HHsearch 1.5 NAME c2luwA_ FAM FILE c2luwA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2luwA_.a3m DATE Sat Jun 29 08:23:12 2013 LENG 101 match states, 101 columns in multiple alignment FILT 104 out of 204 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.4606 0.2686 SEQ >ss_dssp CCCCCSSSCBSSCCCCSSCCEEEEECCSSCCCCCCCCBSSSSCEEEEBCBSSCCCSSCCSBCCCCSSSSCCCCCCCCTTSCEEEEEEESSSCCCCBBCCC C >sa_dssp EEEDACEECBDEADADEDEDDEBCDDBEEEDECECDADEDECBABABBCDDEDADEEDDEBCCEEEBBEABCDEDBDDEDDBCABACBEDEDDDADACAB D >ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEE C >ss_conf 9612276276202523487078999958997699998188730479983588888663024640688733899858987089999996077564599998 9 >Consensus gxxLxxgxpxxxlsxxxgxxxxfxxxVpxgxxxxixxxggxGDaDLYvxxxxxptxxxydxxSxxxgnxExxxixxpxxGxyyVxvxgxxxxsxvsLxax y >c2luwA_ GNVLKNNTPVSNLTGNKGSEVFYTFTVDRNATAVVSISGGSGDADLYLKAGSKPTTSSWDCRPYRYGNNESCSVSAAPGTTYHVMIKGYSNYSGVTLKLQ Y >UniRef50_D2VXM1(147-250:1255) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VXM1_NAEGR E=7e-08 s/c=0.56 id=23% cov=96% ---LVDGQPQYS-QVERNGYSYFKVKVTGQLPTKLYISIGTqeGDSDLYVSGISQfPTSTDYDYASRSYGPDSvTIPVEENSPREYWIGVYGYfvdNKFT IVSCQAN- >UniRef50_A4CCW5(831-927:933) Collagenase n=4 Tax=Gammaproteobacteria RepID=A4CCW5_9GAMM E=8e-09 s/c=0.64 id=16% cov=86% GGQLEAGKVIC---LAQQEPMWFSIaDVNGHSTMSITSANGTGDLTLEYSNATWPNGVNHHGSSNNVGNSECITLNAQANYWGYLKVSGA---------- -- >UniRef50_Q8L1M7(935-1015:1094) Putative serine protease n=1 Tax=Dermatophilus congolensis RepID=Q8L1M7_9MICO E=1e-08 s/c=0.75 id=20% cov=73% -------------SISQGEKHTYKVAVPAGTSRLEISTGKPAdinsDLDIVVRDAS----GTEVGRAATSSAEETVTLTNPTAGTYTVEIDGYT------ ----- >UniRef50_D2VRM5(37-145:2351) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VRM5_NAEGR E=3e-06 s/c=0.49 id=18% cov=84% ------NQAQEGHVEAGNSVIYKFENIPElatdNSTLSFIVTTLSGDADIYVSTTGAPDftnPNTYQWKSVIQDGTDTVTLSKTTEGYksggpYYVAVNG FQ----------- >UniRef50_C9NU52(516-614:744) Cytochrome c551 peroxidase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NU52_9VIBR E=1e-09 s/c=0.65 id=21% cov=96% GETLQSGGKLTRDQGEciTGSMEHFYFDIqQDNTTVYLSSRDGQGDLKLYYHPTSWASKQNALAESIGEGTEQVLIITLNQ-GRHYVSAISQQGYQGVSI ---- >UniRef50_A3TZ88(5759-5858:12228) Cell wall associated biofilm protein n=2 Tax=cellular organisms RepID=A3TZ88_9RHOB E=5e-07 s/c=0.56 id=20% cov=83% ------GTPLTT-SLGLGKERLYRIVVPPEETLrvTLVSSDDTANNEIFLRHDALPSPNSFDATYEGPLSSDLVAVVPdTEPGVYYVSVRNYS------- ---- >UniRef50_Q56696(711-815:816) Microbial collagenase n=29 Tax=Vibrionales RepID=COLA_VIBPA E=5e-09 s/c=0.59 id=20% cov=83% --VLESGEAK---VLTVHQQRYAAVYVPEGVKEVrVWMSSqsnandpyGAGNVDLYASRKHWPTAEQHEYASNYAGSNEYLAIPVTEAGYVHFSLQA--- ---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 3547 0 0 N 2 * * 2020 3358 * 2937 * * * * * 1465 3819 * * * 3438 * * * 2 0 * * * * * * 4094 0 0 V 3 2055 * * 2917 * * * * * * * * * 4031 * 5129 4046 1069 * * 3 57 * 4686 * * * * 4681 0 0 L 4 * * * * * * * 4426 * 69 * * * * * * * * * * 4 0 * * * * 0 * 5671 0 1000 K 5 4026 * 5935 2286 5994 4823 * * 3657 4729 5808 6042 6066 2670 4423 4500 2540 3617 * * 5 42 * 5132 * * * * 5684 0 0 N 6 3169 * 2656 * * * * 4978 5258 4196 * 1563 5443 5991 5840 2322 * * * 5438 6 0 * * * * * 0 5648 0 1000 N 7 5958 * 3966 6398 * 518 * * 4865 * * 2620 * * * 6266 * * * * 7 0 * * * * * 0 5973 0 1000 T 8 5122 5120 * 3545 5327 5137 * 3854 3623 * * * * 3001 * 3680 3106 1581 * * 8 0 * * * * 0 * 5992 0 1000 P 9 2599 * * * * * * * 4634 * * * 909 * * 3338 3832 3658 * 6165 9 16 * 6530 * * * * 6025 0 0 V 10 6063 * * 6229 * * * 3132 4153 2272 4290 * * 2766 3400 5249 5582 1974 * * 10 26 * 5800 * * 0 * 6270 0 1000 S 11 * 3268 4571 2602 * 5455 * * * 5553 * 3526 5042 3953 * 3009 1812 * * 4200 11 268 * 2559 * * * 0 6218 0 1000 N 12 5185 4503 3605 5114 * 1623 * 6397 4409 6530 * 2050 6453 * 5244 4354 3781 5500 * * 12 184 * 3059 * * 1019 981 5929 0 4070 L 13 5998 * 4765 * 3435 * 5594 2867 * 779 * * * 5906 * 5868 * 3629 * * 13 0 * * * * 689 1397 5897 0 4162 T 14 3455 * 5551 5940 * 4866 * * * 5653 * 5491 * 3640 * 1146 3097 2887 * 6575 14 0 * * * * 1990 418 6269 0 2453 G 15 1833 * * 4742 * 1533 6413 4148 * 3533 * 5929 5922 * * 3770 * 3725 * * 15 12 * 6944 * * 0 * 6367 0 2088 N 16 2059 * 6526 3837 * 3398 * * 5086 4138 * 3690 4976 7222 4952 2545 3752 3753 6103 6002 16 44 6132 5972 1000 1000 * 0 6562 1000 1000 K 17 2186 * 4679 5537 6204 5429 6362 6775 3166 3747 * 5042 * 3212 4113 3094 2970 6173 * 5576 17 44 7442 5371 0 * 0 * 6660 1000 1685 G 18 6424 * 2515 * * 952 6198 * 6138 * 6135 2722 5162 5922 * 5386 * * * 4852 18 34 * 5408 * * 0 * 6760 0 1705 S 19 4411 * 3432 2425 * 3026 * 5633 5377 * * 4080 * 3392 4497 1949 5571 * 6356 5944 19 44 6590 5675 0 * 552 1653 6772 1000 2083 E 20 3710 * 4261 2563 6773 * 6853 5052 5059 * 5068 4136 4778 4324 4078 3739 4762 4147 2917 3452 20 12 * 6875 * * 1795 490 6766 0 1618 V 21 4035 * 4002 4752 6201 5409 3852 4467 3233 3964 4813 4121 * 3614 3744 2932 4581 4134 * 4704 21 8 7535 * 0 * 0 * 6769 1000 2040 F 22 * 4483 6546 4954 4139 * 3316 * 5864 3099 * 4693 * 5062 * 5316 3894 4116 4351 1499 22 46 4988 * 0 * * * 6787 1991 0 Y 23 5378 * * * 1215 5568 * * 6429 4753 * * * * * 5524 6589 * 5429 1251 23 14 6674 * 1585 585 * * 6814 1000 0 T 24 4671 * 5609 4641 4174 5287 * 5504 3099 6559 4901 6488 6548 4091 5142 2886 2578 3810 6436 2816 24 22 6058 * 1792 491 * * 6814 1521 0 F 25 6951 * * 6429 2298 * * 2340 6250 2592 4748 * * 6870 * * 6142 1809 * 4179 25 37 5313 * 0 * * * 6814 1505 0 T 26 5065 * 1894 3400 5487 * 5989 * 4715 7071 * 2962 * 5067 5204 4077 3080 3888 5922 3720 26 24 5933 * 842 1178 * * 6814 1585 0 V 27 3892 * 6780 6515 * * * 3476 * 3463 * * * 5962 * * 3693 647 * * 27 77 4263 * 1225 805 * * 6814 2731 0 D 28 4419 * 4439 4744 * 4335 * * 5746 6240 * 5220 719 4576 * 3884 4882 6548 * * 28 0 * * * * * * 6814 0 0 R 29 1506 * 3430 2895 * 4431 5422 5607 * * * 5256 3477 4702 4157 4494 5786 4393 * 6651 29 30 5616 * 2173 362 * * 6806 1640 0 N 30 4511 7169 4014 4793 * 1080 5333 5972 5636 6753 * 2399 6053 5076 5730 5376 6310 * * 5780 30 101 3887 * 660 1445 * * 6806 3372 0 A 31 1603 6053 4531 6341 * 5461 * 6252 3729 5752 * * * 5566 5544 2772 2167 4316 * 6875 31 43 5098 * 0 * * * 6806 2069 0 T 32 5027 * 4863 3651 * * * 6898 3653 4348 * 4857 4746 4057 4104 2456 1808 4704 * 5492 32 23 6005 * 0 * * * 6806 1472 0 A 33 4484 * 4458 3663 4887 6951 * 5458 4964 1738 5968 3053 6501 6569 3352 4372 5056 3321 * * 33 78 4252 * 901 1106 * * 6806 2948 0 V 34 5336 * * 5384 3934 * * 4316 4778 1562 4815 5613 * * 5376 4121 2299 4015 5976 4574 34 459 1876 * 80 4215 * * 6806 4826 0 V 35 5648 6664 6599 6771 2654 * 6553 1882 * 3290 5994 6547 * 6147 4778 5698 4751 1980 * 5590 35 16 6473 * 2322 322 * * 6820 1000 0 S 36 4477 * 6462 3699 6591 6280 5642 3389 4172 6559 6980 3713 * 5078 5498 2714 2484 2632 6289 5586 36 46 5000 * 768 1277 * * 6820 2251 0 I 37 5753 * 5423 5623 5695 * * 3027 6897 2621 3055 * * 5073 5727 2941 1987 3765 * * 37 20 6147 * 2000 415 * * 6820 1000 0 S 38 3449 * 4546 6197 6489 4681 * 3905 5401 4856 * 4342 6736 5194 4129 1702 2916 4647 5721 4839 38 21 6907 7415 0 * * * 6820 1000 0 G 39 5112 6656 5374 4869 * 989 3013 6547 5141 6326 * 4971 5638 4757 * 3222 5179 * * * 39 131 3529 * 1038 963 0 * 6828 3685 1000 G 40 5146 * 4840 6332 6624 624 6346 * 5470 4084 * 4540 5288 5392 * 4096 * * * 5587 40 114 3715 * 2613 258 * * 6820 3274 0 S 41 4329 * 3899 5006 * 4595 * * 5055 4894 * 3948 5067 5632 4990 1797 2165 6027 5347 4316 41 89 4068 * 1413 679 * * 6820 2907 0 G 42 3251 5999 6566 5473 * 359 * * * * * 5861 6357 * * 6425 5299 * * * 42 96 3956 * 1755 507 * * 6783 3391 0 D 43 * * 487 4685 * * * * * * * 2455 * 5300 6279 6341 6089 * * * 43 0 * * * * * * 6799 0 0 A 44 1202 * * * 4315 6007 * 4253 * 3065 * 6360 3634 * * 5313 5285 2441 * * 44 36 5327 * 1532 612 * * 6799 1651 0 D 45 5501 * 454 4569 * 6484 * * 5267 * 6341 3995 * * * 4008 4988 * * * 45 0 * * * * * * 6799 0 0 L 46 * * * * * * * 3166 * 434 3332 * * * * * * 4352 * * 46 16 * 6509 * * * * 6799 0 0 Y 47 * * * 5985 3215 * 5002 * * 5103 6318 6864 * * 5970 7040 * 4981 * 435 47 15 * 6609 * * * 0 6793 0 1000 L 48 4704 * * * 4882 4913 6533 4593 * 2809 5543 * * 6780 * * 6806 738 * 4044 48 115 4394 5115 2076 390 933 1070 6784 2539 1639 K 49 4021 * 6792 6460 5563 5002 5613 * 2459 * * 2655 * 5706 2536 1931 6110 * * 4785 49 41 5164 * 0 * 520 1725 6773 1747 2071 A 50 3717 * 3902 6318 2822 3666 4119 5975 4369 4665 * 4133 5776 3084 3211 4998 4972 6628 6721 3659 50 0 * * * * * 0 6793 0 1000 G 51 3942 6215 3611 4218 * 1366 6946 5628 5232 * * 2924 6274 4573 4958 4474 3885 6441 * * 51 0 * * * * 0 * 6793 0 1000 S 52 3067 * 4899 3805 * 3091 6416 5639 5255 * * 3336 * 3614 3627 2310 3419 5024 * 6291 52 69 7333 4634 1585 585 * * 6799 1000 0 K 53 3111 * 6826 3139 5937 * * 6716 4359 3334 * * 3290 3204 5143 5207 4829 3949 2170 * 53 65 4511 * 768 1277 * 0 6739 2274 2469 P 54 2366 * * * 5723 6136 * 6351 * 5453 * 5561 648 5333 6561 6012 * 5176 * * 54 21 6088 * 0 * * 0 6739 1000 2469 T 55 6791 * 3072 * 6296 4492 4617 * 5434 6281 * 3945 * * * 2154 1528 3506 6185 * 55 49 5523 6415 1308 746 1903 449 6739 1744 2469 T 56 2566 5407 4456 4864 6507 3852 5525 * 5048 3609 * * 3099 6914 4638 2995 2771 4919 * 4523 56 9 7294 * 2000 415 460 1874 6751 1000 2386 S 57 4270 * 3909 3714 5393 4345 * 5253 * 6601 * 3043 * 5016 5662 1606 3027 4626 * 4955 57 84 4838 5516 2348 315 * 0 6791 2167 1000 S 58 3613 * 2284 3918 6465 6413 6600 6512 5713 5478 * 2785 * 3968 * 2126 3868 4201 * * 58 13 6827 * 3170 170 * 0 6778 1000 2106 W 59 3209 * 5950 5006 2906 * 4534 * * * * 3576 * * 6827 6843 * 6107 5035 939 59 39 * 5227 * * * 0 6778 0 2106 D 60 6588 * 790 3556 * 6979 5824 4826 5912 5330 * 5545 * 3392 * 5920 3830 5614 * * 60 37 * 5320 * * 732 1329 6732 0 2788 C 61 3139 1412 5441 * 6259 3250 6212 5871 * 4883 6485 6752 * 4594 6000 6577 * 3958 4429 3233 61 0 * * * * * 0 6734 0 2441 R 62 2553 * * 5365 6471 4647 6547 6286 2750 6522 * * * 4871 1698 3201 4696 4175 * 5264 62 0 * * * * 969 1032 6734 0 2441 P 63 4841 * 6499 6524 * 6134 * * 6262 5430 * * 2356 6522 * 619 6959 * * 5190 63 55 5337 6267 936 1067 * 0 6760 1584 1677 Y 64 3073 * 4523 4240 2972 * 6412 4652 5138 6584 5646 3976 * 6929 4546 6943 2441 4759 5977 2415 64 14 6695 * 0 * 1374 703 6743 1000 2221 R 65 4629 * 4557 4467 * 3549 5139 5662 3379 4953 * 2676 * 4373 4380 2380 2990 5193 * 6394 65 56 4707 * 0 * 0 * 6760 2242 1677 Y 66 3106 * 3391 4523 6316 4208 * 6822 * 4534 * 3616 3164 4616 4935 2826 4523 3516 4632 4395 66 44 5043 * 0 * * * 6783 2121 0 G 67 6605 * 3378 6456 * 705 6805 * * 6353 * 5971 * 5141 * 3248 3529 6446 * * 67 19 * 6279 * * * * 6783 0 0 N 68 4240 * 5317 * * 4586 * * * 4968 * 1304 4635 5164 * 1913 3532 5424 * * 68 11 7006 * 0 * 0 * 6755 1000 1000 N 69 4954 * 2424 3135 * 5073 5988 6027 5721 5613 * 2021 5355 6523 6727 3117 3395 4992 * 4859 69 59 4635 * 0 * * * 6783 2613 0 E 70 5198 * 3807 381 * * * * 6335 6286 * 6575 * 4271 * 5037 * 5999 * * 70 29 5630 * 0 * * * 6783 1075 0 S 71 4140 4921 * 4830 4301 6568 * * 5529 3857 * * * 4319 5640 1818 2340 3052 * 4284 71 0 * * * * * * 6783 0 0 C 72 6087 1435 * * * * * 2034 * 3037 * * * * * * * 2004 * * 72 35 5999 6952 2322 322 * * 6783 1000 0 S 73 4254 * 5495 4140 * 4683 5469 4333 6151 4792 7224 4461 5137 4258 4987 2516 1728 4101 * 6955 73 15 6597 * 1585 585 0 * 6784 1000 1000 V 74 * * 6881 6423 2560 * 6286 1681 * 2583 6292 * * 5536 * 7028 6655 1953 * 6908 74 0 * * * * * * 6783 0 0 S 75 3392 * 2808 4145 * 5627 6277 4347 4670 6881 6370 3355 4177 5345 5422 2980 2394 4458 * * 75 89 4261 7052 1808 485 * * 6783 2815 0 A 76 2894 * 5282 4524 * 3349 * 6358 5546 4017 6688 1995 3332 6024 5976 3294 4097 4287 * * 76 49 6352 5552 0 * * 0 6784 1000 1000 A 77 3683 * 5998 4174 * * * 5978 6294 4559 7285 3745 961 4823 * 5964 3537 4382 * * 77 69 5379 5469 1428 671 1668 545 6790 1646 1914 P 78 2812 * 4657 2979 * 5244 * 5252 3566 4600 * 5179 3918 2583 4185 4155 3992 3675 * * 78 181 3700 4604 1460 652 0 * 6740 3172 2483 G 79 1794 * * 3563 * 3155 * 6772 6560 * * 3751 2719 7004 6382 3073 3722 4582 * 6291 79 0 * * * * 0 * 6740 0 2378 T 80 5222 * 6123 4696 * 334 * * * * * * * 4832 5630 6292 5154 * * 5034 80 15 * 6607 * * * * 6783 0 0 T 81 6234 * 3987 3838 * * * 5097 4227 5914 * 5282 6329 6332 3216 5423 1824 3531 2638 4524 81 48 4921 * 1092 914 0 * 6769 2289 1000 Y 82 5356 * * * 5461 5923 4135 5988 * 4199 * 4906 7405 6972 * * * 4331 2509 898 82 0 * * * * * * 6783 0 0 H 83 * * * * 3381 6133 3603 6481 6446 6456 * 4422 * * 4858 * 5050 * 4182 720 83 31 5567 * 0 * * * 6783 1470 0 V 84 4657 * * * 4323 * * 1368 * 4199 5981 * * * * * * 1143 * * 84 0 * * * * * * 6783 0 0 M 85 3184 6662 6822 4466 * 3346 * 5544 4538 3210 2603 5893 * * 4310 2337 4106 4139 6558 * 85 21 * 6079 * * * * 6783 0 0 I 86 4000 * * * * 6405 * 2991 * 2050 6855 * * * * 6652 6485 919 * * 86 0 * * * * * 0 6789 0 1080 K 87 3868 * 3434 3987 6949 6737 3561 5082 3409 * * 5029 * 3766 3114 3652 4376 4688 4829 2959 87 0 * * * * 0 * 6789 0 1080 G 88 2073 * * * * 916 * 6604 * * * 3705 5803 5265 * 3860 4943 * * * 88 80 * 4207 * * * * 6778 0 0 Y 89 3199 * 5176 4686 3014 5909 * * * * 5773 * 6791 5330 3784 6329 3793 4752 4447 1351 89 50 4876 * 1194 829 1917 444 6627 1736 2699 S 90 3470 * 3928 3711 5125 4069 4669 * 7008 4621 * 3705 4342 4031 4478 1754 4208 6795 * * 90 63 5560 5525 643 1475 0 * 6543 1614 2250 N 91 2765 * 3136 4136 * 2619 * * 5291 4719 * 3749 4491 4957 5839 2122 5240 4996 * * 91 22 * 6055 * * * 0 6494 0 1537 Y 92 4151 * * * 1567 6243 5131 6940 * * * 4905 3859 * 6278 3058 * 5716 * 1727 92 0 * * * * 0 * 6339 0 2152 S 93 3106 * 4180 3625 * 4373 * * 4797 * * 5728 6023 4585 6474 1300 2555 * * * 93 42 5970 6262 1000 1000 * * 6363 1000 0 G 94 4786 * 2742 5364 * 1124 * 5135 6522 * * 2898 * * * 2827 * * * 5888 94 30 5585 * 1585 585 0 * 6326 1000 1000 V 95 3551 * * * 6174 * * 5691 * 3458 6511 * * * * 6006 3778 771 * 3249 95 0 * * * * * * 6336 0 0 T 96 5494 6090 4626 6146 * 6621 * 4998 4686 * * 3872 * 4958 3757 1584 1706 6193 * * 96 25 * 5848 * * * * 6297 0 0 L 97 * 5079 * * 5155 * * 4559 * 414 4736 * * * * * * 3163 * * 97 0 * * * * 0 * 6215 0 1000 K 98 6009 * * 4761 * * 6371 6073 3252 3849 * * * 3168 4141 4274 1459 2761 * 6010 98 0 * * * * * * 6146 0 0 L 99 893 * * * * 3038 * 5596 * 4332 * * * * * 6312 * 2113 * 5284 99 0 * * * * * * 5887 0 0 Q 100 * * 2023 5447 * * * * 6428 * * 3062 * 5487 3096 1961 2742 5827 * 4777 100 0 * * * * * * 5801 0 0 Y 101 * * * * 2523 * 4736 * * * * * * * * * * * 4213 445 101 0 * * 0 * * * 4759 0 0 //