HHsearch 1.5 NAME c2lxtC_ FAM FILE c2lxtC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2lxtC_.a3m DATE Sat Jun 15 08:44:34 2013 LENG 33 match states, 33 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.5116 4.4379 SEQ >ss_dssp CCTTHHHHHHHHHTTCCCHHHHHHHHTTCCCCC >sa_dssp EEEDCEEDEEEECDEDEDEEEEEEEEEEEEEEE >ss_pred CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC >ss_conf 930246899999710508999965421588899 >Consensus xxvxdsxkrreilsrrpyrkilnxlssdxpgvp >c2lxtC_ DSVTDSQKRREILSRRPYRKILNDLSSDAPGVP >UniRef50_Q03060(119-152:361) cAMP-responsive element modulator n=72 Tax=Theria RepID=CREM_HUMAN E=5e-07 s/c=1.63 id=79% cov=103% EGVIDSHKRREILSRRPsYRKILNELSSDVPGVP # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 1000 1000 * * * * * * * * * * * * * * * * 1 0 * * * * * * 1134 0 0 S 2 * * * * * 1000 * * * * * * * * * 1000 * * * * 2 0 * * * * * * 1134 0 0 V 3 * * * * * * * * * * * * * * * * * 0 * * 3 0 * * * * * * 1134 0 0 T 4 * * * * * * * 1000 * * * * * * * * 1000 * * * 4 0 * * * * * * 1134 0 0 D 5 * * 0 * * * * * * * * * * * * * * * * * 5 0 * * * * * * 1134 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1134 0 0 Q 7 * * * * * * 1000 * * * * * * 1000 * * * * * * 7 0 * * * * * * 1134 0 0 K 8 * * * * * * * * 0 * * * * * * * * * * * 8 0 * * * * * * 1134 0 0 R 9 * * * * * * * * * * * * * * 0 * * * * * 9 0 * * * * * * 1134 0 0 R 10 * * * * * * * * * * * * * * 0 * * * * * 10 0 * * * * * * 1134 0 0 E 11 * * * 0 * * * * * * * * * * * * * * * * 11 0 * * * * * * 1134 0 0 I 12 * * * * * * * 0 * * * * * * * * * * * * 12 0 * * * * * * 1134 0 0 L 13 * * * * * * * * * 0 * * * * * * * * * * 13 0 * * * * * * 1134 0 0 S 14 * * * * * * * * * * * * * * * 0 * * * * 14 0 * * * * * * 1134 0 0 R 15 * * * * * * * * * * * * * * 0 * * * * * 15 0 * * * * * * 1134 0 0 R 16 * * * * * * * * * * * * * * 0 * * * * * 16 0 * * * * * * 1134 0 0 P 17 * * * * * * * * * * * * 0 * * * * * * * 17 1000 1000 * 0 * * * 1134 1000 0 Y 18 * * * * * * * * * * * * * * * * * * * 0 18 0 * * * * * * 1134 0 0 R 19 * * * * * * * * * * * * * * 0 * * * * * 19 0 * * * * * * 1134 0 0 K 20 * * * * * * * * 0 * * * * * * * * * * * 20 0 * * * * * * 1134 0 0 I 21 * * * * * * * 0 * * * * * * * * * * * * 21 0 * * * * * * 1134 0 0 L 22 * * * * * * * * * 0 * * * * * * * * * * 22 0 * * * * * * 1134 0 0 N 23 * * * * * * * * * * * 0 * * * * * * * * 23 0 * * * * * * 1134 0 0 D 24 * * 1000 1000 * * * * * * * * * * * * * * * * 24 0 * * * * * * 1134 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 1134 0 0 S 26 * * * * * * * * * * * * * * * 0 * * * * 26 0 * * * * * * 1134 0 0 S 27 * * * * * * * * * * * * * * * 0 * * * * 27 0 * * * * * * 1134 0 0 D 28 * * 0 * * * * * * * * * * * * * * * * * 28 0 * * * * * * 1134 0 0 A 29 1000 * * * * * * * * * * * * * * * * 1000 * * 29 0 * * * * * * 1134 0 0 P 30 * * * * * * * * * * * * 0 * * * * * * * 30 0 * * * * * * 1134 0 0 G 31 * * * * * 0 * * * * * * * * * * * * * * 31 0 * * * * * * 1134 0 0 V 32 * * * * * * * * * * * * * * * * * 0 * * 32 0 * * * * * * 1134 0 0 P 33 * * * * * * * * * * * * 0 * * * * * * * 33 0 * * 0 * * * 1134 0 0 //