HHsearch 1.5 NAME c2lv5A_ FAM FILE c2lv5A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2lv5A_.a3m DATE Sat Jul 6 08:23:33 2013 LENG 108 match states, 108 columns in multiple alignment FILT 36 out of 40 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.0 EVD 0.4540 1.3275 SEQ >ss_dssp CCCCCCCSCHHHHHHTTCCCEECGGGGHHHHHTTCEEEECSSSCHHHHHHHHHTTCHHHHHHHHHHTSEEECCHHHHHHHHHHCSCEEEEECSSCEEEEC SCCSCCCC >sa_dssp EEEEEEEEEDCEEDAEEEDDEDCADEAEDDCEEDCABCADCECDADCAADABDEEDEEDCDECEEEDBACEBDEEBBDDAEEDCCEABAADAEEDAAABB EDCEEEEE >ss_pred CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCEEEEEE ECCCCCCC >ss_conf 9853234167999997312433778877998489789994888899999998125689999998549704789899999612980158897056078886 12457899 >Consensus xxxmxexxxxlxakLxxetaxixWxeLxxxfArGxvIxVxxxLDLieVaxaxaxDdxxxvxxWlxxgxixkxsxxqaxxWxxxxxxlwavVVxPwVLVQe raxxxxxx >c2lv5A_ GSHMTEQTSTLYAKLLGETAVISWAELQPFFARGALLQVDAALDLVEVAEALAGDDREKVAAWLSGGGLSKVGEDAAKDFLERDPTLWAVVVAPWVVIQE RAEKATLH >UniRef50_B9ZMZ9(13-101:104) Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ9_9GAMM E=5e-12 s/c=0.81 id=39% cov=82% --------------LEEEAGPLRWDELMPHFARGVVIRVAPELDLIEVARAFRDDATHQVSEWLANNQVARASDDDARRWAANDPVFTAIVAAPWVLAQE RS------ >UniRef50_Q21K40(11-116:116) Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21K40_SACD2 E=6e-25 s/c=1.08 id=37% cov=94% -------DEDIHVTLMKQTAIISWRELQRFFAAGKVIEVARGVDLVNVGLALVEDNAAAIKEWMDKEQVQIIPDTTAAQFVETDASVWALAVAPWVLVQQ -VEPAPKH >UniRef50_Q6SGP1(6-103:103) Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q6SGP1_9BACT E=3e-22 s/c=1.08 id=34% cov=90% -----DREALLRKEYHSQTARINWHDLQTYYAHGNAISVGSDLNLVEVAVQLGLDNTDQFQQWIADGQIASVHDDQALVWYEVNQELWAVVAPPWLLVQQ R------- >UniRef50_C7QWY6(2-100:103) Uncharacterized small conserved protein n=3 Tax=Cyanothece RepID=C7QWY6_CYAP0 E=1e-18 s/c=0.95 id=26% cov=92% --------EDLKTRLNQDLAEIEWKDLIPHAQRDAIIIVTKHLDILEVAVAIAQDNTDAVQHWISEALIDKPSSEQLTIWNADPSvVFKTLILQPFVLIQ LSVNSKP-- >UniRef50_Q7NIQ8(11-107:110) Glr2124 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NIQ8_GLOVI E=2e-11 s/c=0.73 id=31% cov=86% --------SELREQLQQMVDEAQWPDLTIHALNGRVIMVSRALKLVEVGEALVGDDTARFTVWLERGMLYKPTEAEIHERNRTAHRYEALIVRPFVLVHD -------- >UniRef50_A6DQP2(3-90:111) Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQP2_9BACT E=3e-10 s/c=0.75 id=28% cov=81% -------------KLLKEADWCEWSDLHDSFIRDMLFAVKEGKDCFLLAEAIAENNTEIVGKAIESGSIFRPDGFQVEKWKKDKLRFLTLIVSPFVVIQE -------- >UniRef50_C7RC07(24-116:119) CBS domain containing protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC07_KANKD E=2e-23 s/c=1.17 id=32% cov=85% --------EELIMKLNGETAIVAWKEIERFFAKGNLLLIEQGVDLINCAADLSLDNAQAIKPLIDSEKIQRMPIEFVKENCQPETEFWSVVVAPYVLAQ- -------- >UniRef50_A9FPN8(37-129:132) Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FPN8_SORC5 E=3e-21 s/c=1.10 id=31% cov=86% --------APMREQLAKTLGEVFWTDLRTHTARDAVIVVAADLDLLDVGEAMAANDTAAVEAWIAAGKLTKPTAADLARWpQQHDLRFLSLVVAPFVLIR Q-------- >UniRef50_B9M3D8(5-96:100) Putative uncharacterized protein n=3 Tax=Geobacter RepID=B9M3D8_GEOSF E=1e-18 s/c=1.02 id=23% cov=75% ----------------------EWGWLRVHLERDGLILISSDMDLAEAGWRIATDDTPVISGWIESGTVGKPSLAQIAKWDEDKgKQFQMLIVSPYILIQ DKA------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 S 2 * * * * * * * * * * * * * * * 0 * * * * 2 0 * * * * * * 1640 0 0 H 3 * * * 1433 * * 1673 * * * * * 1662 * * * * * * * 3 0 * * * * * * 1640 0 0 M 4 * * * * * * * * * 2904 424 * * 3045 * * * * * * 4 0 * * * * * * 2591 0 0 T 5 3227 * * 3127 * * * * * * * * * * 2945 * 885 3219 * * 5 0 * * * * * * 2704 0 0 E 6 * * 1944 800 * * * * * * * * * 3259 * 4031 * * * * 6 0 * * * * * * 3198 0 0 Q 7 * * * 1828 * * 4059 * 4017 * * 4085 4106 1514 3709 4238 * * * * 7 124 * 3602 * * * * 3247 0 0 T 8 * * 2141 3742 * * * * 4154 * * * 2191 4330 3182 3334 2605 * * * 8 0 * * * * * 0 3219 0 1000 S 9 2986 * * 1389 * * * * * 4417 * * 4787 5033 * 1546 * 4797 * * 9 0 * * * * * 0 3944 0 1000 T 10 * * 1971 2412 * * * 3964 * 3166 * * 3740 4657 * 3827 2665 4687 * * 10 0 * * * * * 0 3944 0 1000 L 11 * * * 4862 * * * 2695 * 599 4612 * 4971 * 3676 * * * * * 11 0 * * * * 0 * 3962 0 1000 Y 12 * * * 5273 * * 3457 3099 3521 5019 * * * * 1407 * 5055 * 4626 2317 12 0 * * * * * * 3970 0 0 A 13 927 * 5055 3043 * * * * 3222 * 4403 * * * * 5273 3210 4862 * * 13 0 * * * * * * 3970 0 0 K 14 * * 4964 3742 * * * * 923 3878 * * * 2779 3402 5348 4918 * * * 14 0 * * * * * * 4105 0 0 L 15 * * * * 3842 * * 4098 * 348 * * * * * * 5151 5392 * 4878 15 0 * * * * * * 4136 0 0 L 16 5154 * * 3943 4701 * 4878 * * 1900 4954 1372 * 3553 * 4708 * 5353 * * 16 0 * * * * * * 4136 0 0 G 17 4998 * * 2924 * 1933 5241 * 3093 2714 5428 * * 3122 4280 3482 * * * * 17 0 * * * * * * 4136 0 0 E 18 * * 3111 745 * * * * * * 4207 * * 2878 * 5010 3914 * * * 18 41 * 5151 * * * * 4136 0 0 T 19 3446 * * * 4974 * * 4683 * 3361 4949 * * * * 5135 680 4185 * * 19 0 * * * * * 0 4125 0 1000 A 20 573 * 2719 * * 2945 * * * * * * * * * 4438 * * * * 20 0 * * * * * 0 4125 0 1000 V 21 * * 3961 2386 * * * 3735 2899 * * * 3365 3710 2149 5509 4860 5501 4108 * 21 0 * * * * 0 * 4125 0 1000 I 22 3633 4136 * * * * * 935 * 3152 * * * * * 3851 * 2666 * * 22 0 * * * * * * 4136 0 0 S 23 3264 * 4281 1901 4320 4051 4473 * * * * 3511 3255 4309 4161 3391 5200 * * * 23 0 * * * * * * 4218 0 0 W 24 * * * * 5125 * * * * * * * * * * * * * 42 * 24 0 * * * * * * 4233 0 0 A 25 3570 5509 4913 4932 * 4958 2971 * 2382 * * 5077 3859 3344 2951 3302 4363 * * * 25 0 * * * * * * 4233 0 0 E 26 4992 * 1541 1086 * * * * * 5245 * * * 4843 * * * * 3431 * 26 0 * * * * * * 4233 0 0 L 27 * * * * * * * 2972 * 242 5209 * * * * * * * * * 27 0 * * * * * * 4233 0 0 Q 28 5160 * * 1909 * * 4231 3541 5077 5504 4913 * * 1747 2890 * 4357 * * * 28 0 * * * * * * 4233 0 0 P 29 5171 * 4231 * * 5245 * 4357 * * * * 1622 * 1480 * 2962 4958 * * 29 0 * * * * * * 4233 0 0 F 30 * * * * 1378 * 1120 * * * * * * * * 4231 * * * 3293 30 0 * * * * * * 4233 0 0 F 31 2378 * * * 949 * * * * 4094 * 5171 * * * * 4363 * 4992 3018 31 0 * * * * * * 4233 0 0 A 32 523 * * 3534 * * * 4231 * 4357 * * * 3113 * * * * * * 32 0 * * * * * * 4233 0 0 R 33 2857 * * * * 5504 4966 * 3154 * * 4357 * 4381 907 3933 * * * * 33 0 * * * * * * 4233 0 0 G 34 * * 1849 * * 469 * * * * * * * * * * * * * * 34 0 * * * * * * 4233 0 0 A 35 1505 * 4992 * * 4094 * * 3736 5504 4231 3348 * 3282 2928 5538 * 4229 * * 35 0 * * * * * * 4233 0 0 L 36 3669 * * * * * * 3573 * 1423 5375 * * * * * 5333 1267 * * 36 0 * * * * * * 4233 0 0 L 37 * * * * 4231 * * 613 * 3043 * * * * * * * 2544 * * 37 0 * * * * * * 4233 0 0 Q 38 3334 * * 5158 5317 5139 4843 5102 5634 2129 4357 * * 5593 3651 3611 5375 2693 3791 5333 38 0 * * * * * * 4233 0 0 V 39 * * * * * * * 2724 * * * * * * * * * 237 * * 39 0 * * * * * * 4233 0 0 D 40 1755 * 3233 3232 * 3904 5160 * 4231 * * 5077 * * * 1967 4120 * * * 40 0 * * * * * * 4233 0 0 A 41 2901 * 3284 3593 * 4340 5375 * 5102 4932 * * 1925 4115 2998 3336 * * * * 41 0 * * * * * * 4233 0 0 A 42 3353 * 2215 2176 * 2425 5102 * * * 5171 5531 * * * 2546 5077 * * * 42 0 * * * * * * 4233 0 0 L 43 5139 * * * * * * * 4231 452 4958 * * 5531 * * 4644 3415 * * 43 0 * * * * * * 4233 0 0 D 44 * * 313 5171 * * * * 4357 * * 3078 * * * * * * * * 44 0 * * * * * * 4233 0 0 L 45 * 4231 * * * * * 5102 * 168 5165 * * * * * * * * * 45 0 * * * * * * 4233 0 0 V 46 4060 * * * 4231 * * 1509 * 2416 * * * * * * * 1522 * * 46 0 * * * * * * 4233 0 0 E 47 3351 * 2707 1070 * * * * 5139 4231 * 3553 * 4162 * 5509 * 5171 * * 47 0 * * * * * * 4233 0 0 V 48 3353 4723 * * * * * * * 3657 * * * * * * 5390 394 * * 48 0 * * * * * * 4233 0 0 A 49 570 * * * * 1616 * * * * * * * * * * * * * * 49 0 * * * * * * 4233 0 0 E 50 2975 * * 1568 5538 5654 * 5139 * 3337 * * * 4614 4913 * 3644 2469 4958 * 50 0 * * * * * * 4233 0 0 A 51 937 * 4723 5139 * * * * * 5165 * * * 2821 2658 * * 3581 * * 51 0 * * * * * * 4233 0 0 L 52 * 5264 * * 2535 * * 1876 * 1898 2890 * * * * * * 2990 * * 52 0 * * * * * * 4233 0 0 A 53 752 * * * * 4966 5317 5375 * * * 5139 * * 4913 2655 * 3257 * * 53 0 * * * * * * 4233 0 0 G 54 3026 * 4236 1588 * 3114 * 5504 * 3840 * 4204 * 3598 4200 4932 4055 * * * 54 0 * * * * * * 4233 0 0 D 55 * * 312 * * * * * * * * 2364 * * * * * * * * 55 0 * * * * * * 4233 0 0 D 56 4913 * 1285 4236 * * * * * * * 1308 * 3877 4992 * * * * * 56 0 * * * * * * 4233 0 0 R 57 1624 * * * * 4992 * 4932 2357 * * * * 5531 5593 5245 1629 5377 * * 57 0 * * * * * * 4233 0 0 E 58 1467 * 4033 2563 * * 4913 * 3615 * * * 3040 3188 5209 4843 * * * * 58 0 * * * * * * 4233 0 0 K 59 1667 * * * * * * 3562 3971 4244 * * * 2094 3248 4932 3654 4958 * * 59 0 * * * * * * 4233 0 0 V 60 * * * * 2642 * * 1990 * 4262 * * * * * * * 900 * * 60 0 * * * * * * 4233 0 0 A 61 2302 * * 2381 * 3216 * * 3924 5538 * * * 2364 5317 3055 3821 * * * 61 0 * * * * * * 4233 0 0 A 62 2243 * 3995 3596 * 4958 3679 * 3150 5333 * 5377 4723 3295 3268 4207 5317 4357 * * 62 0 * * * * * * 4233 0 0 W 63 4231 * 5264 * * * * * * 4723 5165 * * * * * * * 226 * 63 0 * * * * * * 4233 0 0 L 64 * * * * * * * 1436 * 1337 2487 * * * 4153 * * * * * 64 0 * * * * * * 4233 0 0 S 65 2159 * 3018 1817 * 5377 * * 4516 * * 4226 * 4317 5209 2829 5077 * * * 65 0 * * * * * * 4233 0 0 G 66 3366 * 2415 2677 * 3440 * * 4243 * * 4033 * 5264 4357 2110 4423 * * * 66 0 * * * * * * 4233 0 0 G 67 5102 * * 3924 * 557 * * 4267 * * 4913 * 4003 5171 5317 5333 * * * 67 0 * * * * * * 4233 0 0 G 68 * * 4843 5390 * 5593 * 4992 2921 2038 4357 * * 1833 4437 3615 4958 * * 5375 68 0 * * * * * * 4233 0 0 L 69 * * * * 4843 * * 1922 * 1637 * * * * * * * 1397 * * 69 0 * * * * * * 4233 0 0 S 70 2299 5654 4213 3813 3615 2441 * * * * * 5317 * 3924 4264 3173 4363 4843 * 4357 70 0 * * * * * * 4233 0 0 K 71 5317 * * 4389 * 4251 * 5158 1272 4843 * * 4122 * 1697 4966 * * * * 71 37 5311 * 0 * * * 4233 1000 0 V 72 3637 * * * * * * 4148 * 3724 4063 * 1493 * * * 4343 1629 * * 72 0 * * * * * * 4233 0 0 G 73 4489 * 4231 4582 * 4480 4966 * * * 5390 * 2794 * * 1459 1989 * * * 73 0 * * * * * * 4233 0 0 E 74 2144 * 1560 3417 * 4231 * 4723 5160 4257 * 5077 4262 5377 * 5102 4843 * * * 74 0 * * * * * * 4233 0 0 D 75 2398 * 2208 1609 4231 5165 * * * * * * * 3176 * * 3751 * * * 75 0 * * * * * * 4233 0 0 A 76 5593 * 3704 2967 4723 * * 4843 * 3772 * * * 960 4614 * 3760 * * * 76 0 * * * * * * 4233 0 0 A 77 721 * * * * * * 3220 * 2583 * * * * * * * 3073 * * 77 0 * * * * * * 4233 0 0 K 78 2477 * * 3024 * 4190 4357 * 3579 3558 * * * 2954 2594 3778 4113 * * * 78 0 * * * * * * 4233 0 0 D 79 3420 * 2212 2549 * * 4843 3661 3549 * * 5654 * 4148 2633 * 5264 4966 5311 * 79 0 * * * * * * 4233 0 0 F 80 * * * * 3384 * * * * 3791 * 4723 5311 * 4357 * * * 474 * 80 74 4328 * 0 * * * 4233 1514 0 L 81 3230 4723 4958 * 4233 * 3815 * 4231 2855 * 2184 * 3644 * 3526 * 5158 * 3431 81 43 5077 * 0 * * * 4233 1000 0 E 82 2477 * 3779 1730 * * * * 4231 * * 5139 * 3127 4357 4086 3138 5125 * * 82 0 * * * * * * 4233 0 0 R 83 3806 * 2103 4361 * * 3434 * * * * 3923 4723 4219 2462 * 2682 4065 * * 83 0 * * * * * * 4233 0 0 D 84 3580 * 1317 3428 * * * * 3549 * * 3040 3627 4241 * 5390 4118 * * * 84 47 4958 * 0 * * * 4233 1000 0 P 85 2128 * 4270 * * 5125 4357 5654 3585 3296 * * 2356 2730 * 5102 4723 * * 5390 85 92 4015 * 0 * * * 4233 1407 0 T 86 5333 * 4149 2201 * * * * 4207 3668 5125 5377 * 3605 2297 4161 3161 4004 * * 86 0 * * * * * * 4233 0 0 L 87 * * * * 1434 * * 4992 * 1077 * * * * * * * 3726 * 4357 87 0 * * * * * * 4233 0 0 W 88 * * * 4357 4270 * * * 4090 3296 * 4932 * 4958 5245 * 4913 5160 770 * 88 77 4264 * 617 1523 * * 4233 1402 0 A 89 986 5375 * * * 4843 * * * * 4094 * * * * 2899 2037 * * * 89 41 5171 * 0 * * * 4233 1000 0 V 90 * * * * * * * 4913 * 1114 * * * * * * * 986 * * 90 0 * * * * * * 4233 0 0 V 91 5158 * * * * * * 1717 * * * * * * * * * 582 * * 91 0 * * * * * * 4233 0 0 V 92 3109 * * * * * * 3226 * 3662 * * * * * * * 518 * * 92 0 * * * * * * 4233 0 0 A 93 1517 * 5125 * * * * * 5264 * * * 3553 2801 3056 2237 4843 * * * 93 0 * * * * * * 4233 0 0 P 94 * * * * * * * * * * * * 0 * * * * * * * 94 0 * * * * * * 4233 0 0 W 95 * * * * 1519 * * * * * * * * * * * * * 999 2730 95 0 * * * * * * 4233 0 0 V 96 * * * * * * * 2867 * 4966 * * * * * * * 267 * * 96 0 * * * * * * 4233 0 0 V 97 * 5509 * * * * * * * 196 * * * * * * * 3246 * * 97 0 * * * * * * 4233 0 0 I 98 3815 * * * * * * 1413 * * * * * * * * * 853 * * 98 0 * * * * * * 4233 0 0 Q 99 * * * * * * 4299 * * * * * * 154 4306 * * * * * 99 0 * * * * * * 4216 0 0 E 100 * * 2048 1314 * * * * * 3811 * * * 2012 * * * 4766 * * 100 71 * 4388 * * * * 4090 0 0 R 101 4691 * * 3523 * * * 4162 2449 * * * * 4161 1081 4140 * 4320 * * 101 0 * * * * 0 * 3737 0 1000 A 102 1089 * * * * 4227 * * * * * * * 4056 * 1717 * 3155 * * 102 0 * * * * * * 3728 0 0 E 103 2360 * * 2042 * 2888 * * 3679 * * 3260 * 3539 * 2656 * * * * 103 0 * * * * * * 3332 0 0 K 104 * * 2246 2175 * * * * 2316 * * * 3037 * 3538 2653 * * * * 104 0 * * * * * * 3023 0 0 A 105 1068 * * * * 2183 * * 1724 * * * * * * * * * * * 105 0 * * * * * * 2258 0 0 T 106 * * * * * * * * * * * * 829 * * * 1194 * * * 106 0 * * * * * * 2258 0 0 L 107 * * * * * * * * 1429 670 * * * * * * * * * * 107 0 * * * * * * 1743 0 0 H 108 * * * * * * 0 * * * * * * * * * * * * * 108 0 * * 0 * * * 1743 0 0 //