HHsearch 1.5 NAME c2k8hA_ FAM FILE c2k8hA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2k8hA_.a3m DATE Sat Aug 28 17:48:40 2010 LENG 102 match states, 102 columns in multiple alignment FILT 109 out of 611 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.8 EVD 0.4274 0.0293 SEQ >ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEETTSCCEEEEECTTSSHHHHHHHHHHHHTCCSSSCEEESSSCBCCSSSHHHHHHCSSEEEEEEECCCC CC >sa_dssp EEEEEEEEDEEDDEDEEEEEEEDEDEBCADACCEEDEDCEEECDBBDAACEBBDDBBEEDEDDEECCDADCEECDCCBBCDACEECEEDEADACBDEEDE EE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEEECCEEECCCCCHHHCCCCCCCEEEEEEECC CC >ss_conf 9888889875577544456777787599999849998999996699828999999998729997777999787798003657887989998999996227 99 >Consensus xsxxgxxxxxxxxxxxexxxxxxxxxIxIxvkxxxgxxxxxxixxxxtvxxlxxxxxxxxxixxxxxxlxfxGxxLxxxxTxxxxxlxdgdxIxvxxxxx gg >c2k8hA_ MSNNGGEPSNNGGEGAEGTCKEETALVAVKVVNADGAEMFFRIKSRTALKKLIDTYCKKQGISRNSVRFLFDGTPIDETKTPEELGMEDDDVIDAMVEQT GG >UniRef50_B6H5R6(294-388:388) Pc14g00880 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H5R6_PENCW E=9e-06 s/c=0.54 id=18% cov=87% ---------DNPPTKSQSPEDDQGEPMKLILRSPGYDDFRIKARQTTLISRLISAFRNKQNISVDRDIFlLFDGDKLDPDSSLGDYDIDNLDLVDVQI-- --- >UniRef50_A8IYN0(92-166:639) Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IYN0_CHLRE E=0.0006 s/c=0.60 id=16% cov=44% -----------------------------------------------PLSDVVKAFCRALGEETGFSDLYHGGIALDLDASPASIGLKSGE--------- -- >UniRef50_B7FW51(20-120:268) Ubiquitin-like protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FW51_PHATR E=2e-13 s/c=0.76 id=18% cov=100% ISPWGGQVPHA-PRTALASVLSVRGGMQLFVKTLTGKTVSIEVEEGESIEEVKAKIAEKEGIPAEQQRLIFGGQQLQDAKTLDDYDVGDDATLHLVLRLR GG >UniRef50_A7SL98(162-243:549) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SL98_NEMVE E=1e-06 s/c=0.66 id=19% cov=78% --------------NEESACSSVDREIHLKIRTASGIK-RFSLKAIEKFESVIEELAAQEGVDKKNILLSLRDQNINPDDTPLRVGATVADIIE------ -- >UniRef50_Q7S928(451-542:550) Predicted protein n=2 Tax=Sordariaceae RepID=Q7S928_NEUCR E=6e-05 s/c=0.53 id=17% cov=90% -SGTGVSGANGWSRGGSEAAEVKKTKIKVVLKAKDLQPLKIAVYEDTPVSTMVQVFRKQRDIKPEQtVVIQFDGEELNENMLVGAMDIERDET------- --- >UniRef50_C4B8W8(84-175:765) Radial spoke protein CMUB116 n=17 Tax=Metazoa RepID=C4B8W8_CIOIN E=0.0005 s/c=0.49 id=14% cov=75% ----------EASKAENEVTEEKEPTVTVKFQLvPSKEVITVATPLNVTIQQLSMQLSSDVKVPASLLHFSYEGKSVDPETTLKDLG------------- --- >UniRef50_A5K4X9(116-214:869) Ubiquitin domain containing protein n=1 Tax=Plasmodium vivax RepID=A5K4X9_PLAVI E=3e-06 s/c=0.54 id=18% cov=78% ----------------KGEKPNGHTHIYVRVKTNDcnNSTIKCKIEKNITVKKLKKSLRKILHSGEDEYRVIYRGRLLKDVDVLAKYNITFNDVLYA--- ---- >UniRef50_B9H1H2(72-163:260) Predicted protein (Fragment) n=3 Tax=rosids RepID=B9H1H2_POPTR E=0.0001 s/c=0.52 id=9% cov=34% -------------------------------------------------------------VPVKRLVLQSNGAELQDHQSLHECELKYNSEISV----- -- >UniRef50_B3S315(99-201:210) Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3S315_TRIAD E=1e-06 s/c=0.53 id=15% cov=97% ISNNGSDEEDSNHLIPEKQDQNIDDiddkfKFSIKLRLSSSKEEKLRVHNSQTILQAKRHLCDIIGVEPHQQRWYFYGRKLEDKMKIEDSKLSNGYVVQV VTD---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1429 * 2499 1147 * * * * * * * * * 1 0 * * * * * * 3598 0 0 S 2 * * * * * * * * 3512 * * * * * * 268 3607 * * * 2 0 * * * * * * 5283 0 0 N 3 * * 3727 3929 * 3697 * * 3951 * * 1468 2806 * * 2819 * 3816 * * 3 0 * * * * * * 5617 0 0 N 4 * * * * * * 3820 * * * 3796 2846 2217 * 2284 3715 2809 * 3667 * 4 0 * * * * * * 5617 0 0 G 5 * * * * * 604 * * * * * 4221 * * * 2794 * 3450 * 4238 5 0 * * * * * * 6433 0 0 G 6 2819 * 4618 4753 * 2580 4595 * * * * * 4491 4649 2998 1671 * 4369 * * 6 0 * * * * * * 6730 0 0 E 7 * * 2168 2330 * 4368 * * 4649 * * 4426 3503 3485 * 2550 3387 * * * 7 0 * * * * * * 6730 0 0 P 8 3600 * * 4239 * 2486 * * * * * * 950 * * 3644 * 3499 * * 8 0 * * * * * * 6730 0 0 S 9 3601 * * 4298 * 4538 * * 4581 4667 5029 3486 2334 4628 4865 2826 3002 3578 * * 9 0 * * * * * * 6836 0 0 N 10 3291 * 2347 3940 * 4641 4796 * * 4868 * 2521 * * 3869 2010 4843 * * * 10 0 * * * * * * 7033 0 0 N 11 2551 * 3345 3910 * 3344 * * 2870 * * 2921 4850 5165 4979 2977 4905 4554 * * 11 50 * 4873 * * * * 7133 0 0 G 12 2843 * * * * 1964 * * 3079 4831 * 4625 3429 4137 * 3339 3390 4897 4924 * 12 0 * * * * 0 * 7399 0 1000 G 13 * * 3934 * * 2882 4680 * * 5272 3884 * 1754 5382 5211 2408 3666 4273 * * 13 0 * * * * * * 7444 0 0 E 14 4170 * 3637 2822 * 4153 * 5015 2650 3344 * * * * 2351 3688 5039 3762 * * 14 0 * * * * * * 7444 0 0 G 15 2290 * 4146 4578 * 2546 * 4864 3630 5418 * 2884 4410 * 4306 4390 3227 * * * 15 34 5422 * 3170 170 * * 7541 1000 0 A 16 3332 * 4929 2242 * 3379 * * * 4954 * 4252 3559 3124 * 2823 3829 3957 * * 16 37 * 5299 * * * * 7641 0 0 E 17 4183 * 4612 1359 * * * 5521 3778 5762 * 3893 5681 2704 5283 3116 * 5659 * * 17 0 * * * * 0 * 7655 0 1000 G 18 2960 * 3355 3025 * 2458 5565 * 4367 * * 5352 2312 5284 * 3254 5680 5411 * * 18 82 * 4177 * * * * 7833 0 0 T 19 3405 * 5676 4131 5682 2876 * 4921 * 5557 3835 4497 4078 2662 * 3525 3384 3253 * * 19 77 5197 5348 2000 415 * 0 7876 1000 2202 C 20 2842 3763 3494 4843 * 3637 * 4133 2224 5727 * * 5784 5018 4756 3337 4876 3758 * * 20 46 6010 6006 0 * 1897 451 7891 1000 2533 K 21 4663 * 3216 3346 * 4983 * 4638 3079 4005 * 5804 3443 3116 * 2404 3506 * * * 21 0 * * * * 1979 422 7959 0 2497 E 22 4739 6292 2795 1997 * 6307 * * 4545 5441 * 3613 2229 5777 * 3696 4617 5215 * 5745 22 64 4525 * 1927 440 1513 622 8070 2347 2151 E 23 3759 * 2570 2237 * 4458 4264 5821 3387 * 6352 3225 5238 4173 * 3709 6201 4517 * * 23 64 4516 * 1269 774 * 0 8129 2340 1698 T 24 4035 * 2890 2520 * 4595 5850 5541 5162 5885 * 2984 3996 6375 4055 3021 3744 5086 * 5948 24 21 6138 * 3000 193 * 0 8190 1000 1698 A 25 4617 * 2122 2447 * 3036 6522 4619 4690 * * 4217 4281 4448 3853 5437 4446 4937 * 6375 25 45 5011 * 2077 390 950 1052 8230 1812 1698 L 26 5408 * * 2786 6009 5699 3933 4906 2887 3080 5058 5398 4510 4578 3440 4112 3766 4519 * 4727 26 23 5968 * 0 * 0 * 8242 1000 1000 V 27 6070 * * * 4019 * * 809 6516 3288 4178 * * * * * * 2546 * 6264 27 50 4885 * 1398 688 * * 8197 2440 0 A 28 4951 6668 4295 3733 6346 * 5137 4100 3124 6420 * 3271 6431 4150 3996 3867 1985 5249 * 5336 28 20 6164 * 2322 322 * * 8197 1000 0 V 29 * * * * 6016 * * 1333 * 1590 6453 * * * * * * 2035 * * 29 17 6420 * 0 * * * 8197 1000 0 K 30 6586 * 6070 6793 5267 5239 4827 4724 1606 4738 5295 4143 * 5508 2795 3646 3305 5376 6744 6431 30 15 6562 * 0 * * * 8197 1000 0 V 31 * 6051 * * 4144 * * 2398 * 2222 6455 * * * * * 5196 1042 * * 31 39 5211 * 0 * * * 8197 1781 0 V 32 6164 * * 6508 * * 4248 5229 1717 4123 * 6066 * 3184 1796 5404 5880 3631 * * 32 102 4151 6346 2659 249 * * 8197 2986 0 N 33 4312 4034 2685 6242 5434 3084 6412 * 6517 3745 * 4099 5387 6626 * 2398 2656 * 5359 5914 33 59 5043 6660 566 1624 * 0 8175 2330 1000 A 34 4114 * 3573 4061 * 6256 6033 5158 3315 2865 6551 4783 3290 3310 3710 3523 6689 4173 * 5288 34 64 5577 5486 2982 195 957 1044 8180 1680 1621 D 35 6278 * 1960 3056 * 4872 4393 * 4582 5042 * 2174 * 4713 5512 2890 4667 * * * 35 96 4243 6433 1395 690 0 * 8208 3327 2510 G 36 4469 6289 4642 5665 * 1048 * 5294 5047 5651 * 3272 * 4822 4691 3332 * 6609 6360 5393 36 18 6312 * 1000 1000 0 * 8181 1000 1000 A 37 4180 * 3871 3261 * 4236 * 6207 2336 4474 * 5692 * 3126 2873 3227 4252 4930 * * 37 0 * * * * * * 8178 0 0 E 38 5053 * 4144 2546 5714 6207 4443 3922 3697 4524 * * 5045 4318 3588 3099 3332 3527 * 6556 38 87 6384 4420 0 * * * 8178 1000 0 M 39 5301 6255 6266 4662 3853 * 3259 2789 6403 3014 3991 6783 * * 6299 * 5751 2001 5958 3541 39 13 * 6806 * * 0 * 8151 0 2869 F 40 4569 * 4512 2810 4762 * 4894 5394 3468 4496 * 5567 6105 4965 2751 3086 3016 4307 * 4864 40 52 4807 * 0 * * 0 8186 2924 1000 F 41 5818 4832 * * 1829 * 6599 2728 6393 2670 4909 * * * 5118 * 6615 2258 * 4206 41 36 5332 * 524 1714 * 0 8222 1627 1000 R 42 4343 * 6146 3443 5575 6516 5657 * 1978 4963 5779 4028 4547 4066 3059 3631 3535 5954 * 5507 42 0 * * * * 0 * 8222 0 1000 I 43 3455 4854 * * * * * 1774 * 2725 3787 * * * * * 5178 1597 * * 43 0 * * * * * * 8182 0 0 K 44 4505 6057 3761 4264 5663 4355 4948 * 2384 6122 6298 4478 3630 5107 2358 3217 * * * 4711 44 26 6556 7085 0 * * * 8182 1000 0 S 45 3725 * 4330 4423 6793 5273 6108 * 2296 3487 3725 4459 2926 5156 3356 4596 5191 5547 * 5839 45 0 * * * * 0 * 8231 0 1000 R 46 4772 6822 2639 3669 6590 5775 5348 6290 3682 5581 6358 3074 * * 6004 2353 2453 6013 * 6595 46 0 * * * * * * 8182 0 0 T 47 3725 * 2850 3090 6605 * 5191 4895 6960 6125 4616 4930 * 3865 * 2868 2074 4990 5792 6901 47 11 7026 * 2000 415 * * 8182 1000 0 A 48 5841 * 5672 4325 * * * * 2486 5263 6118 5661 2915 6624 4775 3108 1399 * * * 48 0 * * * * * * 8443 0 0 L 49 4699 6537 * * 2583 * * 2179 * 2486 4192 * * * * * * 1601 * * 49 0 * * * * * * 8443 0 0 K 50 3010 5864 4053 2967 6540 3103 6161 6442 4328 4996 5561 6901 6746 3578 3106 2482 5714 * * * 50 0 * * * * * * 8443 0 0 K 51 5306 * 3463 3065 6251 6556 6772 3702 1923 * * 4589 * 2815 4144 4343 4003 4669 * * 51 0 * * * * * * 8342 0 0 L 52 6234 * * * 3657 * * 3345 * 901 4807 6077 * * * * 6237 2252 * * 52 0 * * * * * * 8281 0 0 I 53 5546 * * 6712 3076 * 5196 3219 1334 3442 3675 6656 * 5345 5496 6415 5585 4349 * 6559 53 0 * * * * * * 8281 0 0 D 54 3469 6621 3241 2695 * 4091 6567 5719 3280 5039 5556 3737 * 4036 3038 3407 5780 5247 * * 54 0 * * * * * * 8281 0 0 T 55 2515 6229 4495 4237 4864 * 4658 4217 3273 3526 3738 6883 * 3674 3773 4283 4768 3960 * 6778 55 0 * * * * * * 8281 0 0 Y 56 5053 5829 * * 2314 * * 2067 * 2847 5399 * * * * * 6451 3532 * 1988 56 12 * 6958 * * * * 8281 0 0 C 57 2364 2219 * 3691 5510 * 6497 * 5186 3831 7027 * * 3333 3686 2806 * 5962 * 4673 57 31 5560 * 1925 441 * 0 8275 1640 1000 K 58 3260 * 3120 2213 * 6509 5512 6257 2530 5343 6628 4209 * 3418 4542 4121 4225 6722 * * 58 38 5265 * 1415 678 * 0 8275 1726 1000 K 59 5364 * 4531 2775 6884 * 4839 4866 2330 3820 4500 5897 * 3624 2288 6043 6892 4645 * 5125 59 0 * * * * 0 * 8276 0 1000 Q 60 4050 5383 5012 3593 3816 * 4081 4873 3781 2786 5441 5875 5191 4848 4965 4163 2912 3627 * 5965 60 44 5042 * 2724 237 * * 8282 1669 0 G 61 5715 6127 4162 4063 * 1435 4323 * 2947 6264 6308 2703 5993 6780 5513 4579 * 5394 * 6641 61 16 6533 * 0 * * * 8282 1000 0 I 62 4510 5205 6123 5392 * 5114 6241 1714 4877 2482 6561 * * 6485 * 5568 5411 2018 5836 * 62 55 5790 5705 0 * * * 8291 1883 0 S 63 3817 6474 2739 2963 * 5262 * 5259 4878 5836 * 4424 1938 4561 5557 3216 4717 5692 * * 63 24 7042 6761 0 * * 0 8270 1000 1776 R 64 2985 6510 5382 4405 4911 6856 * 4525 4010 3993 * * 2503 5211 2989 4353 3725 3248 * 5493 64 47 4974 * 1548 604 589 1578 8266 2087 2307 N 65 4305 * 2938 2275 6988 4331 4114 * 3015 * * 2842 6502 5131 4972 3306 4705 6258 * 6649 65 52 4813 * 0 * 0 * 8289 2828 1000 S 66 4443 * 3651 3138 5691 5902 6762 6356 3474 4828 7000 3361 * 2685 3018 3180 4387 5131 * 7099 66 31 5565 * 0 * * * 8291 1805 0 V 67 4917 5888 6943 * 4113 3908 * 2746 * 2592 3809 * 5615 2125 * * 5805 2920 * 4986 67 0 * * * * * * 8291 0 0 R 68 6580 5603 * 6123 * 6553 5291 3735 2659 4259 5533 * * 4918 1839 4586 3704 2972 5376 5130 68 0 * * * * * * 8291 0 0 F 69 * * * * 1772 * * 3879 * 903 4052 * * * * * * 5015 6240 * 69 23 5977 * 519 1726 * * 8291 1712 0 L 70 4962 5776 6674 6512 4580 * * 2096 4656 3336 4468 * * 4130 * 2806 3327 3429 5426 4227 70 34 5415 * 1842 472 * * 8291 1786 0 F 71 * 4312 6310 * 1342 * 3837 6580 5411 3262 * * * * * 5291 5971 6468 5619 1936 71 0 * * * * * * 8291 0 0 D 72 4495 5697 1999 3542 * 4313 5547 * 3725 5637 5881 2854 * 3551 3162 5775 6774 7065 6303 4915 72 25 6748 7047 1000 1000 * * 8291 1000 0 G 73 7005 * 3245 6590 * 358 5408 * * * * 5766 * 6906 5541 6885 5962 * * * 73 0 * * * * 0 * 8288 0 1000 T 74 7261 * 2881 3568 * * * 5210 2348 5270 5212 4715 * 2972 2299 4579 4239 5604 * 6259 74 15 6587 * 0 * * * 8291 1000 0 P 75 4647 4948 5220 3383 5201 6616 5717 3261 3631 3745 5692 6280 3635 4602 2583 5336 4074 3773 6511 * 75 0 * * * * * * 8292 0 0 I 76 * 6743 * * 4900 * * 2195 * 794 3913 * * * 6327 * * 3585 * * 76 21 6090 * 420 1985 * * 8292 1658 0 D 77 4497 * 2600 2891 5838 5458 5790 6571 2652 5523 5971 3424 4890 4492 4338 3580 4286 6481 6789 6105 77 43 5097 * 731 1331 * * 8292 2291 0 E 78 * * 1727 3554 * 3110 5846 4743 4446 4731 * 2940 2666 6255 * 5288 6616 5513 * * 78 0 * * * * * * 8292 0 0 T 79 4957 5726 2511 4385 5407 4464 3559 * 3970 * * 2282 * 4525 6327 3797 3071 6288 * 4545 79 12 6863 * 0 * * * 8292 1000 0 K 80 4225 6578 2606 3196 6516 4780 4249 6020 2753 5760 4426 4423 * 3182 4782 3797 4669 5632 6731 * 80 35 5363 * 949 1052 * * 8231 2441 0 T 81 5226 5987 * 6345 * * * 6645 4272 4674 6831 6682 6488 6533 6079 3383 625 5313 * 5661 81 0 * * * * * * 8231 0 0 P 82 4100 * * * 6952 * * 3109 * 1558 4359 * 1731 * * * * 2966 * * 82 14 6679 * 0 * * * 8224 1000 0 E 83 2513 * 3963 2815 6253 3788 5730 6660 3580 4886 6324 4202 * 3634 5203 2632 6966 6459 * 4983 83 0 * * * * * * 8224 0 0 E 84 5102 * 1533 3115 4855 5699 * 6277 6303 * 4924 5615 * 3625 6295 2469 3860 7744 * 5087 84 0 * * * * * * 8224 0 0 L 85 3523 5158 * 5569 5534 * * 4288 * 1824 4987 6660 * 5501 5174 4981 5734 5594 * 1530 85 0 * * * * * * 8224 0 0 G 86 * * 2397 3588 * 1418 5637 6580 3406 * * 2548 * * 5615 6579 * 7080 * 5745 86 0 * * * * * * 8224 0 0 M 87 6300 6110 * * 6321 * * 1742 6585 1248 2963 * * * * * * 3495 6247 * 87 0 * * * * * * 8231 0 0 E 88 * * 5072 1775 * 4686 4613 5012 2994 4725 * 3837 6432 2847 3868 4060 4507 6498 * * 88 0 * * * * * * 8048 0 0 D 89 6841 * 1285 4121 6261 6431 5149 6260 4666 * * 2899 4213 6304 4651 3303 5176 4956 6627 7255 89 0 * * * * * * 8055 0 0 D 90 4777 6112 2951 3240 6769 1016 4777 * 6875 5892 6643 3603 * 7013 5700 5616 * 6794 * * 90 0 * * * * * * 8043 0 0 D 91 3728 5826 930 4729 6625 6389 3903 * * * 5345 5539 * 5105 * 3157 5468 5493 * 5428 91 0 * * * * * * 8009 0 0 V 92 4565 5248 * 3596 4531 * * 2551 5002 4178 4060 * 6590 6201 6713 5038 1982 2545 * * 92 0 * * * * * * 8011 0 0 I 93 * * * * * * * 837 * 2559 6367 6408 * * * * * 2020 * * 93 0 * * * * * * 7999 0 0 D 94 * * 1930 1928 4941 * 3086 4350 * * * 5716 * 3789 * 3619 3848 * * 4903 94 0 * * * * * * 7825 0 0 A 95 2788 5082 * * 4022 * * * * 2819 3980 * * * * 5980 5811 982 * 5720 95 0 * * * * * * 7645 0 0 M 96 3427 * * * 2661 * 3125 4443 5392 3214 4766 5521 * 3548 6014 5727 5090 2842 * 3191 96 40 5207 * 0 * * * 7339 1000 0 V 97 * * * 5376 * * * 2847 * 2283 * 5720 4005 4375 3327 * 2873 2058 * 5282 97 0 * * * * * * 7154 0 0 E 98 * * 2010 4152 * 5316 4907 * 3544 * * 5811 5168 2860 2142 4957 4054 4353 * * 98 0 * * * * * * 6923 0 0 Q 99 * * * 4768 * * * * * 2898 3839 * 3113 998 4724 4431 4881 5339 * * 99 0 * * * * * * 6431 0 0 T 100 * * * * * * * 4603 * 3362 * 4007 4146 * 1492 4109 3452 2071 * * 100 0 * * * * * * 5777 0 0 G 101 3231 * * * * 273 * * * * * * * * * * 3928 * * * 101 0 * * * * * * 5566 0 0 G 102 * * * * * 0 * * * * * * * * * * * * * * 102 0 * * 0 * * * 5106 0 0 //