HHsearch 1.5 NAME c2lccA_ FAM FILE c2lccA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2lccA_.a3m DATE Sat Feb 11 12:23:15 2012 LENG 76 match states, 76 columns in multiple alignment FILT 89 out of 93 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4231 0.0975 SEQ >ss_dssp CCCCCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECSSCSSCCCSSSCC >sa_dssp EEEEDDEEEDEBCADBCEEEDDDEBDACACCBDEEEEDDCBCACBEEEDEEEACCADDEDBDCDEEDEEDDEEEEE >ss_pred CCCCCEEECCEEEEEECCCCCCEEEECEEEEEEECCCCEEEEEEECCCCCCHHHCCCHHHEECCCCCCHHHHHCCC >ss_conf 9866442156699996598862453010565651488359999857876443320595553221512813553059 >Consensus xxxxxxxxgxkxxvxygxgkxxxlYEAKvixvexxxgexxYxVHyxGWnxxwDeWVxxxrilkxxexNlxkqKhxh >c2lccA_ EDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGLEHHHHHH >UniRef50_D0NHN8(3-66:194) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHN8_PHYIN E=3e-08 s/c=0.93 id=25% cov=67% -----------------------IYDAEVLKIETAGDASKFLVHFKGWSEGWDEWIAQENVLEDTPHNRERQK--- >UniRef50_Q12432(57-109:401) Chromatin modification-related protein EAF3 n=6 Tax=Saccharomyces cerevisiae RepID=EAF3_YEAST E=4e-06 s/c=0.99 id=43% cov=55% -------------------KPQKLGEDESIPEEIINGKC-FFIHYQGWKSSWDEWVGYDRI--------------- >UniRef50_B7FZE5(2095-2169:2344) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FZE5_PHATR E=3e-10 s/c=0.88 id=35% cov=61% -----------------------LWDASVIEVSTGSGDDLvrvidaYKVSYNGWSARFEDWVKPSRVIEPNENN-------- >UniRef50_Q8N5Y2(23-84:521) Male-specific lethal 3 homolog n=26 Tax=Tetrapoda RepID=MS3L1_HUMAN E=1e-11 s/c=1.14 id=30% cov=66% -------------------KARVLYDAKIVDVIVGKDEkgrkiPEYLIHFNGWNRSWDRWAAEDHVLRDTDEN-------- >UniRef50_Q7PY89(10-74:394) AGAP001795-PA n=2 Tax=Culicidae RepID=Q7PY89_ANOGA E=1e-13 s/c=1.19 id=33% cov=71% -----------------------LYEAKLLRcAMMKEKQVKYLVHYAGWNKNWDEWVPESRVLKYNEANRQRQQEVH >UniRef50_UPI00017B261B(489-548:1191) UPI00017B261B related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B261B E=5e-09 s/c=1.04 id=35% cov=67% ------------------GDEQESKENSGDDSSQEGEEGMKV------QVRYDEWIKADKIVRPANKNVPKIKH-- >UniRef50_A8Y075(18-76:303) Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae RepID=A8Y075_CAEBR E=7e-05 s/c=0.82 id=39% cov=47% ------------------GNHNEVYDAKITAISGKKGVEVYHVHFMGWNVRHD----------------------- >UniRef50_Q54RM0(3-73:379) NuA4 complex subunit EAF3 homolog n=1 Tax=Dictyostelium discoideum RepID=EAF3_DICDI E=1e-10 s/c=0.95 id=35% cov=64% ----------------------RIYEAKIIKVDPKtsksdKKKPLYFIHYLGWKEKWNEWIEPNKILKYTDKNRE------ >UniRef50_UPI0001793911(651-710:1807) PREDICTED: similar to AGAP007503-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793911 E=3e-13 s/c=1.27 id=40% cov=75% ----PVVVGDNLVVYYGD-KQATTYDAKVINVCDIEGVMKYYVHYKGWNSRYDEWIDVMRI--------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 1330 732 * * * * * * * * * * * * * * * * 1 0 * * * * * * 1545 0 0 D 2 * * 495 * * * * * * * * 1784 * * * * * * * * 2 0 * * * * * * 1775 0 0 M 3 * * * * * * * * * * 2234 * * * * 345 * * * * 3 0 * * * * * * 1775 0 0 E 4 1855 * 1784 1206 * * * * * * * * * * * * * * * * 4 0 * * * * * * 1775 0 0 P 5 * * * * * * 2711 * * * * * 600 * * * 2413 * * * 5 0 * * * * * * 2138 0 0 C 6 * 1898 * * * * * 2696 * * * * * * * 2064 * 2557 * 2571 6 0 * * * * * * 2163 0 0 L 7 * * * 2696 * * * * * 2114 * * * * * 2571 * 1789 * 2671 7 0 * * * * * * 2163 0 0 T 8 3063 * * * * * * * 2671 * * * * * * * 2115 1022 * * 8 246 2671 * 2322 322 * * 2163 1000 0 G 9 * * * * * 0 * * * * * * * * * * * * * * 9 0 * * * * * * 2404 0 0 T 10 * * 759 * * * * * * * 2914 * * * * 3441 2441 * * * 10 0 * * * * * * 2404 0 0 K 11 * * * * 3441 * * 3586 618 * * 3273 * * 3843 * * * * * 11 0 * * * * * * 2404 0 0 V 12 * * * * * * * * * 759 * * * * * * * 1290 * * 12 0 * * * * * * 2404 0 0 K 13 * * * * * * * * 880 3441 * * * 2914 2960 * * 3273 * * 13 0 * * * * * * 2404 0 0 V 14 * * * * * * * 3586 * * * * * * * * * 125 * * 14 0 * * * * * * 2404 0 0 K 15 * * * * * * * * 1443 * * 3536 * * 2914 * * * * 1275 15 0 * * * * * * 2404 0 0 Y 16 * * * * * * * * * * * * * * * * * * * 0 16 0 * * * * * * 2404 0 0 G 17 * * 3742 * * 229 3793 * * * * * * * * * * * * * 17 118 3668 * 0 * * * 2449 1000 0 R 18 * * 3760 3206 * * * 3677 1933 * * * 2582 3868 2045 * * * * * 18 227 * 2780 * * * * 2913 0 0 G 19 * * * * * 595 * * 4333 * * * * 4210 * 2956 3248 * * * 19 0 * * * * 0 * 2921 0 1433 K 20 * * 2655 4842 * * 3808 * 674 * * 4441 * * 4005 * * * * * 20 50 * 4887 * * * * 3506 0 0 T 21 2683 * * 2889 * * 4558 4557 3567 * * 4156 3404 4464 * 3029 2174 * * * 21 0 * * * * * 0 3613 0 1000 Q 22 4464 * * * 4459 * * * 2280 3076 * 3588 3748 1835 3726 5025 * * * 4625 22 112 5123 4450 2000 415 0 * 3613 1000 1000 K 23 * 4763 * 3406 * * * * 1516 * * * * 3640 3470 5395 4710 1803 * * 23 0 * * * * * 0 3585 0 1000 I 24 * * * * * * 5205 1903 * 1306 4581 * 5322 5828 * 4357 3944 3281 * * 24 47 4961 * 0 * 0 * 3882 1176 1000 Y 25 * * * * * 4867 * 5334 4398 5267 * * * * * * * * 4419 285 25 0 * * * * * * 3928 0 0 E 26 5764 * 2275 537 * 5919 5522 * * * * 5544 * * 5267 * * * * * 26 0 * * * * * * 3928 0 0 A 27 257 * 4867 * * 5267 * * * * * 4398 * * * 4166 * * * * 27 0 * * * * * * 3928 0 0 S 28 * * 5334 3168 * * 6208 * 503 * * 6324 * * * 3108 5953 * * * 28 0 * * * * * * 3928 0 0 I 29 * 2615 * * * 4398 * 1757 * 6110 * * * * * 4867 * 1169 * * 29 0 * * * * * * 3928 0 0 K 30 * * 4398 * * * * 1672 3967 1694 * * * 4732 5813 * 4048 2739 * * 30 0 * * * * * * 3928 0 0 S 31 4792 * 2191 2235 * * * 5954 1666 * * 4143 4867 * 3676 4964 * * * * 31 48 4930 * 0 * * * 3928 1350 0 T 32 3331 * 5334 4867 4976 6216 * 2349 * 4346 6411 * * * 5769 3571 3231 1669 5984 * 32 65 4499 * 993 1007 * * 3928 1513 0 E 33 5408 5936 2894 1498 * * * 4749 3181 * 6110 6633 * 6216 4535 2329 5762 5292 * * 33 95 4572 5544 1380 699 * * 3928 1535 0 I 34 5113 * 4361 5563 5852 5824 6144 2794 3070 5043 4595 6413 3675 3942 5821 * 3111 2234 * 5952 34 34 5439 * 670 1429 * 0 3906 1259 1000 D 35 5318 * 3475 2605 5766 3330 * 3662 2153 * * 3477 * 3542 5868 4251 5854 5850 5706 * 35 110 3772 * 1140 872 * 0 3906 1884 1000 D 36 6251 * 2297 3014 * 2524 * * 2509 * * 3917 * 5131 4009 3376 5016 * * 5267 36 36 5357 * 542 1675 * 0 3906 1317 1000 G 37 5562 * 2859 3976 * 1209 * * 2342 * * 5084 * 5484 4701 5988 4591 * * * 37 0 * * * * 0 * 3891 0 1000 E 38 4774 * 3387 1466 * 4616 6817 * 2709 * 6089 6235 5211 4702 5941 * 4198 2844 * * 38 124 3599 * 2837 218 * * 3917 1962 0 V 39 4538 6115 3964 4176 5127 3696 * 5790 * 6182 5596 * 2494 3540 * 5176 3452 2346 4728 4382 39 121 3919 6115 1719 522 * * 3577 2054 0 L 40 * 4369 * 2662 5408 * 4463 5179 2302 2719 3712 4890 * 4611 3408 4877 6293 4675 * 6461 40 101 3886 * 2519 277 0 * 3573 1421 1000 Y 41 * * * * 3651 * * * 5094 * * * * * * * * * 5890 194 41 0 * * * * * * 3217 0 0 L 42 * 6248 * * 2157 * 6113 5501 2976 1326 * * * * 4967 * 5370 5094 * 3123 42 43 * 5094 * * * * 3217 0 0 V 43 * * * * * * * 1288 * 4175 * * * * * * * 902 * * 43 0 * * * * * 0 3175 0 1000 H 44 * * * * * * 125 * * * * * * * 4437 4756 * * * * 44 0 * * * * * 0 3175 0 1000 Y 45 * * * * 1872 * * * * * * * * * * * * * * 461 45 0 * * * * * 0 3175 0 1000 Y 46 4443 5625 6855 * * * 6096 6185 1925 4328 6049 2962 4694 1765 5766 4806 4870 * * 5730 46 0 * * * * * 0 3175 0 1000 G 47 * * * * * 103 * * * * * 3860 * * * * * * * * 47 0 * * * * * 0 3175 0 1000 W 48 * * * * * 5018 * * * * * * * * * * * * 45 * 48 0 * * * * 0 * 3175 0 1000 N 49 5806 * * * * 6277 * * 2478 * * 774 * 5156 5456 2699 * * * * 49 0 * * * * * * 3219 0 0 V 50 3752 * * 3725 * * 4817 * 2322 * * 3925 4940 4870 5135 1589 4883 3519 * * 50 0 * * * * * * 3219 0 0 R 51 5788 * * * * 5796 5979 * 2854 * * 2922 * * 1573 2144 3114 * * * 51 0 * * * * * * 3219 0 0 Y 52 * * * * 3596 * 4367 * * * * * * * * * * * 552 2419 52 45 5022 * 0 * * * 3219 1000 0 D 53 * * 118 4271 * * * * * * * 5220 * * * * * * * * 53 12 * 6888 * * * * 3219 0 0 E 54 * * 3584 666 * * * * * * * 4441 * 5979 2237 * * * * 6341 54 0 * * * * 0 * 3202 0 1000 W 55 * 4353 * * 5927 * * * 4128 5820 * 5103 * * * * * * 291 6208 55 19 6254 * 1000 1000 * * 3202 1000 0 V 56 3724 * * * * * * 2030 * 5598 * * * * * * * 602 * * 56 0 * * * * * * 3201 0 0 K 57 3949 * 4418 4886 6249 3600 * * 2533 4588 * 5743 1867 * 3644 3489 3595 * * * 57 22 6023 * 2000 415 * * 3188 1000 0 A 58 3114 * 4534 1713 * 6524 4864 5740 4540 5281 * 6992 2529 3737 5581 4717 4749 4566 * 6740 58 0 * * * * * * 3177 0 0 D 59 5274 * 1556 2265 * 5233 5480 * 6480 * 6514 4100 6079 * * 2335 3930 * 5806 * 59 0 * * * * * * 3177 0 0 R 60 * 6148 * 6407 4387 * 4136 * 3772 * * 5015 * 5140 628 5890 * 5418 * 4327 60 0 * * * * * * 3177 0 0 I 61 6326 * * * 5724 * * 1262 * 2508 4166 * * * * * * 1643 * * 61 0 * * * * * * 3170 0 0 I 62 4897 * * * 5172 * * 3376 * 837 4127 * * * 3460 * * 2895 * * 62 0 * * * * * * 3356 0 0 W 63 6258 * * 1910 * * * * 953 * * * 5176 4680 3345 * * * 4679 * 63 0 * * * * * * 3297 0 0 P 64 5705 * 2447 5596 3707 * 4175 * 5275 3839 * 4199 2295 * * * * * 6231 1849 64 0 * * * * * * 3298 0 0 L 65 3938 * 6149 * * * * * * 4340 4604 1381 * * * 3151 1787 4510 * * 65 0 * * * * * * 3298 0 0 D 66 * * 1733 1205 * * * * 4103 * * 3468 4029 5677 * * 4795 * * * 66 0 * * * * * * 3298 0 0 K 67 3289 * 4214 1249 * 5567 5253 * 2364 * * 3278 * 6224 * 6515 4207 * * * 67 0 * * * * * * 3275 0 0 G 68 * * * * * 3099 * * * * * 219 * * * 5361 * * * * 68 0 * * * * * * 3275 0 0 L 69 * * * * 5662 * * 3357 4316 866 * * * * 3116 * * 2570 * * 69 0 * * * * * * 3019 0 0 E 70 4280 * * 1296 * * * 4905 3533 * * * 3057 2177 * * 5467 5595 4754 * 70 0 * * * * * * 2915 0 0 H 71 4815 * * * * * 4314 * 611 * * * * * 2258 * 4312 * * * 71 0 * * * * * * 3177 0 0 H 72 * * * * * * 3934 2917 * * * * * 428 * * * 4090 * * 72 63 4539 * 1585 585 * * 2978 1000 0 H 73 * * * * * * 3934 * 274 * * * * 4660 3878 * * * * * 73 0 * * * * * * 2978 0 0 H 74 * * * 2226 * * 347 * * * * * * * * * * * * * 74 0 * * * * * * 2231 0 0 H 75 * * * * * * 1057 * * * * * * * 1991 * * 1902 * * 75 0 * * * * * * 2013 0 0 H 76 * * * * * * 0 * * * * * * * * * * * * * 76 0 * * 0 * * * 1773 0 0 //