HHsearch 1.5 NAME c2lvrA_ FAM FILE c2lvrA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2lvrA_.a3m DATE Sat Aug 4 13:35:31 2012 LENG 30 match states, 30 columns in multiple alignment FILT 113 out of 10736 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.5321 3.8365 SEQ >ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHSCC >sa_dssp EEDDDAEEDEEEDEEDDCCDEBEDEDDEEE >ss_pred CCCEECCCCCCEECCCCCCCEEEEEECCCC >ss_conf 984887558867513110746675407779 >Consensus vKpyxCxxCxkxFxxxxxLxxHxrxHTGEK >c2lvrA_ MKPYVCIHCQRQFADPGALQRHVRIHTGEK >UniRef50_Q5TU43(226-255:332) AGAP002918-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q5TU43_ANOGA E=2e-05 s/c=1.68 id=35% cov=103% LKVFACDFCDKRFVQSGNLKSHMRTHTAER >UniRef50_Q16RD0(725-756:839) Putative uncharacterized protein n=5 Tax=Culicini RepID=Q16RD0_AEDAE E=4e-05 s/c=1.53 id=35% cov=103% LRPFKCDEagCSKSFSRKEHLMRHIVSHTGKK >UniRef50_UPI00017605B1(402-426:462) PREDICTED: similar to zinc finger protein 819 n=1 Tax=Danio rerio RepID=UPI00017605B1 E=0.0004 s/c=1.84 id=35% cov=87% -KPYSCKVCGKSFTQACTARVHERVH---- >UniRef50_UPI000155BCE5(318-345:640) PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCE5 E=5e-05 s/c=1.74 id=34% cov=97% -KSFVCPDCGKTFRWRSHFVHHQRSHRGE- >UniRef50_Q8N680(361-387:514) Zinc finger and BTB domain-containing protein 2 n=26 Tax=Euteleostomi RepID=ZBTB2_HUMAN E=4e-05 s/c=1.82 id=36% cov=93% -RKYECTICGRKFIQKSHWREHMYIHTG-- >UniRef50_A9UX78(47-78:358) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX78_MONBE E=0.001 s/c=1.39 id=35% cov=103% VRPYECESCGKRYRQQYSLQRHQskMKHSGIK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1960 * 1947 4212 * * * * * * 1218 * * 1 0 * * * * * * 4393 0 0 K 2 * * * * * * * * 699 * * * * * 1381 * * * * * 2 0 * * * * * * 4980 0 0 P 3 4453 * 5859 6497 * * * * 4528 5550 6358 6717 550 5004 3969 6167 5090 6689 * 6850 3 15 6612 * 2000 415 * * 4985 1000 0 Y 4 * 6218 * * 1786 * 3012 * * 5804 * * * * * * * * * 850 4 0 * * * * * * 4975 0 0 V 5 3315 6658 * 2549 * 5825 5632 4803 2453 4452 4904 * 5277 3533 3303 5321 3832 3745 * * 5 0 * * * * * * 4975 0 0 C 6 * 0 * * * * * * * * * * * * * * * * * * 6 0 * * * * * * 4975 0 0 I 7 4323 * 3551 3058 * 3749 5203 6608 3057 * * 4029 3145 3466 5869 2430 4866 6508 * * 7 10 7160 * 1000 1000 * * 4975 1000 0 H 8 7113 * 4720 2522 3606 * 4049 2491 4959 3969 * 6718 * 3842 5640 5877 5344 3565 4809 3275 8 21 6147 * 1000 1000 * * 4975 1463 0 C 9 * 42 * * * * * * * * * * * * * * * * * 5136 9 0 * * * * * * 4975 0 0 Q 10 5440 5309 3021 3796 6963 1294 5014 * 4545 6693 * 4449 4015 5256 4735 4294 6722 7127 5781 * 10 0 * * * * * * 4975 0 0 R 11 4976 * * 5041 * * 6708 5804 922 6791 5682 * * 4986 2478 5356 * * 7071 3171 11 0 * * * * * * 4975 0 0 Q 12 2314 4650 6132 6410 * 3403 * 5621 4676 * * 6591 7218 6608 2393 2159 3080 5716 * * 12 0 * * * * * * 4975 0 0 F 13 6240 4423 * * 390 6661 * 5136 * 5963 * * * * * 5720 4393 6498 * 4477 13 0 * * * * * * 4975 0 0 A 14 2615 5899 * 6783 5941 5453 6271 5357 3518 4439 6819 3622 * * 3067 2116 2895 5872 * 6706 14 0 * * * * * * 4975 0 0 D 15 * 5186 4036 4752 5738 * 3915 * 4606 5305 6618 4769 * 2119 2552 4470 3554 6532 4199 3646 15 0 * * * * * * 4975 0 0 P 16 6042 * 5136 5917 5985 4954 5200 5804 2051 4072 5855 5074 4103 4247 2743 2332 5530 6925 * 6591 16 0 * * * * * * 4975 0 0 G 17 3715 5245 4262 4378 * 3175 4098 * * 5865 * 5360 5487 5647 5395 1593 3082 6660 5296 4807 17 0 * * * * * * 4975 0 0 A 18 3853 * 3123 5284 * 5242 2412 4830 5457 6342 6718 2513 6467 5494 5448 3108 3262 5944 * 5148 18 0 * * * * * * 4975 0 0 L 19 * 5482 * * 3819 * 6686 * 6621 460 4320 * * 6271 4991 * * 4896 * 4974 19 0 * * * * * * 4975 0 0 Q 20 4629 5908 * 5545 * * 5676 4047 2154 4340 5822 4342 * 2922 3145 4391 2722 4447 6596 * 20 0 * * * * * * 4975 0 0 R 21 4218 7032 6119 4357 * 6618 4887 3762 2904 5786 4941 6091 * 3598 1977 5029 3652 3715 * 4798 21 0 * * * * * * 4975 0 0 H 22 * * * * * * 37 * * * * * * 5284 * * * * * * 22 0 * * * * * * 4975 0 0 V 23 5657 * * 3072 * 6630 5571 3542 3926 3133 2306 * * 2379 4073 5825 5005 4015 * * 23 12 6967 * 1000 1000 * * 4975 1000 0 R 24 5993 * 6330 * * * * 5763 3013 4207 5262 5670 * 4993 704 6630 5936 5651 5821 5615 24 10 7204 * 0 * * * 4975 1000 0 I 25 6484 6240 * * 5732 5626 * 1545 4893 3796 5690 6649 * 5343 6746 4173 1974 3122 * * 25 0 * * * * * * 4975 0 0 H 26 * * * * * * 37 * * * * * * * 5307 * * * * * 26 0 * * * * * * 4975 0 0 T 27 5072 * 6661 * * 6530 * 5898 * 5766 6721 4837 * 5054 6700 2546 621 * * 6842 27 0 * * * * * * 4875 0 0 G 28 5694 * 6381 5408 * 332 * * 4992 * * 4343 * 6491 5768 6518 5770 6465 * * 28 0 * * * * * * 4874 0 0 E 29 * * 3771 439 * * 5742 4902 4712 * 6524 6589 * 4688 6691 * * 5712 * 6610 29 0 * * * * * * 4838 0 0 K 30 * * * * * * * * 567 * * * * * 1621 * * * * * 30 0 * * 0 * * * 4657 0 0 //