HHsearch 1.5 NAME c2m2jA_ FAM FILE c2m2jA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2m2jA_.a3m DATE Sat May 11 08:25:33 2013 LENG 71 match states, 71 columns in multiple alignment FILT 60 out of 64 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.8 EVD 0.4485 1.0226 SEQ >ss_dssp CCCEECCHHHHHTSCCSEEEEEEEESSCHHHHHHHHHHHHHHTTCSEEEEEEEEESSSSSEEEEEEEEECC >sa_dssp EEBEDBEEEEBEEEECDDEBDCEBEEEDEDEACECACEDADDDDBDBACCDDDCEDEEECCCCABACABEE >ss_pred CCCCCCCHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEEC >ss_conf 96500787688224410479994378998999999999999639975999997517888739999999809 >Consensus xAAxEIxxxqaxxlxxxgtIsVsgxxxsxxdxxxxlxxkAdxxGAxyyxIixxxexxxxxxxxxtAxlYka >c2m2jA_ HAATELTPEQAAALKPYDRIVITGRFNAIGDAVSAVSRRADEEGAASFYVVDTSEFGNSGNWRVVADVYKA >UniRef50_P76177(105-174:314) Protein ydgH n=146 Tax=Enterobacteriaceae RepID=YDGH_ECOLI E=4e-13 s/c=1.08 id=30% cov=100% NGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYK- >UniRef50_B2PYR3(20-88:89) Putative uncharacterized protein n=3 Tax=Providencia RepID=B2PYR3_PROST E=1e-11 s/c=1.02 id=29% cov=97% --ATEINYTKSLYLKFAGTVNVVMNDGVSADYVKAISQKADEKGAEYFVITSVESEGSGNDVSVTASLYK- >UniRef50_B5PFA9(23-87:87) Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537 RepID=B5PFA9_SALET E=3e-10 s/c=1.02 id=17% cov=93% -AATEISHPET-DMKEVAHVSVSSINTNPESIIQLLQNKTEASGAHYYRITSFHIDNQS---HATAILYK- >UniRef50_A4TRM9(37-103:103) Lipoprotein n=32 Tax=Yersinia RepID=A4TRM9_YERPP E=6e-15 s/c=1.22 id=26% cov=96% --AQEITRAQSLRLQKVGTVSAQ-VYGSPGDVETEIQRRANASGAPYYLIVMISDSVYPGIWYANALLYR- >UniRef50_D0FQK4(23-91:91) Conserved uncharacterized protein n=13 Tax=Enterobacteriaceae RepID=D0FQK4_ERWPY E=8e-14 s/c=1.13 id=27% cov=99% -AATQVNESQASSLHSMGTVSISGARGTLDDATHKLAKKADAMGASSYRIIGVTNPADSSLWFGNAEIYR- >UniRef50_D2TN30(19-91:91) Putative exported protein n=2 Tax=Enterobacteriaceae RepID=D2TN30_CITRO E=1e-11 s/c=0.97 id=31% cov=100% QSAIEIDHQQARNMedvQSLGVIYINHHVATESEAVKALNDEADARGAKYFSVVLIREPGSNGNIHPSAEIYR- >UniRef50_C9Y162(22-90:91) Uncharacterized protein yjfN n=12 Tax=Enterobacteriaceae RepID=C9Y162_CROTZ E=7e-14 s/c=1.13 id=23% cov=99% QSAEEVNADRVTGLNEIGVISVNDISGTPQEIEKVIAYKADEQGAAYYRIIQMHENQRPDNWHVQAIIY-- >UniRef50_B1LDB8(22-86:86) Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=B1LDB8_ECOSM E=0.001 s/c=0.69 id=27% cov=31% ---------------------------------SQIKEKAEELQASNYYISSFS----------------- >UniRef50_D0Z9P7(21-89:89) Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=D0Z9P7_EDWTE E=2e-09 s/c=0.93 id=19% cov=99% -AASQIDARQAMDQQRIGAVRIQIPNGTLDQTVDALAQKTAQQGGDYFHITSIGSTGMGSSITATAEIYK- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * H 1 * * * * * * 3421 * * * * 2246 * 523 * * * * * * 1 0 * * * * * * 2836 0 0 A 2 314 * * * * 3509 * * * * * * * * * 3218 * * * * 2 0 * * * * * * 4574 0 0 A 3 133 * * * * * * * * * * * * * * * * 3508 * * 3 0 * * * * * * 4849 0 0 T 4 * * 2880 4100 * * * 3543 3885 5429 * * * 2537 * 4032 1803 3196 * * 4 0 * * * * * * 4849 0 0 E 5 5940 * * 424 * * * * * 4065 * * 4436 3497 * 5289 * 5759 * * 5 0 * * * * * * 4954 0 0 L 6 * * * * * * * 838 * 1799 5427 * 5912 * * * * 3138 * * 6 0 * * * * * * 4971 0 0 T 7 * * 3492 * * * * * * * * 2014 3664 * 4292 2024 1797 * * * 7 0 * * * * * * 4971 0 0 P 8 2817 * * 5554 * * 4209 * 2159 6738 * 3270 3547 4521 2610 3749 5467 * * 4160 8 0 * * * * * * 4971 0 0 E 9 2510 * 3880 2128 * * 5607 * * 5427 * 5077 5086 2231 4985 3800 3611 5220 * * 9 0 * * * * * * 4971 0 0 Q 10 5533 * 2834 2782 * * * * 4007 * * * 5912 888 5210 * 4424 * * * 10 34 5404 * 2000 415 * * 4971 1000 0 A 11 702 * * * * 5187 * 5220 * * * * 5404 * * 2922 2950 4437 * * 11 71 5756 5086 1000 1000 * * 4971 1000 0 A 12 2320 5501 * 5072 * 3603 5122 * 5357 4103 3695 3754 * 3609 4418 3689 5148 3087 * 4299 12 0 * * * * 0 * 4921 0 1000 A 13 3437 * 2990 4345 * 3434 * * 3084 3752 5555 2975 * 2973 4406 3459 * * * 4881 13 0 * * * * * * 4975 0 0 L 14 5942 * * * * * * 5383 5826 833 2414 * * 4190 4404 * * 5814 * 3770 14 107 3813 * 1408 682 * * 4970 1654 0 K 15 * * * 2600 * * 3826 * 2401 5445 5738 5239 * 1730 4140 4167 5236 3909 * * 15 34 5404 * 1000 1000 * * 4970 1000 0 P 16 4337 * * 3606 4890 * 4537 * 2068 * * * 1460 * 5005 2658 * * * * 16 0 * * * * * * 4970 0 0 Y 17 3467 * * * 2218 * * 2438 * 3647 2823 * * * * 4465 4335 2687 * 4684 17 26 5807 * 0 * * * 4970 1000 0 D 18 4168 * 2345 5206 * 716 * * 4537 * * * * 4654 * * * * 5116 * 18 13 * 6768 * * * * 4970 0 0 R 19 3726 * * * * * 4163 * * * * 5103 * 5200 4130 2572 1347 2514 * 5732 19 0 * * * * * 0 4971 0 1000 I 20 * * * * * * * 1039 * 4254 * * * * * * * 1117 * * 20 0 * * * * 0 * 4984 0 1000 V 21 4377 * * * * * * * 5619 * * 4910 * * 5029 887 2005 4863 * 4524 21 0 * * * * * * 4982 0 0 I 22 3559 * * * 3934 * * 2712 * 4467 * * * * * 5505 5541 717 * * 22 0 * * * * * * 5048 0 0 T 23 * * * * * 4132 5413 * * * * 3164 * 3395 * 1414 1714 4936 * * 23 180 * 3089 * * * * 5062 0 0 G 24 4206 * 4465 3758 * 1014 3232 4955 5406 * 4015 4490 * 6143 * 4358 * * * * 24 67 * 4460 * * 0 * 4903 0 2417 R 25 3634 * 3632 5434 3727 * 5327 3449 4830 3692 * 3312 4916 5640 2406 * * 2568 * * 25 25 * 5868 * * * 0 4955 0 1000 F 26 3922 * 3138 * 2577 3655 5415 * * * 5712 3976 * * 4608 3241 3666 3650 * 2625 26 56 * 4715 * * 0 * 4944 0 1552 N 27 4016 * * * 5217 1523 * 4312 * * * 1958 * * 5378 3633 2727 * * * 27 122 5257 4191 1000 1000 0 * 5022 1000 1554 A 28 3096 * 5809 * * * * * * * 5194 2808 * * * 1280 2003 4883 * * 28 29 * 5637 * * 0 * 5061 0 1652 I 29 * * * 3827 * * * 3218 * 2291 3847 * 1530 3770 * 4869 5575 3765 * * 29 0 * * * * 0 * 4845 0 1000 G 30 3829 * 2404 3925 * 3661 * * * * 2754 4165 3691 4499 5266 2452 4636 * * 5564 30 38 * 5263 * * * * 4964 0 0 D 31 3946 * 1097 1746 * * 5591 * * * * 4915 * 3800 * 4514 * * * * 31 0 * * * * * 0 4798 0 1000 A 32 1585 4526 * * * * * 2951 * 2654 4013 * * * * * 5139 2177 * 5412 32 0 * * * * 0 * 4798 0 1000 V 33 4827 * 4700 3048 * 4555 4976 5171 3928 5265 3672 3752 * 4369 3083 3635 4568 2557 * * 33 0 * * * * * * 4797 0 0 S 34 3807 * 2757 2647 * * 3518 * 3635 * * * * 3172 3562 2956 3460 * * 4724 34 0 * * * * * * 4841 0 0 A 35 1630 * 4180 2347 * * * * 2986 5179 4846 5600 * 2877 * 5219 * 4240 * * 35 0 * * * * * * 4789 0 0 V 36 5534 * * * * * * 1485 * 1002 * * * * * * * 3036 * * 36 0 * * * * * * 4732 0 0 S 37 1562 * 5554 * * * * 5982 3579 * * 3418 * 2885 4833 1961 5659 * * * 37 0 * * * * * * 4732 0 0 R 38 3154 * 4438 2958 * * 5859 * 1638 5542 * 4738 * 3111 2791 5898 5571 * * 5849 38 0 * * * * * * 4732 0 0 R 39 4213 * * 4671 * * * * 727 5117 4716 * * 3469 2781 * * * * * 39 0 * * * * * * 4732 0 0 A 40 142 * * * * * * * * * * * * * * * 3810 5468 * * 40 0 * * * * * * 4732 0 0 D 41 3261 * 905 3073 * * * * 3671 * 5554 4327 * 4949 5376 6326 * 5368 * * 41 0 * * * * * * 4732 0 0 E 42 1357 * 5090 1867 * * * * 2391 * * * * 3404 * 5571 * * * * 42 0 * * * * * * 4732 0 0 E 43 2920 * 5075 2789 * * * * 2245 3772 4255 * * 2589 3652 3168 * * * * 43 0 * * * * * * 4732 0 0 G 44 * * 5237 * * 152 * * 4540 * * * * 5042 * * * * * * 44 0 * * * * * * 4732 0 0 A 45 252 * * 5191 * 2914 * * * * * * * * * * * * * * 45 0 * * * * * * 4732 0 0 A 46 3045 * 3222 5762 * 5551 4574 * 2031 * * * 5032 4690 3928 2222 4122 * * 4704 46 0 * * * * * * 4734 0 0 S 47 3605 * * * 4716 4664 4615 * * * * 5042 * * * 2500 * * 5541 809 47 0 * * * * * * 4734 0 0 F 48 * * * * 1419 * * * * * * * * * * * * * * 676 48 0 * * * * * * 4734 0 0 Y 49 * * * * * * 3171 * 5016 5805 5671 * * 3914 1753 5602 * 1993 * 2429 49 0 * * * * * * 4734 0 0 V 50 * * * * * * * 297 * * * * * * * * * 2424 * * 50 58 * 4664 * * * * 4734 0 0 V 51 * * * * * * * 1657 4656 3585 5652 * * 5804 * 4974 2062 1995 * * 51 136 * 3471 * * * 0 4701 0 1277 D 52 2543 * 4299 * * 4661 5569 * * 3491 3552 4792 * 5640 2864 1636 5190 * * * 52 100 * 3900 * * * 0 4463 0 2438 T 53 4848 * * 5609 3135 3860 * 3376 5734 3121 2693 4534 * 2904 * * 3720 3003 * * 53 0 * * * * 2159 366 4644 0 2743 S 54 * * 3614 4558 * 4347 3535 4102 * * * 3207 * 4529 3590 2213 3439 5388 3401 5556 54 30 * 5625 * * 344 2236 4854 0 2593 E 55 4098 * 3188 1009 * * * 5135 4694 * * 4603 * 4072 * 2948 4736 * * * 55 108 * 3797 * * 621 1515 4843 0 1565 F 56 2181 * 4366 3626 5039 4943 * 4333 5820 4771 * 3699 2864 5196 * 3802 2722 5776 * * 56 129 4278 4891 1000 1000 * 0 4821 1269 2199 G 57 4615 * 5066 * * 1247 * 4407 * 5576 * 2746 * 3840 3354 * 6168 3415 * 6021 57 0 * * * * 390 2077 4808 0 2660 N 58 * * 2722 6161 * 2885 5373 5578 5649 * 5336 2758 * 3407 3245 2959 4946 3636 * 5619 58 29 5632 * 0 * 0 * 4884 1000 1342 S 59 5902 * 4227 4760 * 1624 5002 * * * * 3021 3175 3631 5052 2758 4484 * * * 59 67 * 4467 * * * * 4871 0 0 G 60 * * 2436 * * 1096 * * 5462 * * 3265 5468 5214 * 2548 * * * * 60 0 * * * * * 0 4817 0 1511 N 61 * * 5456 * * 5214 3922 4717 4000 5786 5522 1521 * 2504 4630 3689 4352 4259 * * 61 0 * * * * 970 1031 4817 0 1511 W 62 4338 * * * 4808 * * 3576 5378 3511 3408 * * 4200 * * 5508 3785 1334 3653 62 0 * * * * 0 * 4820 0 1000 R 63 * * * 5518 3604 * 1779 5500 * 5548 * 5615 * 5235 2616 4845 2868 4388 * 2928 63 0 * * * * * * 4871 0 0 V 64 1341 * * * * 2677 * 3414 * * * * 5557 * * 3652 * 1976 * * 64 0 * * * * * * 4871 0 0 V 65 * * 5615 * * * * * * * * 3163 * 3340 5644 2737 1305 2770 * 4384 65 0 * * * * * * 4871 0 0 A 66 71 * * * * * * * * * * * * * * 4388 * * * * 66 0 * * * * * * 4871 0 0 D 67 5235 * 2487 1809 5579 * * 2613 * 4612 * 5736 * 5971 * 5552 3759 3316 * 4208 67 0 * * * * * * 4871 0 0 V 68 * * * * 4384 * * 1673 * 1085 * * * * * * * 2581 * * 68 0 * * * * * * 4871 0 0 Y 69 * * * * 4097 * * * * * * * * * * * * * * 87 69 0 * * * * * * 4871 0 0 K 70 4960 * * * * * * * 888 * * * * * 1226 * * * * * 70 0 * * * * * * 4689 0 0 A 71 0 * * * * * * * * * * * * * * * * * * * 71 0 * * 0 * * * 2320 0 0 //