HHsearch 1.5 NAME c2m0rA_ FAM FILE c2m0rA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2m0rA_.a3m DATE Fri Feb 1 11:44:05 2013 LENG 104 match states, 104 columns in multiple alignment FILT 113 out of 726 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.6 EVD 0.4113 -0.7591 SEQ >ss_dssp CCCCCCCSSSSCCSSCTTHHHHHHHHHHHHHHCTTTTTTSCCHHHHHHHHHHHCTTTSCGGGCTHHHHHHHTTCCTTCCCHHHHHHHHHHHHHHCCCSSS CCCC >sa_dssp EEEEEEEECEECEECDEEDDCEDEDBDCADDBAEEBDEEDACCDBADDBADDDCEECBDEEECCEDBCEDBDEDEEDECDDECBDDBCDCBDEEEDEEED EDEE >ss_pred CCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH HHCC >ss_conf 9822303868546425999999999999999601388985589999999999514678998999999999578889707099999999999997544424 3159 >Consensus xgxxxsxxxxxaxxxtxlExxixxlxxxFxkydxdgxxgxLsxxElkxllxxexxxxxxxxxxvxxixxxlDxdxDgxIdFxEFxxlixxlaxxxxxexx xrxx >c2m0rA_ MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPSNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERP VRGH >UniRef50_Q80VT8(2-85:92) S100 calcium-binding protein n=6 Tax=Rattus norvegicus RepID=Q80VT8_RAT E=0.0007 s/c=0.54 id=20% cov=80% -----------AQNLTSTEQEIMELLMILQEFSVK-KIDKLDVQEVKRLFREELPNFLKamDEATKNKILND----KGKEMPFDEIWDMIGRMALEYRKK ------ >UniRef50_UPI0000F2DD8D(156-255:261) PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2DD8D E=3e-05 s/c=0.49 id=20% cov=77% ---------------SDLEKAFATAALIYNNSSDPD--GKLSKAVAKNLLQTQFMNFIQGQEnkpKYKEILSEFEEQTESKLGFEDFMilllsvTLMSDL LQEIW-------- >UniRef50_P43304(603-693:727) Glycerol-3-phosphate dehydrogenase, mitochondrial n=67 Tax=Eukaryota RepID=GPDM_HUMAN E=6e-11 s/c=0.75 id=19% cov=86% --KSRSEQLTDRSEISLLPSDIDRYKKRFHKFDAD-QKGFITIVDVQRVL--ESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLMSAIQK------- ---- >UniRef50_A9V1Q9(49-143:549) Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9V1Q9_MONBE E=1e-07 s/c=0.61 id=16% cov=92% -SQRKSSRQTKSSNSVEFEQA---CLSVFRAADKDGN-GSLDAQEFWNVLHSQTLNLNLSDSEVNELRDAADTDKDGVISYEEFIPVVKELLRTIYARKD ---- >UniRef50_UPI00005A52FE(116-205:272) PREDICTED: similar to calmodulin-like 4 n=1 Tax=Canis lupus familiaris RepID=UPI00005A52FE E=0.0002 s/c=0.52 id=16% cov=30% ----------------------------------------------------------PTPGEVQRHLQSHKIDRDGELDFSTFLTIM------------ ---- >UniRef50_C1MUG4(614-714:716) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MUG4_9CHLO E=3e-05 s/c=0.49 id=21% cov=83% -----AESEKDSKAAAEFERTIANLWKAWLKDYDTDGSKTISLDELRAFASLPKCPSSDgymgdlwtwaseaeKDGTLEEAFKTVDEDGSGELEYPEFYA MLAE-------------- >UniRef50_UPI000180CA1E(401-497:661) PREDICTED: similar to predicted protein isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI000180CA1E E=8e-05 s/c=0.50 id=19% cov=90% ----QKISREEADPMMVMQKFLEDkrlrLVDLFRNFDKDLSW-KISPAEFKKGITDAEIPFTKLQ--LKNLMNSLDIDTDGQVNYREL--LIGKKEAVLK LREQRR-- >UniRef50_Q14ST5(4-92:101) Protein S100-A7 n=5 Tax=Eutheria RepID=S10A7_HORSE E=0.0004 s/c=0.51 id=18% cov=82% ---------------TEAEASVIGIIELFHKYTGRDD--MIDKPGLLKMLQDNFPNFlaacdKKGTDYLANVFEKKDKNRDKKIDFSEFLSLLGDIATDY HKQSHG--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2391 * * 305 * * * * * * * * * 1 0 * * * * * * 3092 0 0 G 2 * * * * * 472 * * * * * * * * * 1842 * * * * 2 0 * * * * * * 4327 0 0 Q 3 * * * 2372 * * * * 2091 * * * * 806 * * * * * * 3 0 * * * * * * 4146 0 0 C 4 5234 1489 * * * * * * 2512 3678 * * 3533 * 3560 2377 * * * * 4 0 * * * * * * 4455 0 0 R 5 * 3576 * 4000 * * * * 3901 * * * * 1518 1440 3857 * * * * 5 0 * * * * * * 4970 0 0 S 6 2583 * * * * * * 3206 3292 * * * * * 5996 860 * * * 4160 6 0 * * * * * * 5564 0 0 A 7 2639 * 5143 3390 * * * 4452 2811 3574 * * 2950 4447 4575 2408 * 4721 * * 7 0 * * * * * * 5826 0 0 N 8 4549 * 4925 4252 * 4686 4604 * 2695 4645 * 1887 * 4654 4667 2011 * * * * 8 0 * * * * * * 5892 0 0 A 9 3373 3257 4601 3045 4645 * * * 4558 4654 * * 3573 3598 2589 3223 5201 4402 * * 9 0 * * * * * * 5892 0 0 E 10 5201 * 5197 1355 * * * * 3804 4743 * * * 2228 4961 4831 3176 5371 * 5055 10 0 * * * * * * 6073 0 0 D 11 5152 * 1521 4703 * 3717 * 4508 3268 3874 * * 5201 2932 5091 * 4824 3837 * * 11 0 * * * * * * 6073 0 0 A 12 1120 * * 4436 5385 4929 * * 5455 * * * 5601 4039 5253 2452 4134 3908 * * 12 42 5137 * 0 * * * 6397 1000 0 Q 13 3723 5362 4063 3133 5215 4419 5368 * 3640 * * 4320 * 2225 * 2832 3328 4505 * * 13 0 * * * * * * 6472 0 0 E 14 3767 * 5174 2160 * * * 5552 3302 4354 5360 3964 2908 2861 4549 3754 7516 5504 * * 14 0 * * * * * * 6610 0 0 F 15 3947 * 5588 6067 2937 * 5797 4664 4414 2313 2108 * 4815 5428 * 5776 * 4804 5471 3382 15 0 * * * * * * 6664 0 0 S 16 4128 * 6157 4229 * * 6007 6141 * * 5979 5908 5406 4414 * 1731 1227 6119 * * 16 25 * 5875 * * * * 6793 0 0 D 17 6163 * 2276 1841 4969 5588 5685 4361 4033 5193 * 5037 2988 4848 5083 5215 6165 5083 * * 17 0 * * * * * 0 6836 0 1000 V 18 4539 * * 4360 4137 6085 * * 5810 1185 3341 4991 6311 4902 * 4464 3799 3765 * 6344 18 4 8662 * 3700 115 0 * 6835 1000 1000 E 19 * 6451 3835 638 * * * * 4160 4128 * 5853 5349 3050 * * * * * * 19 73 5151 5543 2634 253 * * 6937 1757 0 R 20 4690 * 4165 2318 6132 * 5428 * 2629 3781 5193 5485 5222 3087 2821 3540 6447 * * * 20 22 6061 * 2000 415 * 0 6984 1000 1487 A 21 2070 5048 3806 4539 5331 5191 6660 5397 5210 6633 * 4465 * 3074 6463 2228 3730 5052 * * 21 49 * 4912 * * 938 1065 6972 0 1487 I 22 6585 * * 6586 5477 * 6179 1177 4374 2886 3234 * * * 6544 * 5402 2618 * 6196 22 34 5432 * 2000 415 * 0 6961 1580 2446 E 23 3251 6541 3479 1629 5205 5501 5182 5471 4741 6844 4658 3948 * 3992 5885 5007 6363 3346 * * 23 19 6278 * 2322 322 1805 486 7051 1000 2446 T 24 4030 6300 3494 2407 5929 4596 6092 * 3641 4852 6136 4360 * 5240 4364 3564 2320 4691 * * 24 24 5907 * 2415 300 1394 691 7065 1805 2071 L 25 3804 6690 * * 6838 * * 2051 6127 1245 3762 * 6263 * * * 5226 3222 * 6383 25 38 * 5276 * * * 0 7102 0 1510 I 26 4969 * * 4351 4173 6478 * 2082 3413 3608 5745 * * 6230 2749 5888 4589 2629 5897 5465 26 14 6658 * 1585 585 2037 403 6988 1000 2211 K 27 3673 6358 2642 2796 5521 6611 5191 * 2553 5046 4619 4788 * 4061 4156 3433 4348 6560 * * 27 0 * * * * * 0 7024 0 1951 N 28 2766 6247 6375 5378 * * * 2336 5114 3379 5249 4736 5999 6572 6385 6367 3926 1870 6258 6139 28 0 * * * * 0 * 7024 0 1951 F 29 * 5422 * * 254 * * * * 5084 * * * * * * * * 5051 3676 29 12 * 6892 * * * * 7056 0 0 H 30 5004 6522 4398 4476 4488 5230 2082 * 3548 4786 5576 4178 * 3242 3475 4304 5389 6290 * 3691 30 18 * 6315 * * * 0 7057 0 1000 Q 31 4366 * 4792 3439 5342 * 6234 * 1460 5557 5328 4599 * 2619 3589 5096 5706 4637 * * 31 34 * 5426 * * 959 1042 7039 0 1571 Y 32 4421 6237 5898 5982 1758 * 4849 5706 * 4407 6842 6243 * * * 4540 * 6365 6477 1243 32 58 4673 * 1714 524 1415 678 7032 2296 2222 S 33 2261 6155 1265 6240 6125 5114 * 5240 6269 * * 6787 * * * 2450 5052 6430 * 4974 33 237 3243 4451 0 * 962 1039 7057 3367 1587 V 34 4368 6113 3025 4741 * 4147 6496 5297 1576 5316 * * * 6032 3209 5151 3715 3386 * * 34 123 4786 4463 0 * 2119 377 6982 2142 2861 E 35 * * 1443 2546 * * * 5865 3126 * * 2908 4597 5269 4297 6306 4861 5014 * * 35 211 5149 3212 0 * 632 1496 6943 2190 3524 G 36 * 4693 2795 3203 * 1203 6277 * 5119 5505 * 3238 6064 6498 4546 6475 * * * 5351 36 203 4807 3391 442 1922 122 3630 6949 2227 4259 G 37 * * 1856 * * 2118 5852 * 4114 * * 2070 5141 4956 3954 4903 * 6096 * 7115 37 395 5610 2192 642 1477 472 1841 6955 1688 3932 K 38 4372 4063 3680 5196 4782 4231 * 5679 1896 * 5823 4339 5625 4656 5197 2286 6027 * 4878 * 38 134 6300 3718 0 * 161 3239 6741 1000 5201 E 39 4592 5246 2658 3904 * 875 5242 * 5012 * * 4797 * * * 5211 * * * 4599 39 15 6616 * 0 * 0 * 6964 1000 3688 T 40 4615 6392 5131 5370 3445 * 5368 6435 2777 4693 5369 6697 * 3776 6476 3181 2040 4048 * 4309 40 0 * * * * * * 7042 0 0 L 41 * * * * * * * 1418 * 963 4214 * * * 6211 * * 4458 * * 41 0 * * * * * * 7042 0 0 T 42 * 5793 2242 4276 * 5063 * * 6712 6136 6325 4213 * 6082 6595 1401 2451 * * 6357 42 0 * * * * * * 7042 0 0 P 43 3310 6210 * 6473 5584 6697 6959 4467 1840 2938 6499 5135 3556 4590 4564 5867 4296 3726 * 5107 43 0 * * * * * * 7042 0 0 S 44 3787 * 2773 2898 * 5411 6710 5484 2734 * 6836 4192 4922 3522 5210 3037 3562 6654 6108 * 44 0 * * * * * * 7042 0 0 E 45 6271 * 3546 333 * 5525 * * * * * * * 4822 * 5455 6894 5695 * * 45 0 * * * * * * 7042 0 0 L 46 5695 * * 6136 1741 * * 4466 * 989 5329 * * * * 6468 * 3886 * 6108 46 0 * * * * * * 7042 0 0 R 47 6476 6597 6499 4160 5638 4223 * 5497 1536 3917 7368 * * 2717 2818 4748 4856 5329 6962 * 47 0 * * * * * * 7042 0 0 D 48 3646 * 4215 2731 * 4720 5743 * 2772 5179 6181 3690 6400 3150 3844 3518 3877 4494 * * 48 19 * 6275 * * * * 7042 0 0 L 49 3663 6669 * 6142 3762 3953 * 3634 * 1263 3413 * * * * 6218 * 2695 * * 49 52 6019 5640 1541 608 0 * 7011 1784 1579 V 50 5025 6060 * * 4825 * * 3237 * 1136 2425 * * * * * 6411 3111 * 4498 50 68 5661 5245 1825 479 * 0 7041 1640 2065 T 51 4829 6951 * 3580 6894 6263 5846 * 2317 4474 5782 4674 * 2807 2601 3903 3182 5296 * 5564 51 62 5568 5554 1214 814 2546 271 7026 1553 2982 Q 52 3992 * 3696 3089 6853 6612 * 5286 2360 5071 * 3800 * 3835 5509 2683 2898 5662 * * 52 227 5339 3048 1590 582 1226 805 6998 1773 3349 Q 53 6302 * 6277 1427 4925 4711 * 5275 5175 3264 4884 4309 6029 2460 5529 4628 6503 5685 * * 53 106 4430 5363 821 1205 1770 501 6966 2559 4390 L 54 4213 5368 * 5731 2579 3101 6153 4173 4388 2004 4631 * * * * 4490 4659 4290 * 3698 54 40 5187 * 1188 834 764 1282 7002 1928 4080 P 55 3801 4421 5955 5449 6405 3586 5773 4560 3718 2005 5650 6653 1945 5885 * 5405 6896 5431 * * 55 69 4755 6719 1736 515 240 2703 6951 2236 3214 H 56 4791 * 4015 4440 6342 2596 4450 6297 3011 * 6557 2325 4327 5067 4832 3950 3812 4840 * * 56 55 5843 5639 966 1035 1000 1000 7031 1766 1551 L 57 4804 * 4272 4019 2336 5630 4570 3093 4563 2882 4259 4525 5658 4381 5252 6412 4933 5887 5611 5394 57 76 4569 6760 1909 447 1418 676 7013 2621 2096 M 58 5251 * 5882 3916 * 4531 6654 3654 3377 2901 4102 3795 3296 3645 6564 4909 3012 4383 * * 58 101 3888 * 1578 588 1439 664 7050 3086 2055 P 59 5280 * 3354 4812 6348 4094 6918 4041 2366 3460 5196 5638 3440 3429 6293 3952 4571 4183 * 6746 59 147 3844 5207 2247 341 1000 1000 7023 3093 1620 S 60 4914 * 1846 4648 * 4394 4567 * 3281 5179 6774 3042 5856 5148 6488 3014 3210 * * 6715 60 68 4440 * 2014 410 1878 458 7000 3015 2532 N 61 4606 * 2930 2594 * 6653 5024 * 3198 5389 5935 3458 2438 3652 5127 6619 4524 5470 * 6344 61 74 5626 5070 1324 736 0 * 7010 1686 2093 C 62 3643 4378 2649 2386 6725 2884 5600 4935 3348 5028 4864 4837 5291 4697 4896 6005 * 6449 * * 62 105 4173 6081 1175 844 * 0 7003 2856 2199 G 63 2862 * 3330 2076 * 3933 * * 4481 5850 6724 5623 * 4263 5075 3823 3081 3883 6630 5647 63 106 5644 4291 2102 382 337 2262 7001 1564 2944 L 64 4406 5711 * 6591 6342 * * 2841 6000 1726 6845 * 6449 * * * 6699 1414 * 4364 64 14 * 6688 * * 264 2578 6991 0 3420 E 65 3943 * 1900 2381 6285 5045 6713 5738 2773 4650 * 3832 * 3742 4579 5635 6566 * * * 65 0 * * * * 1000 1000 7048 0 1686 E 66 3347 * 4712 1986 * * 4604 4519 2838 5286 6644 3717 * 3312 3240 6640 5709 5018 6899 * 66 13 6840 * 2000 415 0 * 7044 1000 1000 K 67 4853 5248 * 6913 5279 6556 6726 1771 4724 2187 2628 * * 5620 * * 5394 3458 4732 * 67 0 * * * * * * 7049 0 0 I 68 5561 * * * 2016 6658 * 2782 * 2169 1811 * * * 5850 6362 * 5580 * 5762 68 0 * * * * * * 7051 0 0 A 69 4013 * 4188 3543 5762 5360 6795 * 1660 * 6341 3534 * 2916 3471 3872 5319 6118 * * 69 0 * * * * * * 7051 0 0 N 70 3569 * 3286 2407 * 6003 5919 4955 3622 3956 4895 4160 * 3463 5716 3113 4360 4408 * 7980 70 35 6898 6028 2000 415 * * 7053 1000 0 L 71 3243 5821 * 5754 2989 6689 6723 3437 6725 1296 4453 6728 * * * 6403 6441 2995 * * 71 14 6729 * 2000 415 * 0 7040 1000 1000 G 72 * * 238 5828 * 4960 * * 5561 * 6324 3994 7329 * * * * * * * 72 0 * * * * * 0 7040 0 1000 S 73 3801 * 5603 4066 5708 5365 6672 3780 3116 3422 6045 5980 6366 3339 4363 3783 2805 3358 * 6713 73 0 * * * * * 0 7040 0 1000 C 74 * 5038 1128 6312 * * * * 5807 * * 1382 * 4436 6415 4649 * * * * 74 0 * * * * 0 * 7040 0 1000 N 75 4789 7158 6559 4397 6847 2305 3787 * 2191 6651 5571 3590 6740 3854 3120 5162 4040 * * * 75 0 * * * * * * 7053 0 0 D 76 * * 660 4708 * 4179 * * 6817 * * 2733 * * * 3575 5044 * * * 76 0 * * * * * * 7053 0 0 S 77 * 6548 5702 5554 * 661 6074 * 3639 * * 4447 * 3337 6802 4142 * * 6512 * 77 0 * * * * * * 7053 0 0 K 78 5510 * 6583 2577 4940 6344 5099 * 2345 * * 4186 * 2926 3531 5334 3033 3532 * 5469 78 0 * * * * * * 7053 0 0 L 79 * * * * * * * 1303 * 1865 4874 * * * * * * 1806 * * 79 0 * * * * * * 7053 0 0 E 80 * 6595 1114 3762 * 4319 6721 * * * * 3013 6028 * 5923 2772 3586 6817 * * 80 0 * * * * * * 7053 0 0 F 81 * 6627 * 6225 511 * * 4788 5682 4587 5943 * 7648 6975 * 6578 * 5816 5484 3356 81 0 * * * * * * 7053 0 0 R 82 5336 6341 3102 2254 6938 3907 4095 6045 5097 * 4919 3268 5297 2862 4256 4280 4515 * * 6414 82 0 * * * * * * 7053 0 0 S 83 5770 * 4294 272 * 5081 * * * * * 5297 * 5560 * 5902 6728 * * * 83 0 * * * * * * 7053 0 0 F 84 * * * * 365 * * 6025 * 4494 * * * * * * * 6472 * 2712 84 14 * 6687 * * * * 7041 0 0 W 85 5519 6888 * 6359 5335 * * 3448 4819 1917 2683 * * 6466 * 4662 6712 2429 3254 4865 85 39 5246 * 1966 427 * 0 6959 1864 1000 E 86 3803 6256 4534 3009 * * * 5395 2860 3719 6848 3747 5751 4139 3144 3518 3203 5153 * 6080 86 0 * * * * 0 * 6961 0 1000 L 87 4587 4712 * * 3640 4433 * 3728 6632 1390 2685 6560 * * * 5963 6278 3417 6366 5275 87 0 * * * * * * 6909 0 0 I 88 6554 6116 * * * * 6214 1638 * 2905 1771 * * * 6452 * 5760 2721 6314 5695 88 24 * 5947 * * * * 6860 0 0 G 89 3526 * 6168 4142 3746 1501 * 5268 4096 5596 4898 5422 * 3907 5041 3153 5279 5822 * * 89 0 * * * * 0 * 6752 0 1000 E 90 5221 * 4102 3114 * 3958 * 5089 1773 * 4701 6042 4401 5081 2889 3658 5654 * * 4365 90 45 5010 * 2609 258 * * 6724 1559 0 A 91 3739 * * * 5644 5567 * 3310 3199 999 5033 * * 5241 5863 5908 5826 5097 5755 5799 91 0 * * * * * * 6669 0 0 A 92 1186 * * 6159 * 5710 6090 3717 * 2534 4433 * * 4499 4732 5548 4634 3750 * * 92 0 * * * * * * 6634 0 0 K 93 4735 * * 5341 * 4570 * 5071 2162 4099 4143 5539 * 2343 2361 * 4774 3682 * * 93 50 * 4876 * * * * 6348 0 0 S 94 2032 * 3609 1692 * 5474 5194 * 4956 * * 4811 5152 4681 5115 3604 4401 5589 * * 94 44 * 5046 * * * 0 6298 0 1000 V 95 4738 4032 4414 5198 * 4636 * 2872 * 2651 4371 4845 * * * 4522 * 2217 * 2741 95 0 * * * * 0 * 6197 0 1660 K 96 * * 3794 3800 * * 3114 4871 2868 4517 * * * 3703 3685 2665 4794 * 3578 3414 96 0 * * * * * * 6133 0 0 L 97 4933 * 2916 3509 * * 3889 * 2153 2428 * * * * 2387 3685 * * * * 97 0 * * * * * * 6022 0 0 E 98 4764 * 4682 836 * * * * 3101 * * * * 2875 3168 * * * * * 98 0 * * * * * * 6011 0 0 R 99 4276 * 4517 4683 * 4226 4544 * 1896 3521 * * * 4265 1678 4347 * * * * 99 0 * * * * * * 5665 0 0 P 100 * * 2554 1641 * * 3176 * 3230 * * * 2406 4412 * * * * 4150 * 100 0 * * * * * * 5562 0 0 V 101 * * * 4010 * 2519 4154 2633 3924 2388 * 3160 * * 3334 * * 3679 * * 101 0 * * * * * * 5464 0 0 R 102 * * * 3980 * * * * 2586 * * * * * 377 * * * * * 102 0 * * * * * * 4902 0 0 G 103 1811 * * * 2739 1803 * * * * * * * * 2933 2760 * * * * 103 0 * * * * * * 3671 0 0 H 104 * * * * * * 332 * * * * 2281 * * * * * * * * 104 0 * * 0 * * * 3235 0 0 //