HHsearch 1.5 NAME c2l01A_ FAM FILE c2l01A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2l01A_.a3m DATE Sun Aug 29 00:46:46 2010 LENG 77 match states, 77 columns in multiple alignment FILT 20 out of 24 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4643 1.8156 SEQ >ss_dssp CCCHHHHHHHHHHHHHHHHTTSSCEEHHHHHHHHTCSCHHHHHHHHHHHHHTTCEEEEEETTEEEEEECSSCCCCCC >sa_dssp EEEEEEDBDEBADDADEBAEECEBCBCEDACEDBEBECDECADEABDCAEEDECBDCBDDEEBDCACCEEEEDEEEE >ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCC >ss_conf 96526787577899999981388415999988738882489999723575418265783044368757776552059 >Consensus xxMxkxxIGxnAGxIWxxLxexxxxSxxxLkkxtxlxxdxexxxAiGWLARExKIxfxexxgelxvsLvxxxxxxxx >c2l01A_ MKMLKEKAGALAGQIWEALNGTEGLTQKQIKKATKLKADKDFFLGLGWLLREDKVVTSEVEGEIFVKLVLEHHHHHH >UniRef50_A7M526(2-66:74) Putative uncharacterized protein n=8 Tax=Bacteroides RepID=A7M526_BACOV E=3e-14 s/c=1.22 id=35% cov=86% --MEKTKIGLNAGKVWRILNEKGELSMFDLCRELSLTFE-DVALAIGWLAREDKIFLRKREGMLFASI--------- >UniRef50_B6YS21(8-68:69) Putative uncharacterized protein n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YS21_AZOPC E=2e-11 s/c=1.16 id=34% cov=81% ------EIGSNAGRVWSLLNEEGTKSVKEIIKRTKF-SELEIYLSVGWLAREGKLNFEEQNNEMYLSL--------- >UniRef50_C3QJ94(1-65:72) Putative uncharacterized protein n=13 Tax=Bacteroides RepID=C3QJ94_9BACE E=9e-16 s/c=1.30 id=33% cov=86% --MNRNEIGVNAGKVWQLLSNNEKWSYGLLKRKSGLK-DKELGAALGWLSRENKIEFDQCDEELYVYL--------- >UniRef50_C2MDB2(9-69:70) Putative uncharacterized protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MDB2_9PORP E=1e-13 s/c=1.27 id=41% cov=79% --------GTNAGLIWNALDKLGKMDVKQLKKATKIRTEKDVYAALGWLAKEEKLTFVYEDGTLLVSL--------- >UniRef50_A6BZF6(11-75:75) Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZF6_9PLAN E=3e-12 s/c=1.12 id=27% cov=86% -----ESIGVVAGVVWQYLSEHEPVTLSKLSREIEAPRDL-VMQAVGWLGREGKIEFHQGSRSKLISLVNE------ >UniRef50_Q602J4(9-71:71) Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q602J4_METCA E=9e-10 s/c=1.03 id=31% cov=66% -------VGNAAGKIWHFLDQNGEASASRLADETGLDRN-EVQRAIGWLAREGKLVTE------------------- >UniRef50_B7B9K9(1-65:74) Putative uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B9K9_9PORP E=0.0003 s/c=0.72 id=35% cov=86% --MTKNDVVSEAGQIWSLLSERKILSVKRIGEMTHYH-ESLVCLALGWLVKENKVRLFEKSGVLHAEL--------- >UniRef50_B5CWG3(1-64:73) Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CWG3_9BACE E=0.0006 s/c=0.71 id=23% cov=81% --MKNSNVKSNAEFIGKLIADNRTWSFKELKSASSF-SDMELALALGWLMHQNHILLKEENEEV------------- >UniRef50_A6USY0(6-70:72) Putative uncharacterized protein n=2 Tax=Methanococcales RepID=A6USY0_META3 E=4e-08 s/c=0.91 id=33% cov=83% -----NKIGEIAGEIYHILKE-GEKNMSGLKKPLKEKgyTDSLITMAIGWLARENKIDIYKQERQTIVKLI-------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 M 3 * * * * * * * * * * 0 * * * * * * * * * 3 0 * * * * * * 2897 0 0 L 4 * * 2551 2452 * * * * 2884 2955 * 2582 * * * * 2218 * * * 4 0 * * * * * * 2897 0 0 K 5 * * * * * * * * 353 * * 2884 * * 3614 * * * * * 5 0 * * * * * * 2897 0 0 E 6 * * * 1998 * 3014 3201 * * * * 2154 * 3979 * 3233 4088 * * 3970 6 0 * * * * * * 3367 0 0 K 7 * * 3646 2636 * * * 4165 2289 3999 * 3324 * 4576 3038 2533 * * * * 7 0 * * * * * * 3407 0 0 A 8 3691 * * * * * * 541 * * * * * * * * * 2087 * * 8 0 * * * * * * 3489 0 0 G 9 * * * 4383 * 329 * * 3447 * * * * * * * * 3957 * * 9 0 * * * * * * 3523 0 0 A 10 3385 * * 2009 * * * * 4383 2918 * 4141 * * * 2297 3466 3000 * * 10 0 * * * * * * 3523 0 0 L 11 4141 * * 3957 * * * 4014 4342 4044 * 832 * * * 4577 4334 4216 * * 11 0 * * * * * * 3523 0 0 A 12 0 * * * * * * * * * * * * * * * * * * * 12 0 * * * * * * 3523 0 0 G 13 * * * 3447 * 139 * * * * * * * * * * * * * * 13 0 * * * * * * 3523 0 0 Q 14 3412 * * 4014 3447 * * 4577 1935 2413 * * * 3000 4400 4833 * 4216 * * 14 0 * * * * * * 3523 0 0 I 15 * * * * * * * 936 * 4448 * * * * * * * 1212 * * 15 0 * * * * * * 3523 0 0 W 16 * * * * * 3447 * * * * * * * * * * * * 241 4014 16 0 * * * * * * 3523 0 0 E 17 * * * 4044 * * 2597 * 2578 * * 2198 * 3457 3524 2247 * * * * 17 0 * * * * * * 3523 0 0 A 18 2411 * * * 4141 * * 3279 * 1277 * * * * * * 4334 3525 * 3278 18 0 * * * * * * 3523 0 0 L 19 * * * * * * * 3447 * 139 * * * * * * * * * * 19 0 * * * * * * 3523 0 0 N 20 3447 * 3291 * * * 2507 * 4014 * * 1632 * * * 2025 * * * * 20 62 4577 * 0 * * * 3523 1000 0 G 21 4334 * 2239 1169 * 4044 * * 4457 * * 4745 * 4141 * * 3415 * * * 21 164 4448 4014 1000 1000 * * 3523 1000 0 T 22 * * 4253 4284 * 3412 3251 * 4436 4360 * 1442 * * 3040 * 3984 4334 * * 22 0 * * * * 0 * 3443 0 1000 E 23 * * * 2721 * 1212 * * 3347 * * 4419 * 4494 2479 * * * * 4383 23 0 * * * * * * 3523 0 0 G 24 * * * 2050 * 4044 4494 3957 2214 * * * 2711 * 4883 * 2846 * * 4383 24 0 * * * * * * 3523 0 0 L 25 4141 * * * * * * 4419 3194 2313 2836 * * * * 4342 * 4216 1544 * 25 0 * * * * * * 3523 0 0 T 26 * * 3633 4577 * * * * * * * 4014 * * * 610 2642 * * * 26 0 * * * * * * 3523 0 0 Q 27 4141 * 4342 * 2466 * * * * 2440 3279 * * 4044 * * 4419 2669 * 2635 27 0 * * * * * * 3523 0 0 K 28 * 4883 * 4494 4603 4745 * * 1496 * * * * 2895 4342 2172 3590 * * * 28 0 * * * * * * 3523 0 0 Q 29 3484 * 3736 1637 * 4014 * * 3492 4745 * 4342 * 3236 2551 * * * * * 29 0 * * * * * * 3523 0 0 I 30 * * * * * * * 2173 * 541 * * * * * * * 3461 * * 30 0 * * * * * * 3523 0 0 K 31 4141 4603 * * * 3957 * 4400 1004 * * * * * 3437 2738 * 4334 * * 31 0 * * * * * * 3523 0 0 K 32 4494 * 3287 3957 * * * * 1342 * * * * 4577 2232 3447 4383 * * * 32 0 * * * * * * 3523 0 0 A 33 1633 * * 2092 * * * * 2492 * 3957 * 4014 4334 4400 * * 4577 * * 33 0 * * * * * * 3523 0 0 T 34 * * * * * * * 4216 * 2739 * * * * * 1971 1024 4334 * * 34 0 * * * * * * 3523 0 0 K 35 4494 * * 3512 * 1834 3155 * 1759 * * * * * * 2477 * * * * 35 0 * * * * * * 3523 0 0 L 36 4216 * * 4014 2436 * * 3466 * 877 * * * * * * * * * 3957 36 515 * 1735 * * * * 3523 0 0 K 37 * * 3806 * * * 3343 * 1769 * * 3939 2827 * 2901 2909 3977 * * * 37 683 3541 1780 1000 1000 0 * 3382 1000 2313 A 38 2906 * * * 4317 * * 4175 4046 * * * * * 2355 1658 2409 * * * 38 0 * * * * 0 * 3379 0 2164 D 39 * * 814 1417 * * * * * * * 4141 * * * * * * * * 39 311 * 2367 * * * * 3523 0 0 K 40 4141 * * * * * 3972 * 2099 2416 2645 * * * 3396 2660 4451 * * * 40 208 * 2897 * * 0 * 3336 0 1913 D 41 * * 1510 973 * * * * * 2842 * * * * * * * * * * 41 0 * * * * 0 * 3368 0 1452 F 42 4448 * * * 4044 * * 2792 * 1540 4474 * * * * * 4342 1685 * * 42 0 * * * * * * 3523 0 0 F 43 2150 3957 * * 4044 3553 * * * 4833 3274 3722 * 4141 * * 4014 * 3416 2858 43 0 * * * * * * 3523 0 0 L 44 2031 * * * * 4342 * * * 1507 4014 * * 3274 4141 2920 * * * * 44 0 * * * * * * 3523 0 0 G 45 165 * * * * 4044 * * * * * * * * * 4400 * * * * 45 0 * * * * * * 3523 0 0 L 46 * * * * 4474 * * 986 * 1520 * * * * * * * 3305 * * 46 0 * * * * * * 3523 0 0 G 47 * * * * * 0 * * * * * * * * * * * * * * 47 0 * * * * * * 3523 0 0 W 48 * * * * * * * * * * * * * * * * * * 0 * 48 0 * * * * * * 3523 0 0 L 49 * * * * * * * * * 0 * * * * * * * * * * 49 0 * * * * * * 3523 0 0 L 50 531 * * * * 4216 * * * 4044 3447 * * * * 4745 * 3957 * * 50 0 * * * * * * 3523 0 0 R 51 * * * * * * 2841 * 2691 * * * * * 503 * * * * * 51 0 * * * * * * 3523 0 0 E 52 * * * 139 * * * * * * * * * 3447 * * * * * * 52 0 * * * * * * 3523 0 0 D 53 * * 2029 4457 * 1603 * * * * * 1395 * * * * * * * * 53 0 * * * * * * 3523 0 0 K 54 * * * * * * 3447 * 215 * * 4419 * * * * * * * * 54 0 * * * * * * 3523 0 0 V 55 * * * * * * * 782 * 2034 * * * * * * * 2520 * * 55 0 * * * * * * 3523 0 0 V 56 3213 * 3184 3221 4321 * * * * 2740 * 4245 * 3307 3670 * 4277 2917 * 4086 56 0 * * * * * * 3552 0 0 T 57 * * * * 1115 * * 2969 * 2108 * * * * * 4434 2917 * * * 57 0 * * * * * * 3552 0 0 S 58 * * 3403 1659 3670 * 4021 * 3274 * * * * * 4321 3846 4086 3353 * 3860 58 0 * * * * * * 3552 0 0 E 59 * 4371 * 825 * * * * 2897 * * * * 3013 3883 * * * * 4029 59 0 * * * * * * 3465 0 0 V 60 * 3941 * 2441 * 3463 * 3876 2593 * * * * 2685 3924 4059 4029 3581 * * 60 0 * * * * * * 3458 0 0 E 61 * * 2883 1714 * * * * 4029 * * 1663 * * * 2453 * * * * 61 0 * * * * * * 3458 0 0 G 62 * * * 2405 * 868 * * * * * 3776 * * 2395 * * * * * 62 0 * * * * * * 3475 0 0 E 63 * * 3965 1222 * * * * * 3695 3861 * * 3443 * 3348 3740 3379 * * 63 0 * * * * * * 3475 0 0 I 64 * * * * * * * 3362 3231 1253 2691 * * * * * 3346 3019 * * 64 0 * * * * * * 3457 0 0 F 65 * * * * 2338 * 3026 3189 * 2302 * * * * * * * * * 1446 65 0 * * * * * * 3188 0 0 V 66 2227 * * * * * * 3122 * 3421 * * * * * * * 790 * * 66 0 * * * * * * 3188 0 0 K 67 * * * 3026 * * * * 2207 * * * * * * 825 * * * 3379 67 0 * * * * * * 3188 0 0 L 68 * * * * * * * 3198 * 166 * * * * * * * * * * 68 0 * * * * * * 3107 0 0 V 69 * * * * * * * 1970 * * * * * * * * * 425 * * 69 0 * * * * * * 2328 0 0 L 70 * * * * * * * * * 978 * 1022 * * * * * * * * 70 0 * * * * * * 1638 0 0 E 71 * * * 0 * * * * * * * * * * * * * * * * 71 0 * * * * * * 1638 0 0 H 72 * * * * * * 0 * * * * * * * * * * * * * 72 0 * * * * * * 1000 0 0 H 73 * * * * * * 0 * * * * * * * * * * * * * 73 0 * * * * * * 1000 0 0 H 74 * * * * * * 0 * * * * * * * * * * * * * 74 0 * * * * * * 1000 0 0 H 75 * * * * * * 0 * * * * * * * * * * * * * 75 0 * * * * * * 1000 0 0 H 76 * * * * * * 0 * * * * * * * * * * * * * 76 0 * * * * * * 1000 0 0 H 77 * * * * * * 0 * * * * * * * * * * * * * 77 0 * * 0 * * * 1000 0 0 //