HHsearch 1.5 NAME c2jydA_ FAM FILE c2jydA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2jydA_.a3m DATE Wed Jan 9 17:55:36 2013 LENG 46 match states, 46 columns in multiple alignment FILT 93 out of 97 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.7 EVD 0.5076 3.3851 SEQ >ss_dssp CCSCBTTBTTSCSCSSCCSBSCSSSSSSBCSSTTTCTTTTSSCSCC >sa_dssp EEECCEDDDECABBDCBDADCCEEEEEECBDBDEAABDCEDECEEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCC >ss_conf 9743243333477888764240257666543002277002210169 >Consensus gxxxxxxxxxxCPtpGCdGxGHvxGxyxxHrsxsgCPxaxxxxxrx >c2jydA_ GSMAAHSADLKCPTPGCDGSGHITGNYASHRSLSGCPRAKKSGLRV >UniRef50_C4QKB1(96-138:591) Myelin transcription factor 1, myt1, putative n=1 Tax=Schistosoma mansoni RepID=C4QKB1_SCHMA E=3e-13 s/c=1.77 id=50% cov=96% --LALYHQTLHCPTPGCTGRGHVNNNRSSHRSFSGCPLASRNRSR- >UniRef50_Q17LV8(566-603:766) Myelin transcription factor 1, myt1 n=2 Tax=Culicini RepID=Q17LV8_AEDAE E=6e-05 s/c=1.28 id=50% cov=70% ---------FQCQTPGCDGNGHIDGTFSTHRTTASCPTAQ------ >UniRef50_UPI0001924AF5(442-486:648) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001924AF5 E=7e-05 s/c=1.08 id=38% cov=87% ---SGYESDILCKTIGCRGIGHIKGaKYTTHHTSFGCPYTIQN---- >UniRef50_C4QKB1(50-90:591) Myelin transcription factor 1, myt1, putative n=1 Tax=Schistosoma mansoni RepID=C4QKB1_SCHMA E=2e-09 s/c=1.56 id=48% cov=91% GSKKDRNTEGRCPIRDCDGTGHATGLYSYHRSVSGCPRKDR----- >UniRef50_UPI0001793686(393-430:662) PREDICTED: similar to chameau CG5229-PA, partial n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793686 E=9e-07 s/c=1.44 id=31% cov=85% -------EERLCPVNGCDSLGHLNGLYERHFTSEACPMYHRLTIK- >UniRef50_UPI0000E49ECF(165-203:504) PREDICTED: similar to MYST histone acetyltransferase 2 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49ECF E=3e-10 s/c=1.69 id=46% cov=80% --LKSENVELRCPVPGCDSRGHFTGKFTKHRTLWGCPL-------- >UniRef50_B7PTD5(817-861:1053) Lethal(3)malignant brain tumor, putative n=1 Tax=Ixodes scapularis RepID=B7PTD5_IXOSC E=3e-08 s/c=1.32 id=44% cov=89% --VGANALPGTCPTPGCTGLGHVKGpMFATHHSAYGCPYSKEN---- >UniRef50_Q4RI66(562-604:879) Chromosome 8 SCAF15044, whole genome shotgun sequence. (Fragment) n=8 Tax=Clupeocephala RepID=Q4RI66_TETNG E=3e-07 s/c=1.30 id=40% cov=87% ---AVAAPGQGCPTPGCNGVGHIRGpRYGTHYTQVSCPYSEIN---- >UniRef50_A7S4M8(189-234:929) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S4M8_NEMVE E=2e-11 s/c=1.53 id=49% cov=102% GMAASIQELIGCPTPRCDGKGHVNGRFASHRSVYGCPNANKATRRM # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2138 0 0 S 2 3255 * * * * * * * 2266 3252 2922 * 2952 * * 1638 * * * * 2 0 * * * * * * 2255 0 0 M 3 4416 * * * * 4446 * 4231 3902 1308 3111 * 3287 * * * * 2599 * * 3 0 * * * * * * 2659 0 0 A 4 1250 * * 3102 * 4192 * * 3019 * * * * 5413 4819 2408 4727 * * * 4 0 * * * * * * 2859 0 0 A 5 1950 * 4429 * * 3251 * * * 3387 3675 * * * * 2206 3779 2986 * * 5 0 * * * * * * 2800 0 0 H 6 3534 5370 4137 2703 * * 2271 5142 4013 * * 3590 * 6059 4649 3598 4860 * * 2981 6 0 * * * * * * 2737 0 0 S 7 2428 * * 2280 * * 5262 5360 3049 * * 3341 5065 4429 * 2198 4501 * * * 7 0 * * * * * * 2784 0 0 A 8 5068 6000 5462 2189 * * * * 3462 5154 * 4811 3311 2086 4727 3878 3553 5020 * * 8 0 * * * * * * 2743 0 0 D 9 * * 3308 1063 * 4388 * 3665 4880 4307 * 4634 4094 4380 * 5840 5837 5187 * * 9 0 * * * * * * 2756 0 0 L 10 5678 * * * 4228 4655 * 2857 4299 1238 4388 5917 4493 4301 3824 6444 6563 5472 * * 10 74 4314 * 0 * * * 2819 1531 0 K 11 6283 * * 4607 * 3411 4629 * 1313 4385 * * * 3717 2392 3799 5452 * * * 11 29 5641 * 1162 854 * * 2823 1229 0 C 12 * 0 * * * * * * * * * * * * * * * * * * 12 0 * * * * * * 2763 0 0 P 13 * * * * * * * * 5684 * * * 135 4963 * * 4731 * * * 13 0 * * * * * * 2763 0 0 T 14 * * * * * * * 3241 * 4054 6283 * * * * * 477 3282 * * 14 0 * * * * * * 2763 0 0 P 15 4080 * * 3696 * * * 5150 * 6628 6340 4664 493 * 5910 6275 * 4889 * * 15 0 * * * * * * 2763 0 0 G 16 * * 5268 * * 181 * * * * 6275 * * * 4560 6105 5511 * * * 16 0 * * * * * * 2763 0 0 C 17 * 0 * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 2763 0 0 D 18 * * 894 * * * 6176 * 4246 * * 2748 * 6347 3385 4736 3736 5259 * * 18 0 * * * * * * 2763 0 0 G 19 * * * * * 194 * * * * * * * * * 2993 * * * * 19 0 * * * * * * 2763 0 0 S 20 4956 * * * * * * 3294 4157 2876 4202 4963 * 4761 3512 1719 3541 4217 * 5698 20 0 * * * * * * 2763 0 0 G 21 * * * * * 0 * * * * * * * * * * * * * * 21 0 * * * * * * 2763 0 0 H 22 * * * * * * 0 * * * * * * * * * * * * * 22 0 * * * * * * 2763 0 0 I 23 3478 * * * 4950 * * 1821 6275 3728 4487 * * 6809 6795 3914 * 1405 * * 23 0 * * * * * * 2763 0 0 T 24 * * 4963 * * 4570 * * 2844 5333 * 2361 * 4272 4192 2658 1727 * * * 24 46 4996 * 1547 604 * * 2763 1367 0 G 25 5132 * * * * 223 * * * * * 4381 5793 6056 * 5698 6137 * * * 25 271 2547 * 0 * * * 2763 1969 0 N 26 * * * * * 6345 5793 * 1649 3069 6615 2153 * 5381 2777 4055 4533 5423 * * 26 0 * * * * * * 2763 0 0 Y 27 * * * * 1879 * 4048 * * 5109 * * * * 3348 5511 * * * 947 27 0 * * * * * * 2763 0 0 A 28 2210 * 4217 3765 5698 4724 * 5947 * 3991 * 3970 3923 6382 6048 2696 2349 6274 * * 28 0 * * * * * * 2763 0 0 S 29 5315 * 5511 * * 4095 4017 * 3316 * * * * * 4011 1553 1925 4335 * 5910 29 0 * * * * * * 2763 0 0 H 30 * * * * * * 0 * * * * * * * * * * * * * 30 0 * * * * * * 2763 0 0 R 31 * * * * 3285 * 2452 * * * * * * 5698 681 4889 * * * 4724 31 0 * * * * * * 2763 0 0 S 32 * 5801 * 4888 * * * * 5077 5103 5920 * * * 3923 659 2526 * * * 32 30 5600 * 3807 107 * * 2763 1000 0 L 33 2470 * * 5203 5511 * * 3317 * 1451 * * 5103 4176 * 4402 4184 3090 * * 33 0 * * * * * * 2763 0 0 S 34 4961 * * 3472 3891 5509 * 5600 4888 5258 * * * 4892 * 905 * 3989 6129 3993 34 14 6744 * 0 * * * 2763 1000 0 G 35 3472 5600 * * 5331 488 * * * * * * * * * 3089 * * * 4888 35 0 * * * * * * 2763 0 0 C 36 * 0 * * * * * * * * * * * * * * * * * * 36 0 * * * * * * 2763 0 0 P 37 * * * * * * * * * * * * 0 * * * * * * * 37 0 * * * * * * 2763 0 0 R 38 * * * * * * 5796 3226 * 1598 4679 4728 * * 2377 * 5013 6232 * 2113 38 0 * * * * * * 2875 0 0 A 39 634 * * * * * * * 4107 * * 4958 * * 6421 2690 5297 5084 * 4511 39 28 5687 * 0 * * * 2894 1000 0 K 40 2690 * 2445 2903 * 6162 3906 5292 3748 5337 6402 4533 4922 3348 4804 3970 4776 * * * 40 0 * * * * * * 2897 0 0 K 41 4391 * 4713 6093 6578 * 5879 4773 1864 6259 4296 * * 2964 1706 5509 * 4633 * * 41 0 * * * * * * 2813 0 0 S 42 4185 * * 4724 * 6594 6006 * * 4251 * 1029 5233 * 3206 2798 4722 5493 * * 42 0 * * * * * * 2838 0 0 G 43 4859 * * * * 3644 * * 1891 4444 4389 * * 2036 3618 4934 3144 * * 4289 43 0 * * * * * * 2692 0 0 L 44 * * * * * 3874 * 2655 3643 1912 4570 3213 * * 4253 2786 3646 * * * 44 0 * * * * * * 2723 0 0 R 45 4595 * * 4379 * * 5123 * 1436 * 5583 * * 4293 1183 * * * * * 45 0 * * * * * * 2737 0 0 V 46 * * * * * * * 2729 * 1573 1765 * * * * * * 2192 * * 46 0 * * 0 * * * 2139 0 0 //