HHsearch 1.5 NAME c2ltjA_ FAM FILE c2ltjA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2ltjA_.a3m DATE Thu Jan 10 10:55:24 2013 LENG 111 match states, 111 columns in multiple alignment FILT 109 out of 379 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.0 EVD 0.4968 0.8844 SEQ >ss_dssp CCCCCCCSSSCCCCCCCCSSCCCCCSSSSCSSSSCEEEEEEEEECCCCCCEECTTSSSSCCCEEECCBCEEEEEEEEEEECSSCEECCEEECCCSSCCBC CEEEECCCSCC >sa_dssp EEEEEEEEEEEEEEEEEEEEDEEDEDEEDEEEEDBEEDDEEDEDDCEDEEEECEECEDEDEDEEDDBEDACDCBCBBCDEEEEDEDEEEEEBEECEECED CDBCDBCDEEE >ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEEEEEECCCC EEEEEECCCCC >ss_conf 9753122254331047835650678512135754378989986188328997588778708999878466499999999967821125742378865834 38894020269 >Consensus xxxxxxxxxxxxlvxxgxxxxxxxxxxxxxvxxxxxxvtxxexIpfxtxxxxdxxLxxGxxkVvqeGxxGxxxxtxxvxxxnGxxxxxxixxxvxxxpvx xIIxvGTkvtx >c2ltjA_ MGSSHHHHHSSGLVPRGSHMSLDENEVAANVETRPELITRTEEIPFEVIKKENPNLPAGQENIITAGVKGERTHYISVLTENGKTTETVLDSQVTKEVIN QVVEVGAPVTH >UniRef50_A4W4D6(1805-1903:1969) Type II secretory pathway, pullulanase PulA and related glycosidases n=31 Tax=Firmicutes RepID=A4W4D6_STRS2 E=8e-10 s/c=0.65 id=23% cov=75% -------------------------DTAPTAEEKPSLDfttkerTEETVLPIAEEVRYDATLAKGQSYVLQEGKAGKRVLVYQDVLVDGKVVATNLLSET VVDGEARIVVKGS---- >UniRef50_B1CBH2(316-415:556) Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBH2_9FIRM E=5e-12 s/c=0.72 id=19% cov=88% ----------SALNFREDEFSTDEISSKPSITiTTVKQVTYKKDVAYKTVYRDDPDVYVGTNKVKQEGKDGEKKVTAVNTYENGTVVKSDIkKETVTEKS TSKIISRGT---- >UniRef50_B0PGA4(118-222:341) Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA4_9FIRM E=3e-14 s/c=0.76 id=20% cov=92% -------YDGNDLLTPASEKPLERGDKIVLQRVDYEEYTVEKPIPYKTVRKNSPLISIGSTRRIQEGSDGVLMQTYVQRTVDGmKEDVQLLGERVEQQPV PETILIGSP--- >UniRef50_B0TB79(150-246:347) Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TB79_HELMI E=9e-14 s/c=0.80 id=23% cov=79% --------------------TVDKPSTVRVVRVTQEEVVEEQSVPFRTEQKPDNTLEKGLRKIVSRGRNGLERNKMLVTYEDGEpVKKDLIAQQIVRSPV NQVVAMGT---- >UniRef50_B2IMA1(1504-1595:1659) Endo-beta-N-acetylglucosaminidase, putative n=31 Tax=Streptococcus RepID=B2IMA1_STRPS E=2e-11 s/c=0.77 id=23% cov=84% --------------PQNKVLPKPTYQPASDQQKAPKLEVQEEKVAFHRQEHENTEMLVGEQRVIIQGRDGLLRHVFEV---DENGQRRLRSTEVIQEAIP EIVEIGTKV-- >UniRef50_A3PX52(357-457:547) Transglycosylase domain protein n=36 Tax=Bacteria RepID=A3PX52_MYCSJ E=3e-06 s/c=0.52 id=23% cov=68% ---------------------------------RVHKVSERLPLPAPLRRIHDPSINISRRVVDDPGKAGTQDVTFAVSTVNGRVTgRQVLARSIVTPAR PQVQRVGA---- >UniRef50_C7H367(137-238:358) Putative phosphatase-associated protein PapQ n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H367_9FIRM E=1e-05 s/c=0.50 id=23% cov=42% ----------------------------------------------------------GRATTLQHGAEGQQTVTTREKYVDGElENSMVVDVTTTVEPT DHVVK------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 G 2 * * * * * 0 * * * * * * * * * * * * * * 2 0 * * * * * * 1660 0 0 S 3 * * * * * * * * * * * * * * * 585 1585 * * * 3 0 * * * * * * 2224 0 0 S 4 * * * * * * * * * * * * * 575 * 1605 * * * * 4 0 * * * * * * 2224 0 0 H 5 * * * 1585 * * 1605 * * * * 1565 * * * * * * * * 5 0 * * * * * * 2224 0 0 H 6 * * * * * * 1605 1565 * * * * * * * * * 1585 * * 6 0 * * * * * * 2224 0 0 H 7 * * * * * 1585 1605 * * * * * * * * 1565 * * * * 7 0 * * * * * * 2224 0 0 H 8 * * * * * * 1010 * * * * * * * * * * * * 990 8 0 * * * * * * 2696 0 0 H 9 * * 990 1995 * * 2024 * * * * * * * * * * * * * 9 0 * * * * * * 2696 0 0 S 10 2320 * * * * 1267 * * * * * * * * * 1381 * * * * 10 0 * * * * * * 3048 0 0 S 11 * * * 2710 * * * * 2767 * * 1794 * * * 1280 * * * * 11 0 * * * * * * 3578 0 0 G 12 1755 * 1794 2767 * 1897 * * * * * * * * * * * * * * 12 0 * * * * * * 3578 0 0 L 13 3406 * * * * * * 2370 * 490 * * * * * * * * * * 13 0 * * * * * * 4267 0 0 V 14 * * * * * * * 2248 * 3821 * 3708 * * * * 3954 981 * 3818 14 0 * * * * * * 4733 0 0 P 15 * * * 2984 4067 * * * * * * * 1095 2078 * * 3199 * * * 15 0 * * * * * * 5184 0 0 R 16 4308 * * 3333 * 4394 * 4256 * 4222 * * 1990 4124 2199 3028 * 4398 * * 16 0 * * * * * * 5184 0 0 G 17 4542 * 2920 4666 4907 672 * * * * * 3532 * * * * * 4718 * * 17 0 * * * * * * 5487 0 0 S 18 3883 * 2965 2963 * * * * 2665 3381 4319 4825 * 3412 * 2521 4784 4943 * * 18 0 * * * * * * 5771 0 0 H 19 4987 * 4103 2182 * * 2117 * 5051 5131 * 4997 4434 4080 * 3542 * 2712 * 5282 19 0 * * * * * * 5861 0 0 M 20 3796 * * 4533 5157 * * 2846 3019 2012 3136 5190 * 5020 * * 3595 3448 * * 20 0 * * * * * * 5912 0 0 S 21 * * 5090 5147 4655 3540 * 3722 2478 5136 * 3890 3565 5199 * 2130 4453 4096 * 5554 21 0 * * * * * * 5946 0 0 L 22 4282 * 5384 5264 4804 * 5003 3638 5095 2400 * 5095 * * * 3972 3886 1554 * 4995 22 0 * * * * * * 5985 0 0 D 23 5264 * 2093 3334 * 4729 * 5430 3726 * * 4834 3245 5144 5415 2905 2726 5205 * * 23 40 * 5201 * * * * 5985 0 0 E 24 5496 * 3798 2002 * 3802 4787 5403 3708 * 4266 2877 4406 3758 5092 4719 5083 4567 * * 24 0 * * * * 0 * 6011 0 1000 N 25 3570 * 4035 4610 4623 1788 * 4304 4704 * * 3600 4432 5522 5311 4197 3412 4545 * 5175 25 0 * * * * * * 6073 0 0 E 26 5526 * 2664 2185 * 4140 * 4367 2795 4527 5758 * * 3049 5615 3812 3700 * * * 26 0 * * * * * * 6123 0 0 V 27 4465 * * 4311 * * * 4477 2978 4978 * * 3487 * * 2745 2732 1681 * * 27 0 * * * * * * 6123 0 0 A 28 2659 * * 4978 * * 4976 2528 4623 2633 * * 3979 5445 4468 * 5905 2311 * 4232 28 0 * * * * * * 6123 0 0 A 29 3121 * 5758 4719 * 4976 * 4051 5561 3062 * 4579 2986 5622 5455 2643 3207 3108 * * 29 34 * 5445 * * * * 6123 0 0 N 30 * * 4410 3191 * 3583 * 3087 4429 3087 * 3347 * * 4383 4584 2642 2942 * * 30 30 * 5611 * * 0 * 6093 0 1000 V 31 4015 * * 5600 5220 * * 3574 * 3828 * 5517 4830 3063 4928 5141 3445 1298 * * 31 65 5066 6139 1000 1000 0 * 6086 1000 1000 E 32 4596 * 3880 2494 5987 4627 * * 4550 4935 * 4903 5170 4140 1385 5830 5820 4460 * * 32 26 5820 * 0 * * 0 6176 1000 1000 T 33 4787 * 6366 2877 5646 * * 5870 4444 5305 4652 4993 5446 * 5201 5437 1965 1705 * * 33 25 * 5870 * * * 0 6216 0 1000 R 34 4731 * 4103 3597 * 4422 5292 5040 2259 4129 * 4709 * 5342 2402 5506 2891 4512 * * 34 83 4639 5974 3147 173 915 1091 6275 1756 1687 P 35 4310 * * 2781 * 5502 * 5546 3111 * * 5814 2053 5425 3782 4925 3124 3070 * 5417 35 0 * * * * 922 1082 6282 0 1586 E 36 4042 * 4506 2100 * * 5447 * 1692 * * * * 4907 4395 3074 3750 4929 * 5453 36 19 * 6268 * * * 0 6343 0 1000 L 37 5783 * 5155 4231 * * * 3442 5485 1755 6065 5433 * 4838 4196 4933 2392 2999 * 6153 37 0 * * * * 0 * 6421 0 1598 I 38 5020 * 4469 2743 * * 5558 2888 4761 4004 * * * 6166 * 3991 4440 1397 * 5927 38 61 6572 5029 2000 415 * * 6454 1000 0 T 39 3778 * 6737 4489 5526 * * 4658 5672 6041 6617 5241 * * 5625 3616 991 2988 * 6728 39 63 5143 6135 1510 624 953 1048 6496 1762 1691 R 40 * * * 1836 5839 * * 6783 2446 6662 6192 * * 3921 2963 4655 3998 2936 * 4084 40 18 * 6322 * * 952 1049 6495 0 1633 T 41 * * 4294 2219 * * * 6155 2945 * 6535 5459 * 3665 4494 3321 1908 3900 * * 41 46 4987 * 2448 292 952 1049 6540 1584 1671 E 42 6850 * 5163 1153 * * * 6067 3490 5128 * 6282 6280 2855 6570 5783 3486 3331 * * 42 43 5082 * 2222 348 0 * 6657 2066 1000 E 43 3837 * 3452 2036 * * * 6634 2796 5043 * * 3065 5656 6162 3366 3322 4054 * * 43 24 6680 7237 2585 263 * * 6965 1000 0 I 44 * * * * 7055 * * 1030 5381 2488 5355 * * 6860 * * 6072 2219 * 4718 44 11 7053 * 2000 415 * 0 6723 1000 1000 P 45 2882 * 3558 4960 * 6693 * * 5265 * * 4284 686 * * 6553 6156 * * 6144 45 18 * 6313 * * 0 * 6723 0 1000 F 46 4099 * * 5956 1283 * 5990 7255 5154 6069 * 6077 3547 * 6174 6504 7223 6635 * 1701 46 0 * * * * 0 * 6705 0 1000 E 47 4306 * 2929 2205 * 4374 5043 * 3087 * * 4048 3709 3016 4685 4216 4271 * * * 47 0 * * * * * * 6715 0 0 V 48 * * * 3599 * * * 3520 4674 6167 * 6506 4274 6076 5472 * 953 2639 * * 48 0 * * * * * * 6715 0 0 I 49 * * * 2166 * * * 2643 3622 6263 * 7330 * 3336 4028 5326 3646 1992 * * 49 0 * * * * * * 6715 0 0 K 50 6454 * * 2827 7014 * * 4122 4246 * * 6593 * 5418 2634 6263 2419 2962 * 2275 50 0 * * * * * * 6715 0 0 K 51 * * * 3128 * * 6365 2926 2080 6347 * * * 3108 2313 6276 4555 3198 * 6444 51 0 * * * * * * 6783 0 0 E 52 6191 * 4021 1860 5611 * 4844 4450 2962 5385 * 3752 4173 3901 5750 4239 3963 6178 * 4330 52 16 * 6472 * * * * 6783 0 0 N 53 * * 932 * * * * * * 6058 * 2202 * * * 2957 3439 5463 * * 53 0 * * * * 0 * 6781 0 1000 P 54 3056 * 2530 4776 * 6696 6200 6351 7149 * * 4260 1456 5486 * 2944 4552 7150 * 6810 54 0 * * * * * * 7066 0 0 N 55 5379 * 2839 2727 * 5953 * 6848 4355 5775 4833 2781 * 4852 4472 2510 2667 * * * 55 0 * * * * * * 7066 0 0 L 56 4651 * * 5478 6530 * * 4515 5454 647 2918 * * * 6559 6303 * 5099 7652 4959 56 11 * 7038 * * * * 7066 0 0 P 57 2760 * 3979 4127 3547 * * 5992 4550 3315 * 5037 2078 6006 6200 4821 6924 5884 5052 3319 57 0 * * * * * 0 6783 0 1000 A 58 3473 * * 2747 5335 6271 * 3447 2279 3913 * * 3659 5482 3325 4434 5307 3865 6581 7134 58 0 * * * * * 0 6783 0 1000 G 59 * * 4352 6285 * 279 * * * * * 5754 * 6191 * 4799 6363 6293 5558 * 59 15 6642 * 0 * 0 * 6805 1000 1000 Q 60 5066 * 3660 1848 6350 * 6391 5616 3344 5718 6319 * 6539 2867 4016 4228 3340 4589 * 4824 60 0 * * * * * * 7078 0 0 E 61 6028 * 5391 2214 * * * 5976 3625 6146 * 7054 * 3788 2793 2623 2468 4150 6544 * 61 15 6586 * 0 * * * 7078 1000 0 N 62 6619 * * 3538 * * 6650 4461 1694 6105 * 4029 * 3805 2302 4751 4748 3230 * 6933 62 0 * * * * * * 7078 0 0 I 63 * * * 4148 * * * 3068 * 4063 6619 * 5964 5472 6635 * 3537 753 * 5263 63 0 * * * * * * 7078 0 0 I 64 4568 * 4553 3383 * * * 4194 3187 2981 6509 * * 4614 4885 5518 4248 1442 * * 64 0 * * * * * * 7078 0 0 T 65 6619 * 6473 3842 * 6146 6412 6260 4308 * * 5058 * 1255 3275 3915 2826 4066 * * 65 0 * * * * * * 7078 0 0 A 66 3542 * 4600 1542 * * 4951 * 3363 6412 * 5724 3241 3222 5490 3304 * 4927 * * 66 0 * * * * * * 7078 0 0 G 67 4531 * * * * 128 * * * * * * 5279 * * 5976 * * * * 67 0 * * * * * * 7078 0 0 V 68 3927 * * 2783 * * 5526 6790 2012 * 6190 5823 * 2942 3355 4374 4633 2717 * 6597 68 0 * * * * * * 7078 0 0 K 69 3333 * 2708 4077 * * * * 3203 5052 * 2371 2470 5223 4692 5808 4429 4435 * * 69 0 * * * * * * 7078 0 0 G 70 * * * * * 0 * * * * * * * * * * * * * * 70 0 * * * * * * 7078 0 0 E 71 6828 * * 2349 4544 * 6840 4501 2864 2623 * * * 3849 5287 4005 3840 3583 * 3491 71 33 6319 6630 1000 1000 * * 7078 1000 0 R 72 4696 * * 3508 * * 6533 4591 1849 3632 5356 * * 3308 2329 6703 4941 3614 * 6083 72 15 6623 * 1000 1000 * 0 7068 1000 1000 T 73 4337 * 4622 2607 * * * 3964 4194 4493 4948 5432 * 3871 3451 4933 2445 2808 6949 * 73 0 * * * * * 0 7068 0 1000 H 74 4926 6347 4910 3213 6241 * 5716 2823 3727 5762 * 5306 * 3648 4523 6308 3607 1832 5497 * 74 0 * * * * * 0 7068 0 1000 Y 75 6119 * 6700 4184 4863 6083 * 4252 3750 4875 6243 5347 * 5137 4830 5221 1249 2910 * 5102 75 0 * * * * 0 * 7068 0 1000 I 76 3850 * 6350 5707 4322 * 6121 3616 5976 6828 6071 4983 6598 * 5066 5439 3313 3253 4272 1467 76 0 * * * * * * 7078 0 0 S 77 4646 * 5271 2845 * * * 5868 2540 4186 6424 5523 * 3417 2218 4539 3180 5022 6595 6101 77 19 6277 * 0 * * * 7078 1000 0 V 78 * * 5639 4042 * * * 2479 5150 3130 6619 4831 * 4364 5702 * 4060 1334 * 5167 78 43 7080 5509 0 * * * 7078 1000 0 L 79 * * 6916 4443 6318 6587 5508 3454 3542 4295 * 6972 * 6701 4104 5247 1836 2119 * 4049 79 51 4856 * 335 2270 * 0 7040 2601 1612 T 80 5394 * * 6242 5478 6916 * 4248 3655 3591 4332 5280 6972 * 4018 4089 2407 5422 5426 1845 80 31 5568 * 740 1317 * 0 7040 1684 1612 E 81 4450 * 3605 2758 6515 6631 5740 3337 3297 4627 6230 5285 * 4577 4680 3772 6565 2208 * 5426 81 44 5057 * 279 2508 962 1040 7040 2624 1612 N 82 6387 * 1861 5119 * 2108 6251 * 6270 * * 1333 * * * * 5746 * * 6626 82 15 6607 * 0 * 0 * 7073 1000 1000 G 83 * * 4071 4074 * 584 * * 4512 5882 * 4077 * 5069 5481 5968 6319 6222 * * 83 75 4299 * 0 * * * 7078 2781 0 K 84 6980 * 6954 2228 * 4630 7052 5121 1894 4098 * 5569 * 3268 4009 5858 4791 3069 7193 * 84 135 3488 * 0 * * * 6805 3822 0 T 85 6050 6432 5606 1770 * 5560 * 4508 3576 4828 6208 * 6697 5447 * 5390 4058 1534 * * 85 179 3099 * 128 3558 * * 6772 4043 0 T 86 4255 * 4036 3214 6798 5355 * 4063 4134 3985 * 5161 * 5054 * 2354 3108 2352 * * 86 102 3871 * 0 * * * 6772 3329 0 E 87 4400 * 4698 2757 * 4294 * * 2596 6334 * 5580 5787 4972 2369 2606 3929 5094 * 6184 87 46 4986 * 0 * * * 6767 2524 0 T 88 6292 * 5733 2785 * 5402 * * 2317 * 6946 4325 5686 3282 2976 3868 2458 4602 * * 88 10 7203 * 0 * * * 6564 1000 0 V 89 4630 * 5438 2882 * * 5244 4504 3405 2933 4670 5666 6102 5381 4456 5442 3938 1936 6324 * 89 100 4465 5531 0 * * * 6554 2582 0 L 90 * * 6553 5276 5702 * * 2246 3965 1821 6559 * 6168 6487 6300 6456 5192 1740 * * 90 34 6890 6055 0 * 934 1069 6543 1000 1608 D 91 4282 * 4210 3973 6294 4106 6646 3809 3457 3079 * 5955 * 4426 * 2166 3171 3778 * * 91 37 5297 * 352 2209 * 0 6518 2201 1587 S 92 4824 * 5938 2224 * * 6469 * 4242 * * 3426 6141 3647 4000 1729 3537 6918 6172 6522 92 82 4171 * 0 * * 0 6518 2762 1587 Q 93 * * 4456 1975 * * 6435 5141 2786 * * 4359 * 3649 3212 3944 2607 5089 6606 6619 93 0 * * * * 955 1047 6518 0 1587 V 94 * * 3628 4579 * * * 2198 5525 4703 5585 * * 5321 6657 3975 3686 1314 * * 94 23 5982 * 1064 939 0 * 6556 1090 1000 T 95 4653 * * 4920 6116 * * 2669 4665 3119 * * * 5663 4707 4900 1640 2601 * 5388 95 39 5215 * 0 * * * 6556 2194 0 K 96 4120 * 6123 3553 * * * 6384 1845 4901 * * * 3470 3528 3798 3172 4456 * 3135 96 28 6722 6709 0 * * * 6556 1000 0 E 97 3277 * 4880 1560 * * 6006 * 2900 6631 * 5110 2842 2884 4366 * 6421 * * * 97 12 6944 * 0 * 0 * 6552 1000 1000 V 98 2490 * * * * 6413 * * 5324 * 6059 * 716 * 6568 3586 4789 4994 * * 98 16 6524 * 0 * * * 6551 1000 0 I 99 * * * 4256 * * * 3144 3488 6416 * * * 3052 5597 4757 3147 1176 * * 99 0 * * * * * * 6551 0 0 N 100 5758 * 2171 4593 * 6018 * * 4372 * * 1783 2561 5690 5023 3950 3656 * * * 100 0 * * * * * * 6551 0 0 Q 101 3734 * * 2349 * 6105 5081 * 2418 * * * * 1848 2525 6579 4827 * * * 101 0 * * * * * * 6551 0 0 V 102 * * * 5895 * * * 1183 6228 4203 * * * * * * 5333 1151 * * 102 0 * * * * * * 6551 0 0 V 103 6105 * * 5654 * * * 1281 * 4335 5666 * * 6190 5584 * 4659 1284 * * 103 0 * * * * * * 6551 0 0 E 104 2691 * 6428 2183 * * 5795 6749 2404 3507 * * * 6288 3533 3557 * 3143 * 6416 104 0 * * * * * * 6551 0 0 V 105 6532 * * 4603 * * * 2341 3241 6376 * 6707 * 5297 3833 * 4721 1133 * 4883 105 0 * * * * * * 6533 0 0 G 106 * * * * * 0 * * * * * * * * * * * * * * 106 15 6550 * 1585 585 * * 6511 1000 0 A 107 4296 * * * * 5279 * * * 6369 6255 * 6310 * * 2830 536 4184 * * 107 0 * * * * * * 6293 0 0 P 108 3182 * * 4750 * * * * 885 3100 * * 3156 4635 4570 * * * * * 108 0 * * * * * * 5281 0 0 V 109 * * 4468 * * * * 3614 2729 4408 * 4909 * * * * 3063 937 * * 109 0 * * * * * * 5214 0 0 T 110 * * * * * * * * * 3445 * * 3002 * * * 352 * * * 110 0 * * * * * * 4227 0 0 H 111 * * * * * * 948 * * * * * * * * * * * * 1054 111 0 * * 0 * * * 2609 0 0 //