 * * 93 17 * 6416 * * * 0 7578 0 1000 L 94 3370 * 6054 5845 4953 4570 * 3605 * 1019 6058 6060 * 5457 * * 3964 3264 * * 94 20 6177 * 0 * 931 1072 7518 1000 1687 D 95 2875 * 3004 2830 * 3470 5767 * 5051 6234 * 3619 3269 3362 * 3059 5128 6031 * * 95 0 * * * * * 0 7468 0 1000 S 96 3397 * 5523 2191 * 5955 * * 3343 6067 5847 6061 2602 6253 6028 3668 2321 6034 * 6050 96 121 3995 5831 1502 629 0 * 7486 2852 1000 L 97 5690 * * 5184 * 5866 6030 1486 * 2878 5330 * * * 5866 * 3471 1759 * * 97 21 6106 * 1000 1000 0 * 7444 1000 1000 T 98 * * 3896 3794 * * 6146 3954 6132 4875 * 4016 * 5009 3709 3085 1739 3137 * 4908 98 46 4989 * 614 1529 * * 7474 1826 0 V 99 * * * * * * * 1826 * 4225 * 5888 * 5635 * 5899 * 711 * * 99 18 6310 * 1000 1000 * * 7390 1000 0 L 100 5899 * 5823 4867 * 6064 * 3553 3604 4336 * 6032 * 4042 3163 3501 1510 4697 6040 5753 100 21 6130 * 1585 585 * * 7390 1000 0 G 101 2222 * 4805 * * 752 * * 5759 * * * 5780 * * 4013 4120 * * * 101 34 * 5415 * * * * 7328 0 0 A 102 1906 * * 5624 * 5336 * * 3084 * * 3254 5475 3989 3928 3688 2400 4409 * * 102 0 * * * * 0 * 6969 0 1000 G 103 2875 * 4304 5137 * 2108 * 4161 3952 * * * * * 1995 3615 4949 3892 * * 103 0 * * * * * * 6663 0 0 G 104 3943 * 5104 5134 * 1274 * 4808 4899 5249 * * 5019 5057 * 5235 3488 2381 * * 104 0 * * * * * * 6274 0 0 N 105 3854 * 3066 2820 * * * * * * * 2404 3172 * 2599 4029 2800 * * * 105 0 * * * * * * 6265 0 0 N 106 4744 * 1631 3714 * 3781 * * * * * 2403 2660 4699 * 3250 * * * * 106 0 * * * * * * 6187 0 0 A 107 330 * * * * * * * * * * * * * * 2291 * * * * 107 0 * * 0 * * * 5263 0 0 //