HHsearch 1.5 NAME c2l3aA_ FAM FILE c2l3aA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2l3aA_.a3m DATE Wed Jan 9 15:19:22 2013 LENG 82 match states, 82 columns in multiple alignment FILT 21 out of 25 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.9 EVD 0.3954 -0.5267 SEQ >ss_dssp CCCTTCCCEEEEEEEEEEEEETTTEEEEEEEEEESSSCEEEEEEEECSTTCCCCCCEEECHHHHHHHHHHHHSSSCSCSCCC >sa_dssp EEEEEDEEEEDDCDDEDDDDDEECCCDBBACBBCEDEDBDBACDCDBDEEEEEBECEDCCEEDBEECEEDDEEEEEEEEEEE >ss_pred CCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEECCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCC >ss_conf 9746542012246520136799970788889983788862441137844011013400079999999999984886674059 >Consensus xxxmaxxxyEIxxxigxLSxxxxGWxKELNxVsWnxxxpKyDIRxWxxdhxkMxKGiTLtxeExxxLkxxLxxilxxxxxxx >c2l3aA_ MKKMAEFTFEIEEHLLTLSENEKGWTKEINRVSFNGAPAKFDIRAWSPDHTKMGKGITLSNEEFQTMVDAFKGNLEHHHHHH >UniRef50_C9LLS6(12-86:91) Conserved domain protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLS6_9FIRM E=1e-18 s/c=1.25 id=40% cov=91% VKVMPtKITVTIEDELGDLSVAANGWKKQLTYTSWNGRDPKFDLRSWSVDHKSMTKGLTLTKEEMIKLKEILNGI-------- >UniRef50_A8RPS3(1-70:72) Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPS3_9CLOT E=2e-16 s/c=1.24 id=37% cov=87% ---MPDLKYNIIQTLAVLPAVGK-WHKELNLIEWGDRKAKYDIRGWNKDRSEMTKGITLSKEEMEYLKESIGGI-------- >UniRef50_B0S178(1-73:79) Putative uncharacterized protein n=2 Tax=Finegoldia magna RepID=B0S178_FINM2 E=8e-16 s/c=1.16 id=43% cov=79% ---MADLKFEIVERIGVLSTKANNWNKELNIVKWSDYDAKYDIREWNPDHTRMSKGLTFTEDELRVL--------------- >UniRef50_A8RWM2(15-78:83) Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWM2_9CLOT E=2e-13 s/c=1.20 id=33% cov=78% --------YEIYKHIGNLSPLNNGWIKELNLISWDNKEPVYDIRTWNSEHTEYGKGVTITAGQMVVLKNLL----------- >UniRef50_C7U181(6-72:77) Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=C7U181_9BACT E=3e-09 s/c=0.94 id=43% cov=79% ------FNYEIVEKVAVLSQSGDT-TKELNRVSYNGSTAKYDLRSWrrTDGEEKLLKGLTLTDEEARALKEAL----------- >UniRef50_A7VZ08(3-65:73) Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ08_9CLOT E=4e-07 s/c=0.89 id=38% cov=78% -------NYEIVKKIAVLGGKPDGVTKEINIVKWGVNDPAIDIRRWQGDIA--SKGISLKREEAQKLLEALK---------- >UniRef50_C5R9D3(1-76:105) Putative uncharacterized protein n=2 Tax=Bacteria RepID=C5R9D3_WEIPA E=1e-22 s/c=1.41 id=42% cov=94% ---MAKLSYDILEKFGTLSTSKSGWELQLNFVQWGENKPKFDIRSWSPDNSKMGKGLTLSHDEVVALYDVLANVLAAEH--- >UniRef50_C0WCD9(10-83:90) Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCD9_9FIRM E=3e-22 s/c=1.42 id=45% cov=91% ----SDFSFAIKRHIGVLSTTPRGWTKELNLVSYNGGRSKLDIRLWSEDHQKMGKGITLVREEADILYALLTNMRDKE---- >UniRef50_C3WGZ4(5-75:81) Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C3WGZ4_9FUSO E=6e-16 s/c=1.20 id=39% cov=88% -----ELKFEVLNDLGTISESTKGWSKKLTCIIWNEDEPKYDIRAWDSEFKKMGKEITLTEKELRSLKYLIDKELE------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 1000 * * * * * * 1000 * * 1 0 * * * * * * 1510 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 1510 0 0 K 3 * * * * * * * * 596 * * * * * * * * 1563 * * 3 0 * * * * * * 1793 0 0 M 4 * * * * * * * * 3325 * 152 * * * * * * * * * 4 0 * * * * * * 2499 0 0 A 5 761 * * * * * * * * * * * 2007 * * 2634 * * * * 5 122 3628 * 0 * * * 2646 1000 0 E 6 * * 1425 1217 * * * * 2970 * * * * * * * * 3842 * * 6 0 * * * * * * 2822 0 0 F 7 * * * * 1385 * * 2032 * 1621 * * * * * * * 4401 * * 7 0 * * * * * * 2920 0 0 T 8 * * * * * * 4046 * 1823 * * 2056 * * * 2684 1940 * * * 8 0 * * * * * * 3034 0 0 F 9 * 4274 * * 1398 * * * * * * 4453 * * * * * 4328 * 1079 9 0 * * * * * * 3099 0 0 E 10 4363 * 4290 400 * * * * 4453 * * 4408 * * * * 4328 * * * 10 0 * * * * * * 3099 0 0 I 11 * * * * * * * 276 * * * * * * * * * 2523 * * 11 0 * * * * * * 3099 0 0 E 12 4369 * * 2642 4330 * * 4408 3230 2630 * * * * * * 3525 1838 * 4059 12 0 * * * * * * 3099 0 0 E 13 4109 * 3349 1574 * * * * 1996 * * 4090 * 3430 3239 * * * * * 13 0 * * * * * * 3099 0 0 H 14 * * 4090 2918 * * 1619 * 2092 * * 4125 * * 4540 * 3339 4330 * * 14 0 * * * * * * 3099 0 0 L 15 * * * * 4290 * * 1436 * 1450 * * * * * * * 3350 4125 4109 15 0 * * * * * * 3099 0 0 L 16 2563 * * * * 587 * 4274 4746 3713 * * * * * * * * * * 16 0 * * * * * * 3099 0 0 T 17 * * 4328 3361 * * * 4746 * * * 4059 * * * 4873 1692 1280 * * 17 0 * * * * * * 3099 0 0 L 18 * * * * 4274 * * 2348 * 411 * * * * * * * * * * 18 0 * * * * * * 3099 0 0 S 19 * * * * * 3844 * * * * * * 3339 * * 322 * * * 4979 19 0 * * * * * * 3099 0 0 E 20 4408 * * 1656 * 3043 * * 4109 * * * 4059 4253 * * 1766 4328 * * 20 0 * * * * * * 3099 0 0 N 21 4328 * 4330 4274 * * * * 3151 4059 * 3240 * * * 1332 3408 4408 * 4979 21 0 * * * * * * 3099 0 0 E 22 2472 * 4970 4495 * 2262 * * 2856 * * 3243 2334 * * 4873 4090 * * * 22 0 * * * * * * 3099 0 0 K 23 * * 2541 * * * * * 1384 * * 2048 * * 4363 3370 4109 * * * 23 150 * 3339 * * * * 3099 0 0 G 24 * * * * * 166 * * * * * 4310 * * * * 4107 * * * 24 86 * 4107 * * 0 * 2965 0 1317 W 25 * * * * * * * * * * * * * * * * * 3771 280 3274 25 0 * * * * 0 * 3055 0 1000 T 26 * * * 4290 * * 3339 4059 2224 * * 4540 * * * 3107 1262 * * * 26 0 * * * * * * 3099 0 0 K 27 * * * * * * * * 166 3205 * * * * * * * * * * 27 0 * * * * * * 3099 0 0 E 28 * * * 339 * * * * 4090 * * * * 2731 * * * * * * 28 0 * * * * * * 3099 0 0 I 29 * * * * * * * 3133 * 359 * * * * * * * 3233 * * 29 0 * * * * * * 3099 0 0 N 30 * * * * * * * * 4125 * * 350 * * * * 2660 * * * 30 0 * * * * * * 3099 0 0 R 31 * 3205 * * 4290 * * 3151 * 1272 5080 * * * 2498 4125 * * * 4328 31 0 * * * * * * 3099 0 0 V 32 * * * * * * * 1710 * * * * * * * * 3329 749 * * 32 0 * * * * * * 3099 0 0 S 33 * * * 4408 * * * 4090 2606 * * * * 4290 * 559 * * * * 33 0 * * * * * * 3099 0 0 F 34 * * * * 3713 * * * * * * * * * * * * * 369 2743 34 0 * * * * * * 3099 0 0 N 35 * * 4059 * * 1893 * * * * * 672 * * * 4540 * * * * 35 0 * * * * * * 3099 0 0 G 36 * * 2818 2206 * 1235 * * 4330 * * 3362 * * * * * 3844 * * 36 0 * * * * * * 3099 0 0 A 37 3713 * 4090 * * 3408 3621 * 2990 * * 2662 * * 2303 4253 4109 * * 3431 37 0 * * * * * * 3099 0 0 P 38 * * 2622 1520 * * * * 3348 * * 4330 2059 * 4363 * 4253 * * * 38 0 * * * * * * 3099 0 0 A 39 1744 * * 4125 * * * * * * * * 748 * * 4363 * * * * 39 0 * * * * * * 3099 0 0 K 40 3844 * * * * * * * 283 * * * * * 4369 * * 4059 * * 40 0 * * * * * * 3099 0 0 F 41 * * * * 2039 * * 3844 * 3230 * * * * * * * * * 785 41 0 * * * * * * 3099 0 0 D 42 * * 0 * * * * * * * * * * * * * * * * * 42 0 * * * * * * 3099 0 0 I 43 * * * * * * * 506 * 2073 * * * * * * * 4109 * * 43 0 * * * * * * 3099 0 0 R 44 * * * * * * * * * * * * * * 0 * * * * * 44 0 * * * * * * 3099 0 0 A 45 2251 * 3165 2210 * 3339 * * * 4363 * * * * 3844 2705 3444 * * * 45 0 * * * * * * 3099 0 0 W 46 * * * * * * * * * * * * * * * * * * 0 * 46 78 4253 * 1000 1000 * * 3099 1000 0 S 47 3681 * 2587 * * 4873 * * * * * 2098 * 3844 * 1450 4253 * * * 47 0 * * * * * * 3099 0 0 P 48 4274 * 4253 3408 * 3844 * * 4408 * * * 1220 4746 * 2570 * 4328 * * 48 0 * * * * * * 3099 0 0 D 49 * * 720 1954 * 2890 * * * * * * * * * * * * * * 49 0 * * * * * * 3099 0 0 H 50 * * * 4253 4090 * 960 3844 4125 * * 4290 * * 2764 * * * * 4330 50 0 * * * * * * 3099 0 0 T 51 3844 * * 2155 * * * * 3204 4453 * * * 4363 * 2078 1909 * * * 51 104 * 3844 * * * * 3099 0 0 K 52 * * * 2544 * * 4022 * 1010 * * * * * 2610 3230 * * * * 52 0 * * * * * 0 2996 0 1000 M 53 * * * * * * * * * 4149 267 * * * * 4345 * * * 3978 53 0 * * * * 0 * 2996 0 1000 G 54 * * * * * 1108 * * 4330 4253 * * * * 4979 1980 2751 * * * 54 0 * * * * * * 3099 0 0 K 55 * * * * * * * * 72 * * * * * 4369 * * * * * 55 0 * * * * * * 3099 0 0 G 56 * * * 4090 * 87 * * * * * * * * * * * * * * 56 0 * * * * * * 3099 0 0 I 57 * * * * * * * 870 * 1976 * * * * * * * 2332 * * 57 0 * * * * * * 3099 0 0 T 58 * * * * * * * * * * * * * * * 3844 104 * * * 58 0 * * * * * * 3099 0 0 L 59 * * * * 3308 * * 3362 * 319 * * * * * * * * * * 59 0 * * * * * * 3099 0 0 S 60 * * * * * * * * 3844 * * * * * 4109 1505 1085 4363 * * 60 0 * * * * * * 3099 0 0 N 61 2480 * 4253 2736 * * 4290 * 2751 3391 * 3713 4746 * 2510 * 4873 * * * 61 0 * * * * * * 3099 0 0 E 62 4125 * 2255 821 * 4059 * * 4090 * * * * * * * 4369 * * * 62 0 * * * * * * 3099 0 0 E 63 * * * 89 * * * * * * * * * 4059 * * * * * * 63 0 * * * * * * 3099 0 0 F 64 1852 * * * 3713 * * 4125 * 1391 2672 * * * * * * 4290 * * 64 0 * * * * * * 3099 0 0 Q 65 5080 * 4363 4408 * * * 3329 1971 * 4274 * * 2777 2698 * * 2570 * * 65 0 * * * * * * 3099 0 0 T 66 2045 * 4369 3514 * * * 2862 3066 * * * * 4453 * 3429 4495 2890 * 4408 66 0 * * * * * * 3099 0 0 M 67 * * * * * * * * * 65 4495 * * * * * * * * * 67 0 * * * * * * 3099 0 0 V 68 * * * * * * * * 862 3150 3920 * * * 3154 * * 4345 * 3187 68 0 * * * * * * 3102 0 0 D 69 4105 * 1723 1767 * 4689 * * 2935 * * 3829 * * * * 4741 * * 3884 69 0 * * * * * * 3078 0 0 A 70 2124 * * 3991 * * * 1968 * 1578 * * * * * 4116 * 4072 * * 70 0 * * * * * * 3078 0 0 F 71 * * * * 3481 * * 2995 * 349 * * * * * * * * * * 71 0 * * * * * * 3078 0 0 K 72 2178 * 3215 * * 2578 * * 2461 * * 2637 * * * 3834 3453 * * * 72 0 * * * * * * 2824 0 0 G 73 * * 3784 3632 * 1405 * * 3127 * * 1495 * * * * * * * * 73 0 * * * * * * 2672 0 0 N 74 * * * 2917 * * * 972 * * 3060 3047 * * * * * 3094 * * 74 0 * * * * * * 2684 0 0 L 75 * * * * * * * * * 406 * * * * 2027 * * * * * 75 0 * * * * * * 2123 0 0 E 76 2000 * 2027 987 * * * * * * * * * * * * * * * * 76 0 * * * * * * 2123 0 0 H 77 1551 * * * * * 1595 * 1610 * * * * * * * * * * * 77 0 * * * * * * 1806 0 0 H 78 * * * 580 * * 1595 * * * * * * * * * * * * * 78 0 * * * * * * 1806 0 0 H 79 * * * * * * 0 * * * * * * * * * * * * * 79 0 * * * * * * 1494 0 0 H 80 * * * * * * 0 * * * * * * * * * * * * * 80 0 * * * * * * 1000 0 0 H 81 * * * * * * 0 * * * * * * * * * * * * * 81 0 * * * * * * 1000 0 0 H 82 * * * * * * 0 * * * * * * * * * * * * * 82 0 * * 0 * * * 1000 0 0 //