HHsearch 1.5 NAME c2m19A_ FAM FILE c2m19A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2m19A_.a3m DATE Sat Aug 10 08:32:09 2013 LENG 106 match states, 106 columns in multiple alignment FILT 105 out of 553 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4689 1.7031 SEQ >ss_dssp CCSCCCSSSSSCCEEEEEEEECTHHHHHHTCSEEEEEEETTCCHHHHHHHHHHHCGGGTTTTCBTTBSCTTCEEEETTEETTSSCSSSSCCCTTCEEEEE CCCCCC >sa_dssp EEEECDCEEEECDBBDACADACDDAEDCBEDECBECDBCEEBCABDAAECACEECECADDDADDEEDBCDEACACBEEECADEDEBCDCDBEEEBCABAD BDEEEE >ss_pred CCCCCCCCCCCCCEEEEEEEECHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCEEEEE CCCCCC >ss_conf 9852120268887089999972225754399469998589982899999999747302320135554343089999562213435666175798899996 888899 >Consensus xxxxxxxxxxxxxxMxixVxxfaxlrexxGxxxxxxxxxxxxTvxxllxxLxxxxpxxxxxxxxxxxxxxxixvxvNgxxixxxxxxxxxLxdgDeVaix PPvsGG >c2m19A_ GGGRDYKDDDDKGTMELELRFFATFREVVGQKSIYWRVDDDATVGDVLRSLEAEYDGLAGRLIEDGEVKPHVNVLKNGREVVHLDGMATALDDGDAVSVF PPVAGG >UniRef50_A6C6E9(1-92:92) Putative molybdopterin converting factor, subunit 1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6E9_9PLAN E=1e-06 s/c=0.59 id=18% cov=86% --------------MKIKVEYTAQVKKAAGTGTEEYEIPPGSTLQDLVKRVAETHStALKPLLFPDSDvLHPSILLFVSNEQVLWEE--PRTLEPQQVVS ILSPISGG >UniRef50_B2K3G8(1-91:91) ThiamineS protein n=2 Tax=Yersinia pseudotuberculosis RepID=B2K3G8_YERPB E=8e-09 s/c=0.67 id=16% cov=85% ----------------MKFKLSGNLAKFTNyKKELHIDIESSSTLKKLIDNLIEQYPALKEVIYDkELKVKKGYLFSFNGQKIN-PNEFNEPIKNNDCID IFTAIAGG >UniRef50_Q9HKF4(1-75:80) Putative uncharacterized protein Ta0647 n=1 Tax=Thermoplasma acidophilum RepID=Q9HKF4_THEAC E=4e-05 s/c=0.65 id=20% cov=72% --------------MRIRIRVLSHFSSALGFDESSFSIGEGITFAELRSKLIEQFSAFVRPIE--------IGMYVNMKPVPD----DYTMMDGDIVYVF P----- >UniRef50_A6VX23(3-84:84) ThiamineS protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VX23_MARMS E=3e-07 s/c=0.69 id=22% cov=78% ---------------KVRVVFFASLKESIGQSEYIAVLTLPLSIGELKQQLANELDKGQVL------LAKGIQSSIDFEFARDADIVPDSVN---EVAFF PPVTGG >UniRef50_P0C919(2-90:90) Molybdopterin synthase sulfur carrier subunit n=7 Tax=Diptera RepID=MOC2A_DROME E=7e-13 s/c=0.84 id=20% cov=85% --------NADGPVVNVHVLFFAKSRELANTPRSTVEVPTEITATELLDHLVSKFG--------LTSIRDNLILAHNESYIDNLSD-RILFKEGDELAII PPLSGG >UniRef50_Q7Q6I6(3-109:109) Ubiquitin-related modifier 1 homolog n=3 Tax=Culicidae RepID=URM1_ANOGA E=1e-06 s/c=0.51 id=20% cov=94% -------DSIDEEVIsggsTITVEFSGGAETLFGGVKEHIVPLDGSKIvllEEMLRWLRDHlLTGDAGLFLQENTVRPGILVMINDTDWDLMGETEYILQ PGDHILFISTLHGG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1606 0 0 G 2 * * * * * 1044 * * * * * * * * * 957 * * * * 2 0 * * * * * * 2495 0 0 G 3 * * * * * 395 * * * * * * * 2061 * * * * * * 3 0 * * * * * * 2495 0 0 R 4 * * * 2111 * * * * * * * * * 2430 1303 * 2493 * * * 4 0 * * * * * * 2808 0 0 D 5 2493 * 2199 726 * * * * * * * * * * * * * * * * 5 0 * * * * * * 2808 0 0 Y 6 2415 * * * * 2493 * * * * * * * * * * * 2111 * 1310 6 0 * * * * * * 2808 0 0 K 7 * * * 2471 * * * * 934 * * * * * * * * 1756 * * 7 0 * * * * * * 3159 0 0 D 8 * * 679 2805 * 3196 * * 3023 * * * * * * * * * * * 8 0 * * * * * * 3861 0 0 D 9 * * 1705 3172 * 3552 * * * * 3355 3503 * * 3301 2254 * * * * 9 0 * * * * * * 4322 0 0 D 10 1506 * 3460 * * 3717 * 3070 3270 * * * * * 2570 * 3476 * * * 10 0 * * * * * * 4453 0 0 D 11 * * 1149 3415 * 2273 * * 2591 * * * 3597 * * * * * * * 11 0 * * * * * * 4453 0 0 K 12 3398 * 3351 1934 * 3750 * * 2542 * * * * 3845 2749 * 3624 * * * 12 0 * * * * * * 4556 0 0 G 13 4312 * 4081 1427 * 1870 * * 2951 * * * 4034 * * 4191 * * * * 13 0 * * * * * * 5012 0 0 T 14 4256 * * * 4136 4031 * * * * 4100 * 3578 * 3754 2978 1578 2721 * * 14 0 * * * * * * 5507 0 0 M 15 * * * 4757 * 6054 * 3148 * 5632 428 * 5942 * 6367 * * 4530 * * 15 76 4848 5887 1382 698 * * 7125 1589 0 E 16 3795 * 5104 3071 * 5048 * 5925 2155 5252 4935 4204 5982 3765 3125 3508 3512 5981 * * 16 0 * * * * * 0 7227 0 1000 L 17 * * * * 5007 * * 1598 * 3187 3097 * * * * * 5027 1453 * 5980 17 14 6692 * 1585 585 0 * 7535 1000 1000 E 18 6792 6388 5006 3770 5721 * 5459 * 1928 5523 * 5513 6500 4711 2796 4569 1952 4938 * * 18 0 * * * * * * 7580 0 0 L 19 5626 6532 * * 4979 * * 1657 * 3832 * * * * * * 6457 919 6708 * 19 0 * * * * * * 7583 0 0 R 20 6446 * 6412 3028 6463 * 4853 5430 1891 2355 * * * 5449 2516 6353 4855 4098 * 5882 20 0 * * * * * * 7583 0 0 F 21 5648 4668 * * 1547 * * 4384 * 1882 * * * * * 6619 * 3832 * 2330 21 0 * * * * * * 7583 0 0 F 22 5649 * * * 979 6180 * 5734 * 2976 4818 * 3351 * * 4451 4968 6412 6180 3709 22 0 * * * * * * 7583 0 0 A 23 1113 6661 * * * 1379 * 5950 * 6605 * 5703 6263 * 5710 4380 5829 * * * 23 0 * * * * * * 7583 0 0 T 24 3499 * 5701 5656 5005 3693 4565 5694 3567 4674 6788 6557 3415 3127 4194 3392 3858 4390 4441 4703 24 13 * 6805 * * * * 7583 0 0 F 25 2941 4762 * * 2966 5979 * 3668 * 1172 * * 4719 * * 6711 * 3603 * 4764 25 0 * * * * * 0 7590 0 1000 R 26 2944 * * 3807 * 5465 5683 * 2928 * * * * 4729 1212 3656 4901 5808 * 5320 26 33 6442 6502 2585 263 0 * 7590 1000 1000 E 27 4996 * 2212 1466 * * 6402 5969 4383 4727 6541 6423 4867 4201 5149 3962 4549 6298 * 5750 27 0 * * * * 0 * 7567 0 1000 V 28 3203 6458 4593 4696 3905 4880 5133 3573 3403 2542 5072 * * 4565 4844 5716 5050 3402 * 3839 28 16 6539 * 1000 1000 * * 7604 1000 0 V 29 2253 6458 * * 3417 * * 3103 * 2720 5420 * * * 6369 5447 2276 3162 * 4625 29 41 6854 5702 0 * * * 7604 1000 0 G 30 * * 4908 5047 6354 618 5490 * 3139 6799 * 4012 4153 * * 6713 * * * * 30 41 5710 6831 1292 757 * 0 7589 1575 1617 Q 31 5173 4070 5521 4009 4573 3037 6562 4067 1940 5079 5596 6213 * 5258 3848 5684 3526 4241 6004 * 31 91 6527 4316 1000 1000 0 * 7591 1000 2317 K 32 4024 * 2876 3724 * 4677 4167 * 3324 4273 * 4652 4067 4909 3334 3284 3312 5558 * 5392 32 46 5487 6763 1796 490 771 1272 7628 1655 3103 S 33 4344 * 3458 1514 4552 4525 4954 5464 3996 6467 * * 6406 3873 3650 3688 4727 5665 * * 33 54 5712 5840 2151 368 0 * 7636 1525 1721 I 34 6758 6616 3276 2443 4385 * 5049 2990 4583 3117 5743 * * 4263 5004 5670 5114 2638 * 5544 34 35 6049 6829 1000 1000 0 * 7601 1000 1694 Y 35 5809 * 3871 2363 7099 * 4922 3402 4171 4628 6940 5134 6678 3608 4592 3347 2885 4326 5760 5900 35 48 * 4933 * * 0 * 7668 0 1000 W 36 6714 * 5826 5314 3585 * 6675 2340 5481 1777 5013 * * * 5714 6483 * 2316 5251 4195 36 42 6877 5607 0 * 1867 462 7620 1000 2095 R 37 4943 * 2991 1755 4660 * 5769 4425 5767 5124 * 4352 4241 4392 4572 4317 3529 3930 * * 37 39 * 5213 * * 1978 423 7621 0 2648 V 38 3688 4991 6473 5466 3675 6792 * 2409 * 2040 6258 5597 5467 6437 * 4847 5556 2357 5701 * 38 100 6776 4118 0 * 579 1597 7643 1000 3281 D 39 3160 * 3293 3175 * 3855 6576 5504 6274 4237 * 5148 2179 4304 5556 3410 3653 6232 * * 39 51 6303 5490 0 * 0 * 7634 1000 3750 D 40 3771 6590 2743 2344 6798 3570 4802 * 3968 5117 * 5229 4153 4456 4320 2829 5107 * * * 40 42 6277 5989 0 * 830 1193 7650 1000 1547 D 41 4051 5629 4414 3613 * 1528 * 5239 5622 6706 * 2855 3239 5783 6615 3836 6813 4785 * * 41 79 * 4237 * * 1498 630 7662 0 2004 A 42 2980 5618 5779 4420 4946 4993 * 3777 4334 4213 6721 4935 6529 4853 6581 2313 2893 3425 6585 6612 42 39 5236 * 0 * 664 1439 7651 1611 3725 T 43 6593 * 4281 6429 * * * * 4984 5562 * 4141 6583 * 5906 3068 600 6492 * * 43 15 6634 * 0 * 527 1709 7659 1000 2120 V 44 5197 * * * 5040 6680 * 2248 * 1927 5537 6822 5039 5674 6486 * 5697 1521 * * 44 31 6512 6572 1585 585 0 * 7660 1000 1000 G 45 3095 * 4215 3283 * 2556 5133 * 3636 4693 * 4249 6894 3929 2350 4531 4933 6653 * * 45 0 * * * * * 0 7653 0 1000 D 46 3161 6487 1776 1926 * 5029 * * 4552 * 6674 4633 * 3942 5337 5034 4339 5719 6639 * 46 0 * * * * * 0 7653 0 1000 V 47 3964 6700 * * 4437 * * 3520 * 873 5698 * * * * * * 2198 6692 * 47 0 * * * * * 0 7653 0 1000 L 48 * 5558 * 6487 4793 * * 2259 3879 1547 4571 * * 5734 3704 * 6702 2814 6256 6637 48 0 * * * * 0 * 7653 0 1000 R 49 3478 * 2523 2233 6843 4739 6705 * 3026 4420 * 5607 6613 3731 3710 3816 4753 7020 * * 49 23 * 5955 * * * * 7665 0 0 S 50 2742 * 6514 2919 4970 4819 4472 4302 3682 3632 4654 4297 * 4377 3723 4515 5845 5825 4755 4174 50 12 * 6912 * * * 0 7662 0 1536 L 51 4550 * * * 4763 6042 * 3034 * 647 4433 * * 6303 * 6675 * 3718 * * 51 83 * 4159 * * * 0 7658 0 2005 E 52 3206 5597 4623 2265 4204 3864 * 3011 4442 5102 5085 4828 6256 * 4510 3783 5861 3687 * 6488 52 19 * 6293 * * * 0 7620 0 3414 A 53 3388 * 4511 2002 * 4350 * 4837 3346 6385 * 4055 5579 3393 4153 3462 3708 5891 * * 53 18 6368 * 0 * 2080 389 7605 1000 3434 E 54 3629 * 3992 3136 * * 6376 4251 2669 3809 5503 4474 6699 3258 2358 6861 4713 5244 * * 54 47 5478 6667 1471 645 * 0 7612 1599 3085 Y 55 4844 * 6234 4528 3339 3629 3294 6270 5156 3897 * 4583 * 5592 4995 5516 * 4479 6483 1527 55 95 5060 4884 3338 150 2405 302 7604 2114 3314 D 56 4868 * 4164 4659 * 3200 6175 5276 6217 6428 * 4949 1019 5035 4845 4135 5492 5230 * * 56 43 6683 5664 0 * 1632 562 7550 1000 3993 G 57 2911 6627 3281 2336 * 2933 * 6565 4044 5522 6738 5501 3930 3500 4710 5603 4684 4714 * 6511 57 13 * 6853 * * * 0 7570 0 3833 L 58 3798 * 4719 5294 3653 5564 * 4230 4423 1401 6814 5530 5063 4893 6296 5494 5646 4488 5067 4009 58 27 6835 6692 0 * 2919 205 7565 1000 4019 A 59 2722 * 6197 2983 3471 4926 6415 6511 2775 4130 5798 * 6711 4659 2918 4825 4949 4276 5619 5621 59 94 * 3986 * * * 0 7559 0 4070 G 60 4220 * 4568 2397 6303 3890 6306 * 2899 3440 * 3741 4836 5332 3133 3317 * 5515 6482 6232 60 59 * 4644 * * 2769 229 7510 0 4981 R 61 3179 * 3931 3059 4458 6478 4593 6500 3266 3304 4976 5366 5574 4960 2820 5518 6684 5302 4870 4388 61 129 6659 3720 0 * 2580 264 7477 1000 5159 L 62 4870 * 4254 * 2683 6146 6129 2745 4527 1694 6515 4688 6167 * * 5261 6338 2992 * * 62 34 * 5427 * * * 0 7447 0 5600 I 63 3435 5294 4061 3618 2818 * * 3494 6474 2132 * 5206 6415 6448 4539 6132 * 3705 6572 3718 63 152 3722 5353 1402 686 2844 216 7436 3348 5628 E 64 4162 6300 2048 3252 6193 4905 6396 6496 3497 * 6321 3153 4048 4132 6091 4750 2922 * * * 64 183 4068 4068 0 * 2449 292 7455 3315 5470 D 65 3698 * 2071 2808 6317 2764 5403 4381 6031 5484 * 3316 6050 4919 6431 3778 * 6519 * 5103 65 354 2513 4554 676 1418 2555 269 7430 4682 5637 G 66 4430 6448 3385 3023 5211 1744 6555 5370 5316 4584 * 4530 5062 * 3970 3156 5393 6366 6508 * 66 35 6336 6426 1000 1000 1893 453 7451 1000 5573 E 67 3463 * 3646 2403 * 4950 5914 * 3027 3862 * 4434 4910 6478 3264 3804 3829 4741 6556 6042 67 83 4867 5520 3203 166 4057 89 7508 2243 5333 V 68 5416 6244 5467 5563 4415 * * 2461 4395 1636 4298 * 4198 * 5675 * 5542 2620 * 6283 68 54 5425 6204 1323 737 1987 419 7511 1685 5221 K 69 3088 6490 * * 6124 4868 4842 3347 3027 3700 6141 4283 * 5574 1519 * 6465 4946 * 6554 69 61 * 4594 * * 2867 213 7495 0 5120 P 70 3565 * 3697 3324 6542 * 4679 5426 3962 5557 6494 4922 2523 5498 2951 2898 4427 5057 * * 70 13 * 6758 * * 1810 484 7521 0 5130 H 71 3068 6495 4574 5474 3071 2587 3872 6866 4539 6548 6688 4526 5434 5022 4902 3512 4888 4608 * 3534 71 40 * 5182 * * 1372 704 7549 0 4674 V 72 4962 4100 5584 * 3767 7078 5700 2013 * 2610 4687 * * * 6315 4747 4399 2338 * 4532 72 16 * 6497 * * 1542 607 7579 0 4251 N 73 4331 * 5403 * * 5586 * 2525 6385 3282 3665 2395 * 4368 2571 4100 4459 5665 * 6932 73 23 * 5996 * * 689 1396 7616 0 3601 V 74 4909 5832 * * 3467 * 5393 1925 * 3737 5219 * * 5009 * 6679 5563 1372 * 5539 74 0 * * * * * 0 7596 0 2614 L 75 2052 * * 5790 2888 * * 5483 * 1906 3817 6581 * * * 3141 5014 6697 6796 3793 75 30 * 5606 * * 1652 553 7596 0 2614 K 76 6632 6632 * * 6552 * 4519 2291 5121 2815 6230 * * 5868 6422 6255 6588 1072 * 6794 76 31 * 5534 * * * 0 7609 0 2896 N 77 5637 6610 2786 6419 * 4304 6762 * 6233 * * 568 * 6142 6204 5138 * 6768 * * 77 50 6389 5480 2000 415 1784 495 7581 1000 3491 G 78 5503 6351 2862 4725 4600 1123 6640 * 5125 6537 5693 5045 6523 3971 4541 5583 4887 6799 6705 * 78 16 * 6544 * * * 0 7554 0 3484 R 79 5754 6237 4597 2119 * * 5849 6537 3792 6497 4994 4921 * 3114 2175 5685 3814 3593 * 6558 79 87 * 4093 * * 2783 226 7545 0 3695 E 80 6472 * 2358 4471 3477 * 4022 3666 6461 4595 5037 2996 4429 5394 4426 4070 * 4720 * 3385 80 31 * 5536 * * 3363 148 7520 0 4371 V 81 2639 5816 * * 6191 * * 1979 * 3180 * 5653 * 6697 6312 4973 4872 2023 3875 5515 81 90 * 4052 * * 2698 241 7504 0 4489 V 82 4469 * 3615 2409 * 6390 5396 6070 3442 5537 6390 3836 3629 4109 3148 3197 4153 5503 * * 82 147 6375 3555 2000 415 3168 170 7451 1000 4966 H 83 4713 * 3353 3886 3054 6696 3165 3740 5568 3495 6435 3929 3765 6336 4466 3763 * 4637 6447 4777 83 167 * 3190 * * 1879 458 7360 0 5742 L 84 4451 * 3799 4946 5299 5885 6177 6373 4470 1719 4259 3890 3437 3895 5174 4786 4781 4227 * * 84 36 6291 6367 3585 126 2044 401 7310 1000 6098 D 85 3131 6194 2380 2956 * 2655 * * 4077 5638 * 5443 6266 3191 6045 3743 4200 5425 * * 85 92 * 4023 * * 1815 483 7394 0 5586 G 86 4389 * 3112 3930 6307 1626 5066 4762 4050 6010 5375 4533 3862 6669 3854 4320 6214 6239 * * 86 50 * 4867 * * 2049 399 7404 0 5537 M 87 5038 * 4155 3827 4210 5368 * 4872 3935 1706 4503 * 3953 5284 4661 5449 5459 3685 4713 5430 87 15 * 6643 * * 627 1504 7453 0 5620 A 88 3844 * 1620 3113 * 4576 * * 3872 * * 2980 4572 4847 3784 4140 4432 * * * 88 55 * 4737 * * 2833 218 7590 0 3264 T 89 2501 6320 4563 4809 * * 6335 5568 5031 5534 * * * 3694 3746 3960 1943 3658 * 3444 89 37 6217 6356 2585 263 806 1224 7579 1000 4027 A 90 3223 * * 3675 * * 6224 4191 3165 4374 6578 * 1800 4426 4614 5550 4407 3170 5491 * 90 59 5575 5720 2541 272 1162 855 7639 1698 2860 L 91 6838 * * 6196 5141 * * 2520 * 825 6672 * * * * * * 2316 * * 91 0 * * * * 2025 407 7625 0 2685 D 92 2686 6628 7028 3343 6639 4310 5108 * 1936 * 6684 4654 4853 4667 3739 3318 4372 6720 * 5564 92 42 * 5116 * * 2000 415 7629 0 2444 D 93 3255 * 1261 2524 * 4697 4261 * 5073 * * 3535 4108 6033 * 6266 6478 * * * 93 37 6928 5881 2000 415 1610 572 7615 1000 3061 G 94 5346 * 4035 6426 * 703 * 4867 5945 * 5721 3372 * 4627 6557 4962 5009 6928 * * 94 19 * 6288 * * 1459 653 7635 0 3023 D 95 4140 6787 445 4211 * * * * * * * * * 4295 5584 4312 * 6417 6418 * 95 0 * * * * 0 * 7624 0 2745 A 96 4751 6608 5696 1075 * * 5679 5764 4754 4622 * 5703 6465 6866 3555 6847 3246 3398 * 6646 96 11 7021 * 0 * * * 7665 1000 0 V 97 * * * * * * * 1844 * 2208 6482 * * * * * * 1018 * * 97 0 * * * * * * 7665 0 0 S 98 1392 * 4450 * 5447 4955 6387 4686 7036 3730 7021 * * 5206 * 3426 3387 3092 * 4526 98 29 6672 6634 2807 222 * * 7665 1000 0 V 99 * * * * 1831 * * 1443 * 2456 6485 * * * * * * 2666 * * 99 0 * * * * 0 * 7659 0 1000 F 100 6387 * * * 1993 * * 2224 * 1824 3383 * * * * 6745 4969 3985 5892 5425 100 0 * * * * * * 7665 0 0 P 101 6053 * * * 6730 4676 * * * 6285 6386 * 477 5491 * 3193 4517 * * 5802 101 0 * * * * * * 7664 0 0 P 102 3050 * * 6053 * * 6995 6695 * 6623 5568 * 622 * * 4234 4573 4383 5469 * 102 0 * * * * * * 7650 0 0 V 103 5040 * * 6346 3288 6658 * 1764 * 3243 4591 * * * * 5864 * 1372 * * 103 0 * * * * * * 7644 0 0 A 104 1692 * 6565 * * 3476 3359 * * * 6346 * * 5783 * 1563 3013 * * * 104 0 * * * * * * 7644 0 0 G 105 * * * * * 35 * * * * * * * * * 5402 * * * * 105 0 * * * * * * 7642 0 0 G 106 * * * * * 0 * * * * * * * * * * * * * * 106 0 * * 0 * * * 7644 0 0 //