HHsearch 1.5
NAME  c2laqA_
FAM   
FILE  c2laqA_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c2laqA_.a3m 
DATE  Wed Jan  9 19:44:01 2013
LENG  31 match states, 31 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5100  3.7048 
SEQ
>ss_dssp
CCSCCCCCCCCCCCCCSCCSSCCCTTCSSCC
>sa_dssp
EEEEEEEEEEEEEEEEEECEEEDDEEDDEED
>ss_pred
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
>ss_conf
9777533254688810047631375444769
>Consensus
wewpwnrktkfxxxrdkwcrlnlgpawggrc
>c2laqA_
WEWPWNRKTKFISNRDKWCRLNLGPAWGGRC
>UniRef50_P05623(20-55:55) Accessory gland-specific peptide 70A n=9 Tax=melanogaster group RepID=A70A_DROME  E=2e-05 s/c=1.40 id=88% cov=103%
WEWPWNRKpTKFpipsPNPRDKWCRLNLGPAWGGRC
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
W 1    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	1
       0	*	*	*	*	*	*	1069	0	0	

E 2    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1069	0	0	

W 3    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	3
       0	*	*	*	*	*	*	1069	0	0	

P 4    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1069	0	0	

W 5    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	5
       0	*	*	*	*	*	*	1069	0	0	

N 6    *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1069	0	0	

R 7    *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	7
       0	*	*	*	*	*	*	1069	0	0	

K 8    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	8
       1000	1000	*	0	*	*	*	1069	1000	0	

T 9    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	9
       0	*	*	*	*	*	*	1069	0	0	

K 10   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1069	0	0	

F 11   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       1000	1000	*	2000	415	*	*	1069	1000	0	

I 12   *	*	*	*	*	*	*	1000	*	*	*	*	1000	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1069	0	0	

S 13   *	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	1000	*	*	*	*	13
       0	*	*	*	*	*	*	1069	0	0	

N 14   *	*	*	*	*	*	*	*	*	*	*	1000	1000	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1069	0	0	

R 15   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	15
       0	*	*	*	*	*	*	1069	0	0	

D 16   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1069	0	0	

K 17   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1069	0	0	

W 18   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	18
       0	*	*	*	*	*	*	1069	0	0	

C 19   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1069	0	0	

R 20   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	20
       0	*	*	*	*	*	*	1069	0	0	

L 21   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1069	0	0	

N 22   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1069	0	0	

L 23   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1069	0	0	

G 24   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1069	0	0	

P 25   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1069	0	0	

A 26   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1069	0	0	

W 27   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	27
       0	*	*	*	*	*	*	1069	0	0	

G 28   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1069	0	0	

G 29   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	29
       0	*	*	*	*	*	*	1069	0	0	

R 30   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	30
       0	*	*	*	*	*	*	1069	0	0	

C 31   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	31
       0	*	*	0	*	*	*	1069	0	0	

//