HHsearch 1.5 NAME c2k9yA_ FAM FILE c2k9yA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2k9yA_.a3m DATE Sat Aug 28 21:43:02 2010 LENG 41 match states, 41 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.4976 3.0516 SEQ >ss_dssp CCCCCCCCCCSSTHHHHHHHHHHHHHHHHHHHHHSSSSSCC >sa_dssp EEEEEEEEEEDEECEECEECDCEEEEEDEDDDDEEEEEEEE >ss_pred CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 97244776668555640489999999999632677763049 >Consensus efqtxspexsgnlaviggvavgivlllvlagigxfihrrrk >c2k9yA_ EFQTLSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRK >UniRef50_UPI00005A03D8(363-404:819) PREDICTED: similar to Ephrin type-A receptor 2 precursor (Tyrosine-protein kinase receptor ECK) (Epithelial cell kinase) isoform 5 n=2 Tax=Euteleostomi RepID=UPI00005A03D8 E=3e-10 s/c=1.58 id=85% cov=95% EFQTRSPltatEASGNLAVIGGVAVGIVLLLVLAGIGLFIHR--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * * 0 * * * * * * * * * * * * * * * * 1 0 * * * * * * 1095 0 0 F 2 * * * * 0 * * * * * * * * * * * * * * * 2 0 * * * * * * 1095 0 0 Q 3 * * * * * * * * * * * * * 0 * * * * * * 3 0 * * * * * * 1095 0 0 T 4 * * * * * * * * * * * * * * * * 0 * * * 4 0 * * * * * * 1095 0 0 L 5 * * * * * * * * * 1000 * * * * 1000 * * * * * 5 0 * * * * * * 1095 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1095 0 0 P 7 * * * * * * * * * * * * 0 * * * * * * * 7 1000 1000 * 2000 415 * * 1095 1000 0 E 8 * * * 0 * * * * * * * * * * * * * * * * 8 0 * * * * * * 1095 0 0 G 9 1000 * * * * 1000 * * * * * * * * * * * * * * 9 0 * * * * * * 1095 0 0 S 10 * * * * * * * * * * * * * * * 0 * * * * 10 0 * * * * * * 1095 0 0 G 11 * * * * * 0 * * * * * * * * * * * * * * 11 0 * * * * * * 1095 0 0 N 12 * * * * * * * * * * * 0 * * * * * * * * 12 0 * * * * * * 1095 0 0 L 13 * * * * * * * * * 0 * * * * * * * * * * 13 0 * * * * * * 1095 0 0 A 14 0 * * * * * * * * * * * * * * * * * * * 14 0 * * * * * * 1095 0 0 V 15 * * * * * * * * * * * * * * * * * 0 * * 15 0 * * * * * * 1095 0 0 I 16 * * * * * * * 0 * * * * * * * * * * * * 16 0 * * * * * * 1095 0 0 G 17 * * * * * 0 * * * * * * * * * * * * * * 17 0 * * * * * * 1095 0 0 G 18 * * * * * 0 * * * * * * * * * * * * * * 18 0 * * * * * * 1095 0 0 V 19 * * * * * * * * * * * * * * * * * 0 * * 19 0 * * * * * * 1095 0 0 A 20 0 * * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 1095 0 0 V 21 * * * * * * * * * * * * * * * * * 0 * * 21 0 * * * * * * 1095 0 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 1095 0 0 V 23 * * * * * * * 1000 * * * * * * * * * 1000 * * 23 0 * * * * * * 1095 0 0 V 24 * * * * * * * * * * * * * * * * * 0 * * 24 0 * * * * * * 1095 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 1095 0 0 L 26 * * * * * * * * * 0 * * * * * * * * * * 26 0 * * * * * * 1095 0 0 L 27 * * * * * * * * * 0 * * * * * * * * * * 27 0 * * * * * * 1095 0 0 V 28 * * * * * * * * * * * * * * * * * 0 * * 28 0 * * * * * * 1095 0 0 L 29 * * * * * * * * * 0 * * * * * * * * * * 29 0 * * * * * * 1095 0 0 A 30 0 * * * * * * * * * * * * * * * * * * * 30 0 * * * * * * 1095 0 0 G 31 * * * * * 0 * * * * * * * * * * * * * * 31 0 * * * * * * 1095 0 0 V 32 * * * * * * * 1000 * * * * * * * * * 1000 * * 32 0 * * * * * * 1095 0 0 G 33 * * * * * 0 * * * * * * * * * * * * * * 33 0 * * * * * * 1095 0 0 F 34 * * * * 1000 * * * * 1000 * * * * * * * * * * 34 0 * * * * * * 1095 0 0 F 35 * * * * 0 * * * * * * * * * * * * * * * 35 0 * * * * * * 1095 0 0 I 36 * * * * * * * 0 * * * * * * * * * * * * 36 0 * * * * * * 1095 0 0 H 37 * * * * * * 0 * * * * * * * * * * * * * 37 0 * * * * * * 1095 0 0 R 38 * * * * * * * * * * * * * * 0 * * * * * 38 0 * * * * * * 1095 0 0 R 39 * * * * * * * * * * * * * * 0 * * * * * 39 0 * * * * * * 1000 0 0 R 40 * * * * * * * * * * * * * * 0 * * * * * 40 0 * * * * * * 1000 0 0 K 41 * * * * * * * * 0 * * * * * * * * * * * 41 0 * * 0 * * * 1000 0 0 //