HHsearch 1.5 NAME c2kitA_ FAM FILE c2kitA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2kitA_.a3m DATE Thu Jan 10 07:02:59 2013 LENG 33 match states, 33 columns in multiple alignment FILT 102 out of 241 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.4510 2.8330 SEQ >ss_dssp CCSCSTHHHHHHHHHHHHHHHHHHHHTSSCSCC >sa_dssp EEEEEDCEEDDEEEDCECDDEEBEEEEDECDEE >ss_pred CCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCC >ss_conf 977889999999999429888997177714689 >Consensus xxLsvxxQVxxLIxeAtdxxNLxxmyxGWxPxw >c2kitA_ NELDVPEQVDKLIQQATSIERLCQHYIGWCPFW >UniRef50_Q6CP76(2729-2761:2761) Serine/threonine-protein kinase TEL1 n=1 Tax=Kluyveromyces lactis RepID=ATM_KLULA E=1e-06 s/c=1.64 id=35% cov=103% DGLSVEAIVQELLSSATDKQNLATIYMGWSPFY >UniRef50_A2FS60(2100-2130:2130) PIKK family atypical protein kinase n=1 Tax=Trichomonas vaginalis RepID=A2FS60_TRIVA E=3e-06 s/c=1.71 id=38% cov=97% --LTPEEQVSRLINDAVDKYNISHLYTGWAPLW >UniRef50_Q553E9(2313-2343:2344) Probable serine/threonine-protein kinase smg1 n=2 Tax=cellular organisms RepID=SMG1_DICDI E=9e-06 s/c=1.66 id=34% cov=97% -KLSIPDQIDLIIRESMNVENLSSTYEGWSPW- >UniRef50_UPI0001757D34(2317-2348:2349) PREDICTED: similar to protein kinase, DNA activated, catalytic polypeptide n=1 Tax=Tribolium castaneum RepID=UPI0001757D34 E=2e-05 s/c=1.56 id=30% cov=100% NGLSEEDQAICLIDHATDYNLLGRMFEGWAAW- >UniRef50_C4QF28(3106-3137:3138) Ataxia telangiectasia mutated (Atm), putative n=1 Tax=Schistosoma mansoni RepID=C4QF28_SCHMA E=6e-05 s/c=1.52 id=30% cov=100% DQLDVAGHIGLLVRAATDYSNLSRMYFGWQAY- >UniRef50_A9CTS8(488-518:519) DNA repair protein rad3 n=1 Tax=Enterocytozoon bieneusi H348 RepID=A9CTS8_ENTBH E=0.0001 s/c=1.55 id=31% cov=97% -TMEIEEKINTLVEEAISVENLREMFIGWMPY- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * 1663 1407 * * 2641 * * * * 2767 * * * * * * * * 1 0 * * * * * * 3481 0 0 E 2 * * 4421 1944 * 2635 * * 1975 * * 4968 * 3303 * * 2788 * * * 2 0 * * * * * * 4000 0 0 L 3 * * * * * * * 4707 5320 339 2775 * * * * * * * * * 3 0 * * * * * * 4172 0 0 D 4 6428 * 3110 5160 * 5013 * * 5913 * * 4268 6101 6753 * 675 3399 * * * 4 0 * * * * * * 4347 0 0 V 5 4684 4429 * 5654 * * * 2653 * 4473 * * 4315 * * * 4082 833 * 5642 5 0 * * * * * * 4360 0 0 P 6 4185 5221 5170 1219 * 5442 4610 * 3229 * 7009 6443 4627 4173 4243 4111 4260 6372 * * 6 0 * * * * * * 4360 0 0 E 7 3233 * 3437 2140 * 1953 6869 * 4361 * 5955 5659 * 4298 * 3311 5226 5186 * 5855 7 0 * * * * * * 4388 0 0 Q 8 * * 6416 4684 * * 3739 6489 4690 6613 * * * 452 5857 6630 4806 6979 * 6346 8 0 * * * * * * 4388 0 0 V 9 4012 5298 * * * * * 3565 * 6235 * * * * * * 5290 341 * * 9 0 * * * * * * 4388 0 0 D 10 4410 * 1802 3360 * 4029 4598 5333 6084 * * 2865 * 2704 4744 3694 5541 * * * 10 0 * * * * * * 4388 0 0 K 11 5043 5250 4467 3040 6385 * 4789 5813 2549 3858 4684 6368 * 3456 2357 4841 4877 4971 6493 5536 11 0 * * * * * * 4388 0 0 L 12 * * * * * * * 5016 * 165 6083 * * * * * * 3995 * * 12 0 * * * * * * 4388 0 0 I 13 * * * * * * * 285 * 4018 6084 5298 * * * * * 3692 * * 13 0 * * * * * * 4388 0 0 Q 14 4397 * 3695 3324 6263 * 5302 * 2934 5346 * 2847 * 2600 3261 2676 * 5886 * * 14 0 * * * * * * 4388 0 0 Q 15 4673 * 4351 1308 * * 4517 4476 6013 5372 6713 6263 * 2125 * 3974 5985 4365 * * 15 0 * * * * * * 4388 0 0 A 16 112 * * * * * * * * * * * * * * 3749 * * * * 16 0 * * * * * * 4388 0 0 T 17 5537 5978 * * * * * 3871 6211 * 4236 * * 4218 4116 3588 794 4147 * * 17 0 * * * * * * 4388 0 0 S 18 4734 6211 1094 * * * * * 5029 6368 * 2522 * * 5550 2045 * * * * 18 0 * * * * * * 4388 0 0 I 19 5251 * 4764 4099 * * 3471 3855 3999 3919 4599 5358 2028 * 4906 * 3802 2974 * 4394 19 0 * * * * * * 4388 0 0 E 20 4774 * 3095 1902 * * 4023 7051 3700 5522 5845 3901 6668 5168 4065 3567 4265 6013 * 3692 20 0 * * * * * * 4388 0 0 R 21 5455 * * 6468 * * 6235 6062 4774 4571 * 405 * 6622 4045 * * 6159 * 5694 21 0 * * * * * * 4388 0 0 L 22 * * * * 5956 * * 3945 * 269 * * * * * * * 5873 * 3794 22 0 * * * * * * 4388 0 0 C 23 1672 1772 * * * 4253 * 6760 5766 * * * * * 6230 2017 5692 4891 * * 23 0 * * * * * * 4388 0 0 Q 24 5462 6493 * 4549 * * 4639 * 2842 4006 4520 7042 * 1981 2492 4274 3791 3985 * 6346 24 0 * * * * * * 4388 0 0 H 25 4516 * * * * 5905 4008 3992 * 2831 876 5187 * * * 4427 5184 5170 * * 25 0 * * * * * * 4388 0 0 Y 26 * * * * 1856 * 5978 * * * * * 4686 * * * * * 4221 700 26 0 * * * * * * 4388 0 0 I 27 4439 4887 6397 3428 5078 6116 4511 2261 4723 3951 6489 7057 3768 4662 4063 3622 5586 3121 * 6962 27 24 5905 * 0 * * * 4388 1000 0 G 28 * * * * * 148 * * * * * * * * * 5678 * * 4098 5694 28 0 * * * * * * 4388 0 0 W 29 * * * * * * * * * * * * * * * * * * 40 5187 29 0 * * * * * * 4388 0 0 C 30 2895 2619 6368 6062 5990 4217 5334 4787 6338 4904 2999 4003 * 4223 6159 3432 3542 4602 * 5333 30 0 * * * * * * 4388 0 0 P 31 2284 * * * * * * * * * * * 395 * * 4871 * * * * 31 0 * * * * * * 4388 0 0 F 32 * * * * 1781 * 5831 * * 3654 * * * * * * * * 1222 2448 32 23 5976 * 0 * * * 4389 1000 0 W 33 * * * * * * * * * * * * * * * * * * 190 3016 33 0 * * 0 * * * 3584 0 0 //