HHsearch 1.5 NAME c2lcrA_ FAM FILE c2lcrA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2lcrA_.a3m DATE Thu Jan 10 04:11:59 2013 LENG 97 match states, 97 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4721 1.0907 SEQ >ss_dssp CCCCGGGSSCEEEECSSSSSSSSEEEESSEEEEEECCTTSCCEEEEEECTTCCGGGTCCTTSSCEEEEECSTTGGGSCCCCTTSCCCCSSCCSCCCC >sa_dssp EEEEECDDDECCACADDCCCEDEECEABCAAABBCCDEEEECDCBCAAACEDEDBCECEECEDBBDDCBEDEECADDBBBCCCDEEEDEDDDDEBDE >ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCC >ss_conf 9766555866999954876488630531125788740888611002713457997267999631566157432275103663034788758666789 >Consensus xxxkpxxxxxvxCvCEgxxCxxxxCxGxxCfxslxxxxgxxvxqxkGCxxxyxexCxgpPxxxxxxxCCxxdlCNxnisxxlxxtxppxxxpxxdxx >c2lcrA_ DPVKPSRGPLVTCTCESPHCKGPTCRGAWCTVVLVREEGRHPQEHRGCGNLHRELCRGRPTEFVNHYCCDSHLCNHNVSLVLEATQPPSEQPGTDGQ >UniRef50_Q9CU19(1-41:189) Putative uncharacterized protein (Fragment) n=2 Tax=Theria RepID=Q9CU19_MOUSE E=4e-14 s/c=1.93 id=66% cov=42% ---------------------------------------------------------GRPTEFLNHHCCYRSFCNHNVSLMLEATQTPSEEPEVDAH >UniRef50_Q4RQK5(203-286:729) Chromosome 2 SCAF15004, whole genome shotgun sequence. (Fragment) n=2 Tax=Coelomata RepID=Q4RQK5_TETNG E=0.0005 s/c=0.54 id=31% cov=82% --IKPLKREEHECVCEGSSCaLGNRCMGHQCFSSLMVSAGALVYQ-KGCFKVYEQstmTCKTPPSRDQVVECCYGHLCNLNSSVEL-------------- - >UniRef50_UPI000155659A(17-107:436) PREDICTED: similar to serine-threonine kinase receptor type I, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155659A E=7e-28 s/c=1.36 id=45% cov=91% ----------VTCVCEGSHCLQSTCRGAWCLVAAVRPRDDPPYVTKNCGRsNYQETCLGFPKEVIALRCCHSHMCNQNISLDLPRTTtrlPCTPVPGDGG R >UniRef50_Q4RQK5(26-107:729) Chromosome 2 SCAF15004, whole genome shotgun sequence. (Fragment) n=2 Tax=Coelomata RepID=Q4RQK5_TETNG E=1e-20 s/c=1.23 id=38% cov=76% ----------VECVCEGASCsSGSWCLGQQCFTSLSVRNGTSVLQ-KGCIADSEEEstrCRRPPTPELVLECCYGDLCNLNASLQLPA------------ - >UniRef50_B2L5U2(3-55:265) Activin type I receptor 2 (Fragment) n=1 Tax=Xenopus muelleri RepID=B2L5U2_9PIPI E=2e-11 s/c=1.33 id=38% cov=22% -------------------------------------------------------------------CCQSDLCNLNITVKITILAP---------- >UniRef50_Q04771(25-108:509) Activin receptor type-1 n=72 Tax=Coelomata RepID=ACVR1_HUMAN E=1e-26 s/c=1.43 id=30% cov=81% ---KPKVNPkLYMCVCEGLSCgNEDHCEGQQCFSSLSINDGFHVYQ-KGCFQVYEQgkmTCKTPPSPGQAVECCQGDWCNRNITAQL------------- -- >UniRef50_Q4RQK5(116-197:729) Chromosome 2 SCAF15004, whole genome shotgun sequence. (Fragment) n=2 Tax=Coelomata RepID=Q4RQK5_TETNG E=8e-19 s/c=1.16 id=34% cov=70% ------------CVCEGATCEpDHRCAGQHCFSSLKMMDGAAVQQ-KGCLRDDEEgraTCATPPSPARVVKCCQGHLCNMNVTV---------------- - >UniRef50_A7RI35(36-132:553) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RI35_NEMVE E=0.0003 s/c=0.48 id=32% cov=48% ---------------------------------------------------YNMMCRGPRGKPNLHdtRCCTHDLCNKHINpTHAPSTIPPIKQEKLDVQ >UniRef50_UPI00017B1C29(29-110:507) UPI00017B1C29 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B1C29 E=3e-08 s/c=0.73 id=37% cov=62% ----------LLCTCENdkGTCLNQTCRGYVCFHSWFRD-----FEERGCLssRIYKEQCNG-AGPKFYIKCCSNDHCN--------------------- - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 0 * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 1000 0 0 V 3 * * * * * * * 1018 * * * * * * * * * 982 * * 3 0 * * * * * * 1597 0 0 K 4 * * * * * * * * 0 * * * * * * * * * * * 4 0 * * * * * * 1843 0 0 P 5 * * * * * * * * * * * * 0 * * * * * * * 5 0 * * * * * * 1843 0 0 S 6 * * * * * * * * 1699 1714 * * * * * 1369 * * * * 6 0 * * * * * * 1843 0 0 R 7 * * * * * * * * 1714 * * * * * 1369 * * 1699 * * 7 0 * * * * * * 1843 0 0 G 8 * * * * * 1369 * * * * * 1699 * * 1714 * * * * * 8 0 * * * * * * 1843 0 0 P 9 * * * 1714 * * * * * * * * 525 * * * * * * * 9 531 1699 * 0 * * * 1843 1000 0 L 10 * * * 1714 * * * * * 525 * * * * * * * * * * 10 0 * * * * * * 1843 0 0 V 11 * * * * * * 2781 * * 2438 * * * * * * * 948 * 2722 11 0 * * * * * * 2535 0 0 T 12 * * * 1736 * * * * * 2438 2722 * * * * * 1459 * * * 12 0 * * * * * * 2535 0 0 C 13 * 0 * * * * * * * * * * * * * * * * * * 13 0 * * * * * * 2583 0 0 T 14 * * * * * * * * * * * * * * * * 1603 576 * * 14 0 * * * * * * 2583 0 0 C 15 * 0 * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 2583 0 0 E 16 * * * 0 * * * * * * * * * * * * * * * * 16 0 * * * * * * 2583 0 0 S 17 * * * * * 576 * * * * * 2627 * * * 2579 * * * * 17 255 2627 * 1000 1000 * * 2583 1000 0 P 18 1961 * * * * 2627 * * * 3015 * * 2579 * * 1785 * * * * 18 0 * * * * * * 2583 0 0 H 19 * * * * * * 1565 * * * * * * * * 1410 1808 * * * 19 0 * * * * * * 2583 0 0 C 20 * 0 * * * * * * * * * * * * * * * * * * 20 681 1410 * 0 * * * 2583 1549 0 K 21 * * * 3015 * * * * 2579 1146 * 3015 * * * 2908 * * * * 21 190 3015 * 0 * * * 2583 1000 0 G 22 * * 3015 3015 * 1252 * * * * * 2627 * 2550 * * * * * * 22 0 * * * * * * 2583 0 0 P 23 * * 3015 * * * 3015 * * * * 3066 2579 2627 * 1718 * * * * 23 0 * * * * * * 2583 0 0 T 24 * * * * * * 3015 * * * * * * * 2040 * 1000 * 2908 * 24 0 * * * * * * 2583 0 0 C 25 * 0 * * * * * * * * * * * * * * * * * * 25 0 * * * * * * 2583 0 0 R 26 3015 * * 3015 * * * * * 2908 3066 * * * 1000 * * * * * 26 0 * * * * * * 2583 0 0 G 27 * * * * * 0 * * * * * * * * * * * * * * 27 0 * * * * * * 2583 0 0 A 28 1565 * * * * * 3066 * * * * * * 1393 * * * * * 2627 28 0 * * * * * * 2583 0 0 W 29 * * * * * * 3015 * * * * * * 1410 * * * 2627 1565 * 29 0 * * * * * * 2583 0 0 C 30 * 0 * * * * * * * * * * * * * * * * * * 30 0 * * * * * * 2583 0 0 T 31 * * * * 595 * * * * 2550 * * * * * * 2579 * * * 31 0 * * * * * * 2583 0 0 V 32 * * * * * * 2627 * * * * * * * * 1447 2908 1565 * * 32 0 * * * * * * 2583 0 0 V 33 2550 * * * * * * * * * * * * * * 595 * 2579 * * 33 0 * * * * * * 2583 0 0 L 34 2550 * * * * * * * * 583 * * * * * * * * 2627 * 34 0 * * * * * * 2583 0 0 V 35 * * * * 2627 * * * 3015 * 3066 * * * * 1960 * 1565 * * 35 0 * * * * * * 2583 0 0 R 36 * * * * * * * 3015 * * 3015 * * * 1000 * * 1985 * * 36 0 * * * * * * 2583 0 0 E 37 * * 2627 2579 * * * * * * 3015 3015 2550 * 2908 3066 * * * * 37 255 * 2627 * * * * 2583 0 0 E 38 2837 * 1723 2292 * * * * * * * 2691 * * 2336 * * * * * 38 0 * * * * * 0 2341 0 1000 G 39 * * 2336 * * 318 * * * * * * * * * * * * * * 39 0 * * * * * 0 2341 0 1000 R 40 1770 * 2336 * 2739 * * * * * * * * * 2292 * 2691 * * * 40 0 * * * * * 0 2341 0 1000 H 41 2706 * * * * * 1498 * * 2837 * * 2336 * * 2691 * * * * 41 0 * * * * * 0 2341 0 1000 P 42 * * * * * * * * * * * * 1314 * * * * 742 * * 42 0 * * * * 0 * 2341 0 1000 Q 43 * * * * 2627 * * * * 2908 * * * 1781 * * * * * 1273 43 0 * * * * * * 2583 0 0 E 44 * * * 1603 * * * * * * * * * 1000 * * * 2550 * * 44 1000 * 1000 * * * * 2583 0 0 H 45 * * * 1624 * * 1574 * * * * * * * * * 1557 * * * 45 0 * * * * 0 * 1841 0 1710 R 46 * * * * * * * * 576 * * * * * 1603 * * * * * 46 0 * * * * * * 2583 0 0 G 47 * * * * * 270 * * * * * 2550 * * * * * * * * 47 0 * * * * * * 2583 0 0 C 48 * 0 * * * * * * * * * * * * * * * * * * 48 0 * * * * * * 2583 0 0 G 49 * * * * 2040 1565 * 2908 * 1808 * * * * * * * * * * 49 255 2627 * 1000 1000 * * 2583 1000 0 N 50 2908 * * * * * * * 3066 * * 2579 * 3015 1132 * * * * * 50 270 2550 * 0 * * * 2583 1000 0 L 51 * * 1961 * * * * 2627 * 2579 * 2550 * * * * * 2040 * * 51 0 * * * * * * 2583 0 0 H 52 * * 3272 * * * 2803 * * * * * * * * 3118 * * * 649 52 0 * * * * * * 2792 0 0 R 53 * * * 1261 * * * * 2745 * * 2720 * 2852 2803 * * * * * 53 0 * * * * * * 2792 0 0 E 54 * * * 622 * * * * * * 2720 * * 2333 * * * * * * 54 519 1727 * 1585 585 * * 2792 1506 0 L 55 * * * 3118 * * * * * 2803 2720 * * 2745 * * 1183 * * * 55 177 3118 * 1585 585 * * 2792 1000 0 C 56 * 0 * * * * * * * * * * * * * * * * * * 56 0 * * * * * * 2792 0 0 R 57 3272 * * * * * * * 2333 2852 * 2745 * * 1285 * * * * * 57 0 * * * * * * 2792 0 0 G 58 * * * * * 663 * * * * * * * * 3386 * 1873 * * * 58 216 * 2848 * * * * 2890 0 0 R 59 * * * * 2877 * * * * * * * 662 * 2108 * * * * * 59 0 * * * * 0 * 2720 0 1000 P 60 2848 * * * * * * * * * * * 461 * 2891 * * * * * 60 0 * * * * * * 2890 0 0 T 61 * * * * * 1869 * * 2926 * * * * * * 1873 1636 * * * 61 0 * * * * * * 2890 0 0 E 62 * * * 1483 * * * * 2891 * * * 1265 * 3452 * * * * * 62 0 * * * * * * 2890 0 0 F 63 3501 * 3452 3386 2145 3423 * * 2848 * * * 2891 * * * * 2926 * * 63 0 * * * * * * 2890 0 0 V 64 * * * * 2848 * * 2926 * 2199 * 2891 * 2437 3501 * * 3266 * * 64 0 * * * * * * 2890 0 0 N 65 2153 * * * * * * * * 2891 * 2145 * * * * * 1860 * 2848 65 0 * * * * * * 2890 0 0 H 66 * * * * * * 1470 2848 * 2138 * * * * * * * 1873 * * 66 209 2891 * 1000 1000 * * 2890 1000 0 Y 67 * * * 1835 * * 3034 * 2138 * * * * * 1908 * * * * 3266 67 0 * * * * * * 2890 0 0 C 68 * 0 * * * * * * * * * * * * * * * * * * 68 0 * * * * * * 2905 0 0 C 69 * 0 * * * * * * * * * * * * * * * * * * 69 0 * * * * * * 2905 0 0 D 70 * * 3423 * * * 3085 * * * * * * 2129 * 3237 2647 * * 1763 70 0 * * * * * * 2905 0 0 S 71 * * * * * 1432 2647 * * * * 3237 * * 3195 1974 * * * * 71 0 * * * * * * 2905 0 0 H 72 * * 1000 * * * 1356 * * * * * * * * 3195 * * * * 72 0 * * * * * * 2905 0 0 L 73 * * * * 3195 * 3237 * * 813 3085 * * * * * * * 3358 * 73 0 * * * * * * 2905 0 0 C 74 * 0 * * * * * * * * * * * * * * * * * * 74 0 * * * * * * 2905 0 0 N 75 * * * * * * * * * * * 0 * * * * * * * * 75 0 * * * * * * 2905 0 0 H 76 * * * * * * 2157 * 2479 1890 3431 * * 3133 3059 * * * * * 76 0 * * * * * * 2238 0 0 N 77 * * * * * * 2479 * * * * 285 * * * * * * * * 77 0 * * * * * * 2238 0 0 V 78 3442 * * * * * * 1007 * * * * * * * 3418 * 1658 * * 78 0 * * * * * * 2238 0 0 S 79 * * * * * * * * * * * 2479 * * * 933 1752 * * * 79 285 2479 * 0 * * * 2238 1000 0 L 80 3059 * * * * * * * * 1217 * * * * * * 2479 1886 * * 80 0 * * * * * * 2238 0 0 V 81 * * 3054 3239 * * 2368 * 3071 * 2890 * * 2175 * * * 3258 * * 81 0 * * * * * * 2387 0 0 L 82 2368 * * * * * * 3071 * 541 * * * * * * * * * * 82 0 * * * * * * 2387 0 0 E 83 * * * 1766 * * * * * * * * 955 * * * 2396 * * * 83 0 * * * * * * 2340 0 0 A 84 1204 * * * * * * 2396 * * * * * * 2660 2200 * * * * 84 0 * * * * * * 2340 0 0 T 85 * * * * * * * * * 2124 * * * * * * 376 * * * 85 0 * * * * * * 2289 0 0 Q 86 2124 * * * * * * 2106 * * * * * 1481 * * 2473 * * * 86 287 2473 * 1585 585 * * 2289 1000 0 P 87 * * * * * * * * * * * * 329 * * * 2295 * * * 87 0 * * * * * * 2289 0 0 P 88 * 1907 * * * * * * * * * * 447 * * * * * * * 88 0 * * * * * * 2196 0 0 S 89 * * * * * * * 1717 * * * * * * * 1220 1907 * * * 89 0 * * * * * * 2196 0 0 E 90 * * * 1220 * * * * 1717 * * * 1907 * * * * * * * 90 0 * * * * * * 2196 0 0 Q 91 * * * 2100 * * * * * * * * * 1000 * * * 1907 * * 91 0 * * * * * * 2196 0 0 P 92 * * * 1717 * * * * * * * * 523 * * * * * * * 92 0 * * * * * * 2196 0 0 G 93 * * * 2100 * 1112 * * 1717 * * * * * * * * * * * 93 0 * * * * * * 2196 0 0 T 94 * * 1907 * * * * * * 1717 * * * * * * 2352 2100 * * 94 0 * * * * * * 2196 0 0 D 95 * * 447 * * 1907 * * * * * * * * * * * * * * 95 0 * * * * * * 2196 0 0 G 96 2100 * * * * 1112 * * * * * * * * * * * 1717 * * 96 0 * * * * * * 2196 0 0 Q 97 * * * * * * 2100 * * * * * * 1000 1907 * * * * * 97 0 * * 0 * * * 2196 0 0 //