HHsearch 1.5 NAME c2kaeA_ FAM FILE c2kaeA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2kaeA_.a3m DATE Thu Mar 11 20:03:05 2010 LENG 56 match states, 56 columns in multiple alignment FILT 113 out of 487 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4919 1.9345 SEQ >ss_dssp CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHHHHHSCCCTHHHHHHHHHHTTCC >sa_dssp EEDBDEDDEEEBEECDCEEEEDCCAADDBCDDDDEEEEEDDEEDCEEDCEEDEEEE >ss_pred CCCCCCCCCCCCCHHHCCCCCCCCEECCHHHHHHHHCCCCCCCHHHCCCCHHHHCC >ss_conf 96233589888870111099985203005689997088998510001631353079 >Consensus sxxCxnCgttxTpxWRxxxxgxxxLCNACGlxxxxxxxxRPxxxxxxxxxkxxxrq >c2kaeA_ SFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRPVTAVNKYQKRKLKVQ >UniRef50_A8Q5F3(414-455:1044) GATA zinc finger family protein n=2 Tax=Brugia malayi RepID=A8Q5F3_BRUMA E=0.0002 s/c=1.11 id=23% cov=77% AYACHHCYTSKSKDWHHSGRERQLLCTECRVFYKKYGQLRPV-------------- >UniRef50_Q01D45(212-267:294) GATA-4/5/6 transcription factors (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D45_OSTTA E=1e-07 s/c=1.04 id=28% cov=96% ---CDHCGALESPQWRRGPAAKPMLCNACGTRYRRTNNLGPsplLRAAALGKRKTLSQQ >UniRef50_Q9URT4(351-404:697) CENP-A multicopy suppressor protein 2 n=1 Tax=Schizosaccharomyces pombe RepID=AMS2_SCHPO E=1e-06 s/c=1.01 id=30% cov=95% ---CQNCGTIKTANWRNATymNITLMLCNACGIYWTSRRSMRPRNLWSTYKAFETEK- >UniRef50_Q02710(130-180:187) Protein ECM23 n=6 Tax=Saccharomyces cerevisiae RepID=ECM23_YEAST E=9e-06 s/c=1.01 id=29% cov=88% --ECATCGDTWTSQWRSGPNGNVELCSRCGIAYRKKmeKKIRSQQSSDDGTK------ >UniRef50_A8NAE9(143-196:527) Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NAE9_COPC7 E=1e-12 s/c=1.38 id=29% cov=98% ALSCANCGTSTTPLWRRDDVGN-NICNACGLYFKLHGTHRPNSMKKTVIKRRKRV- >UniRef50_C7YR64(408-460:460) Putative uncharacterized protein n=2 Tax=Nectriaceae RepID=C7YR64_NECH7 E=7e-09 s/c=1.16 id=25% cov=95% ----TNCNRIDTPEWRRGPDGARTLCNACGLHYAKLERKRQLEARSiRPKPEEAHRQ >UniRef50_C1MHR1(322-375:1645) Bromodomain-containing protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MHR1_9CHLO E=4e-08 s/c=1.10 id=29% cov=93% --KCRNCGClrENTTKMRPGPSGLGSLCNACGMYWATQGRLRPAGVMDDDYERAV--- >UniRef50_Q4U945(500-547:547) GATA-specific transcription factor, putative n=2 Tax=Theileria RepID=Q4U945_THEAN E=8e-06 s/c=1.07 id=35% cov=88% -YSCSNCNVKTTPQWR--YYKGVAVCNACYMRIRKDKTQSTQNPKGKNKKK----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 2322 * * * * * * * * * * * * * * 881 1960 * * * 1 0 * * * * * * 3448 0 0 F 2 * * * * 3618 * 3264 * 3401 2114 2816 * * 3568 * * 3744 * * 2413 2 0 * * * * * * 3728 0 0 Q 3 3283 * * 2080 * * 3680 * 3512 * * 5478 * 2786 1921 3976 * * * * 3 0 * * * * * * 4351 0 0 C 4 * 0 * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 4648 0 0 S 5 2966 5866 5037 5476 4477 5830 3993 6483 5359 4272 * * * 5651 4736 1690 3548 3822 5747 4404 5 16 6537 * 1000 1000 * * 4645 1000 0 N 6 6900 6643 5232 * 6815 5270 2732 4601 5855 5632 * 881 * 4454 6417 4318 5319 6857 * 7175 6 51 4841 * 1000 1000 * * 4645 1950 0 C 7 * 0 * * * * * * * * * * * * * * * * * * 7 0 * * * * * * 4645 0 0 S 8 * * 6626 5663 5474 844 3457 * 4635 5655 6276 4184 * 5490 3726 4238 * * * 5599 8 0 * * * * * * 4645 0 0 V 9 3196 3669 5775 6696 * 5218 * 4234 * * * * * * 4120 3367 1094 3620 * * 9 16 6539 * 1000 1000 * * 4645 1000 0 T 10 5983 * 4829 6539 7113 7286 5209 4241 4058 4465 4745 * 4834 5427 3873 2769 1333 5256 * 7474 10 48 4930 * 1000 1000 * * 4645 1679 0 E 11 5343 * 3457 2006 * * 4403 6849 2569 6900 7453 3937 * 3827 * 3305 3314 5050 5775 6533 11 10 7139 * 1000 1000 * * 4645 1000 0 T 12 4692 * * * * * * * * * * * 5985 * * 2189 462 * * * 12 0 * * * * * * 4645 0 0 I 13 4925 5323 5866 * * * * 4150 3883 6061 * * 737 * * 3425 3428 * * * 13 21 * 6115 * * * * 4645 0 0 R 14 4194 5320 5582 2630 6820 * 6410 6040 5677 1500 4955 5257 * 2927 4043 4649 6803 5577 * 6835 14 14 6684 * 0 * 0 * 4640 1000 1072 W 15 * * * * * * * 5178 * * 4180 * * * * * * * 125 * 15 66 4482 * 1000 1000 * * 4645 1524 0 R 16 * * 5713 * * * 4598 * * 6081 * * * 5632 144 * * * * * 16 39 6483 6013 4392 70 * * 4645 1000 0 N 17 7057 * 6893 4640 * 6690 5174 7067 2313 5746 7171 3711 5159 5583 1364 4035 4135 6592 5048 * 17 60 4916 6991 2574 265 * 0 4610 1855 1000 I 18 4510 * 3100 * * 1127 5690 5357 6998 6257 5224 3511 6636 * * 3277 5195 4429 6003 * 18 24 7251 6677 1585 585 1000 1000 4607 1000 1580 R 19 5375 * 4620 4032 * 3450 * * 3871 6118 * 4625 1106 * 4659 5983 3873 5123 6083 5170 19 87 4484 6196 872 1140 0 * 4642 2030 1436 S 20 3813 6553 2266 2956 * * 6684 7257 * 3371 6158 3193 5858 4802 4409 2895 4098 5948 6998 5157 20 61 6202 5174 2000 415 * 0 4633 1472 1000 K 21 6355 * 4633 4007 * 520 * 5999 3504 * * 5257 6875 * 6259 5348 6422 * * * 21 157 4196 4359 606 1544 458 1878 4626 2275 1864 E 22 4518 * 3281 3182 * 4415 4801 6582 3293 5459 5508 3378 2467 4823 3672 4410 4108 7055 * * 22 207 5151 3245 0 * 189 3023 4647 1609 2316 G 23 3696 * 5927 * * 2862 5501 5835 2628 4921 6450 6448 3708 5501 2141 4155 3995 3890 * * 23 84 5837 4669 1015 985 115 3701 4659 1414 2969 I 24 5988 6658 5238 5743 5718 * * 3836 4147 2565 3848 7093 5605 6975 * 2991 2157 3049 * 4692 24 126 4662 4492 698 1382 284 2483 4623 2290 2022 Q 25 * * * 4485 5607 * * 4910 * 499 5592 6047 * 4682 * * * 3066 * * 25 0 * * * * 206 2910 4666 0 2158 C 26 * 0 * * * * * * * * * * * * * * * * * * 26 0 * * * * * 0 4642 0 1000 N 27 5588 * 4608 * * 5171 * * * * * 246 * * * 5764 4362 * * * 27 0 * * * * * 0 4642 0 1000 A 28 490 * 5848 5589 * 5053 * 5973 5299 * * * 4801 * 4960 4272 5171 5025 * * 28 0 * * * * 0 * 4642 0 1000 C 29 * 27 * * * * * * * * * * * * * * 5727 * * * 29 0 * * * * * * 4645 0 0 F 30 6778 * * * 4436 290 * * * * * 5045 * * 4051 6537 * * 6697 6013 30 0 * * * * * * 4645 0 0 I 31 * * * * * * * 2399 4560 942 4169 * * 6115 * 4770 4461 3390 * * 31 55 5538 5993 0 * * * 4645 1807 0 Y 32 5052 6994 * * 2774 * 4469 * 5967 4675 * * * 6064 2328 6687 * 6617 3832 1282 32 7 7647 * 2322 322 960 1041 4643 1000 1414 Q 33 4845 6133 6660 4234 3036 * 4452 6012 4551 4605 7377 5370 * 4758 5025 5698 * 4798 2672 1685 33 59 5103 6499 1457 653 0 * 4646 1824 1000 R 34 3186 * * 5964 * * 4557 * 1932 * 5784 4399 * 4662 1589 3428 5406 6008 * * 34 14 * 6671 * * 0 * 4637 0 1000 K 35 4423 * * 5008 * * 7012 6684 1470 2422 4794 4917 * 4963 2960 6069 3476 6632 * 6324 35 70 7198 4627 1000 1000 * 0 4645 1000 1000 Y 36 5876 * 5875 4855 5542 5650 1784 5557 2807 3814 6576 3233 5759 5187 3958 5184 6228 6652 * 3531 36 60 4814 7533 1012 988 1258 781 4704 1923 2262 N 37 6237 6818 5812 5841 * 1393 6023 6555 1879 4730 * 3789 5921 5274 3658 4943 * * * * 37 9 * 7316 * * 1002 998 4703 0 2174 K 38 3668 5389 6658 5025 4444 * 5869 5269 2437 * 5734 6264 * 3843 2259 5490 2743 3305 * * 38 0 * * * * 1481 640 4689 0 1864 T 39 4083 6543 3671 6276 * 5920 4382 4688 3733 2859 3079 3747 3174 4220 4094 5963 4926 4629 * 5851 39 0 * * * * * 0 4553 0 1719 R 40 5932 * * 5650 * 5297 * * 4918 5271 6881 7075 5394 5449 391 4715 * 5957 * * 40 21 6085 * 1824 479 * 0 4553 1415 1719 P 41 4802 * 6446 5486 * 6263 * 5074 * 6220 * 6133 363 5177 * 5312 5087 * * * 41 47 6083 5858 1585 585 * 0 4606 1000 1719 V 42 3613 * 6294 5228 5488 6515 6753 4180 4208 2217 6959 5527 3887 3882 4211 4708 4023 2639 * 4941 42 117 4451 4971 1534 611 658 1449 4576 1912 2133 T 43 4166 * 4878 3447 5585 4381 5058 6278 4326 5632 5827 3179 * 4115 5312 2145 2605 4816 * * 43 30 6935 6301 2322 322 379 2115 4769 1000 2133 A 44 2466 5455 * * * 3919 * 4276 5671 2560 2957 6275 2782 4701 4604 4133 6533 4190 * * 44 32 5494 * 1663 548 * 0 4754 1408 1401 V 45 4907 6341 * * * * * 3806 3129 4538 3453 4719 4336 * 2262 2405 5072 4298 3861 * 45 28 5700 * 1691 535 882 1128 4804 1456 1401 N 46 3726 * 3745 3583 * 3794 4549 6057 2768 * * 2659 4981 4144 3558 3521 4512 6008 * 6408 46 56 5130 6698 1279 766 0 * 4802 1875 1000 K 47 5320 * 3181 3872 * 4745 * * 2040 5122 6058 4418 5327 3888 3114 2839 3953 * * 6244 47 0 * * * * 0 * 4800 0 1000 Y 48 4856 * 5417 4680 * 1652 5544 4631 5283 6348 5690 3782 3556 4537 4055 4765 6507 5595 * 2875 48 13 6840 * 1585 585 * * 4790 1000 0 Q 49 4669 * 6296 * * 4096 * 4956 2076 * * 5884 5226 3156 1928 3147 4435 6311 * 5070 49 21 6123 * 1585 585 * * 4825 1000 0 K 50 4509 5548 5690 3329 * 6187 6277 6178 2097 5508 * 5593 4323 4782 2591 2969 3071 * * * 50 18 6325 * 1000 1000 * * 4812 1000 0 R 51 5824 * * 5297 5169 6156 6210 * 1550 5398 * 6058 4551 3532 1541 5949 4943 * * * 51 0 * * * * * * 4763 0 0 K 52 2124 * * 2857 * 5023 * 5902 2375 * * 5099 * 5223 2197 3850 4354 * * * 52 0 * * * * * * 4648 0 0 L 53 2222 * * * * * 5180 4890 3214 2338 * * 4879 4698 2941 4864 3756 3478 * 5805 53 0 * * * * * * 4559 0 0 K 54 5778 * 5675 2137 5544 * 4380 * 2225 * * 5029 4668 3537 2812 3519 5398 4575 * * 54 0 * * * * * * 4408 0 0 V 55 * * * * * * * 5588 2265 * * * * 4682 872 5262 5217 2911 * * 55 0 * * * * * * 4330 0 0 Q 56 * * * 3752 * * * * 2725 * * * * 599 3127 * * * * * 56 0 * * 0 * * * 3761 0 0 //